RNA–Protein interactions for RNA: ENST00000481385.6

PHF3-204, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-204ENST00000481385 LHX3Q9UBR4 397 aa13.96□□□□□ -0.17
PHF3-204ENST00000481385 ARIH1Q9Y4X5 557 aaPredicted RBP13.96□□□□□ -0.17
PHF3-204ENST00000481385 ANKRD12Q6UB98 2062 aa13.96□□□□□ -0.18
PHF3-204ENST00000481385 PKMP14618 531 aaKnown RBP13.95□□□□□ -0.18
PHF3-204ENST00000481385 ZNF26P17031 533 aaPredicted RBP13.95□□□□□ -0.18
PHF3-204ENST00000481385 ATP6V1B2P21281 511 aa13.95□□□□□ -0.18
PHF3-204ENST00000481385 RHDQ02161 417 aa13.95□□□□□ -0.18
PHF3-204ENST00000481385 MTA1Q13330 715 aa13.95□□□□□ -0.18
PHF3-204ENST00000481385 NRF1Q16656 503 aa13.95□□□□□ -0.18
PHF3-204ENST00000481385 C18orf21Q32NC0 220 aaPredicted RBP13.95□□□□□ -0.18
PHF3-204ENST00000481385 HMBOX1Q6NT76 420 aa13.95□□□□□ -0.18
PHF3-204ENST00000481385 NCEH1Q6PIU2 408 aa13.95□□□□□ -0.18
PHF3-204ENST00000481385 CHST9Q7L1S5 443 aa13.95□□□□□ -0.18
PHF3-204ENST00000481385 CARNMT1Q8N4J0 409 aa13.95□□□□□ -0.18
PHF3-204ENST00000481385 TTC16Q8NEE8 873 aa13.95□□□□□ -0.18
PHF3-204ENST00000481385 PDZD8Q8NEN9 1154 aa13.95□□□□□ -0.18
PHF3-204ENST00000481385 ADCY4Q8NFM4 1077 aa13.95□□□□□ -0.18
PHF3-204ENST00000481385 OR6K2Q8NGY2 324 aa13.95□□□□□ -0.18
PHF3-204ENST00000481385 OR2T11Q8NH01 316 aa13.95□□□□□ -0.18
PHF3-204ENST00000481385 CNBD2Q96M20 576 aa13.95□□□□□ -0.18
PHF3-204ENST00000481385 TRAPPC9Q96Q05 1148 aa13.95□□□□□ -0.18
PHF3-204ENST00000481385 SARS2Q9NP81 518 aaKnown RBP13.95□□□□□ -0.18
PHF3-204ENST00000481385 TRPM5Q9NZQ8 1165 aa13.95□□□□□ -0.18
PHF3-204ENST00000481385 BCAP29Q9UHQ4 241 aa13.95□□□□□ -0.18
PHF3-204ENST00000481385 PCTPQ9UKL6 214 aa13.95□□□□□ -0.18
PHF3-204ENST00000481385 YIPF1Q9Y548 306 aa13.95□□□□□ -0.18
PHF3-204ENST00000481385 AP4S1Q9Y587 144 aa13.95□□□□□ -0.18
PHF3-204ENST00000481385 TCRBV3S1A0A5B6 114 aa13.95□□□□□ -0.18
PHF3-204ENST00000481385 ALPIP09923 528 aa13.95□□□□□ -0.18
PHF3-204ENST00000481385 CTPS1P17812 591 aa13.95□□□□□ -0.18
PHF3-204ENST00000481385 ZFP36L2P47974 494 aaKnown RBP13.95□□□□□ -0.18
PHF3-204ENST00000481385 NAIF1Q69YI7 327 aaPredicted RBP13.95□□□□□ -0.18
PHF3-204ENST00000481385 TMEM126BQ8IUX1 230 aa13.95□□□□□ -0.18
PHF3-204ENST00000481385 OVCA2Q8WZ82 227 aa13.95□□□□□ -0.18
PHF3-204ENST00000481385 LINGO1Q96FE5 620 aa13.95□□□□□ -0.18
PHF3-204ENST00000481385 IGSF21Q96ID5 467 aa13.95□□□□□ -0.18
PHF3-204ENST00000481385 ASB2Q96Q27 587 aa13.95□□□□□ -0.18
PHF3-204ENST00000481385 CDK15Q96Q40 435 aa13.95□□□□□ -0.18
PHF3-204ENST00000481385 C7orf72A4D263 438 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 ASPDHA6ND91 283 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 KLK8O60259 260 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 TBL1XO60907 577 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 PGM3O95394 542 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 ATP6V0D1P61421 351 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 TWF1Q12792 350 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 LIN52Q52LA3 116 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 MTX3Q5HYI7 312 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 ANKS6Q68DC2 871 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 HACD2Q6Y1H2 254 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 HERC6Q8IVU3 1022 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 MIER2Q8N344 545 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 ADAMTS19Q8TE59 1207 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 ZNF483Q8TF39 744 aaPredicted RBP13.94□□□□□ -0.18
PHF3-204ENST00000481385 CAPNS2Q96L46 248 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 MYRFLQ96LU7 910 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 TCF12Q99081 682 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 SDR39U1Q9NRG7 319 aaPredicted RBP13.94□□□□□ -0.18
PHF3-204ENST00000481385 SPATS2LQ9NUQ6 558 aaKnown RBP13.94□□□□□ -0.18
PHF3-204ENST00000481385 EPS15L1Q9UBC2 864 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 AFF4Q9UHB7 1163 aaKnown RBP13.94□□□□□ -0.18
PHF3-204ENST00000481385 EIF2B4Q9UI10 523 aaKnown RBP13.94□□□□□ -0.18
PHF3-204ENST00000481385 PCDHB9Q9Y5E1 797 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 BACE2Q9Y5Z0 518 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 ZNF839A8K0R7 811 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 PITPNM1O00562 1244 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 ABLIM3O94929 683 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 MYBPC1Q00872 1141 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 AMIGO2Q86SJ2 522 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 SATL1Q86VE3 508 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 ST13P4Q8IZP2 240 aaPredicted RBP13.94□□□□□ -0.18
PHF3-204ENST00000481385 SPDYE1Q8NFV5 336 aaPredicted RBP13.94□□□□□ -0.18
PHF3-204ENST00000481385 OR52B6Q8NGF0 335 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 ZNF461Q8TAF7 563 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 AUTS2Q8WXX7 1259 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 VPS33AQ96AX1 596 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 MRGBPQ9NV56 204 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 GPR45Q9Y5Y3 372 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 COL4A6Q14031 1691 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 A0A1B0GTW7 788 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 STX7O15400 261 aaKnown RBP13.94□□□□□ -0.18
PHF3-204ENST00000481385 HOXA2O43364 376 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 GREM1O60565 184 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 FESP07332 822 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 LBPP18428 481 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 GKP32189 559 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 ATN1P54259 1190 aaPredicted RBP13.94□□□□□ -0.18
PHF3-204ENST00000481385 RPL26P61254 145 aaKnown RBP13.94□□□□□ -0.18
PHF3-204ENST00000481385 TRAP1Q12931 704 aaKnown RBP13.94□□□□□ -0.18
PHF3-204ENST00000481385 SAMD4BQ5PRF9 694 aaKnown RBP13.94□□□□□ -0.18
PHF3-204ENST00000481385 KIAA1841Q6NSI8 718 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 FEM1AQ9BSK4 669 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 ADGRE3Q9BY15 652 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 TM6SF2Q9BZW4 377 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 COQ10BQ9H8M1 238 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 CMTM6Q9NX76 183 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 EGFL7Q9UHF1 273 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 TRMT6Q9UJA5 497 aaKnown RBP13.94□□□□□ -0.18
PHF3-204ENST00000481385 APPL1Q9UKG1 709 aa13.94□□□□□ -0.18
PHF3-204ENST00000481385 CNOT6Q9ULM6 557 aaKnown RBP13.94□□□□□ -0.18
PHF3-204ENST00000481385 RAB26Q9ULW5 256 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms