RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 ECEL1O95672 775 aa16.84■□□□□ 0.29
HSPG2-209ENST00000480900 EIF2S3P41091 472 aaKnown RBP16.84■□□□□ 0.29
HSPG2-209ENST00000480900 MLLT3P42568 568 aaPredicted RBP16.84■□□□□ 0.29
HSPG2-209ENST00000480900 CHRNA4P43681 627 aa16.84■□□□□ 0.29
HSPG2-209ENST00000480900 ERVPABLB-1P60509 514 aa16.84■□□□□ 0.29
HSPG2-209ENST00000480900 ANKRD20A2Q5SQ80 823 aa16.84■□□□□ 0.29
HSPG2-209ENST00000480900 ANKRD20A1Q5TYW2 823 aa16.84■□□□□ 0.29
HSPG2-209ENST00000480900 ANKRD20A3Q5VUR7 823 aa16.84■□□□□ 0.29
HSPG2-209ENST00000480900 ZDHHC20Q5W0Z9 365 aa16.84■□□□□ 0.29
HSPG2-209ENST00000480900 DARS2Q6PI48 645 aaKnown RBP16.84■□□□□ 0.29
HSPG2-209ENST00000480900 PHYKPLQ8IUZ5 450 aa16.84■□□□□ 0.29
HSPG2-209ENST00000480900 TTC30BQ8N4P2 665 aa16.84■□□□□ 0.29
HSPG2-209ENST00000480900 SLC25A41Q8N5S1 370 aa16.84■□□□□ 0.29
HSPG2-209ENST00000480900 TTC13Q8NBP0 860 aa16.84■□□□□ 0.29
HSPG2-209ENST00000480900 WDR36Q8NI36 951 aaKnown RBP16.84■□□□□ 0.29
HSPG2-209ENST00000480900 GLYATL1Q969I3 302 aa16.84■□□□□ 0.29
HSPG2-209ENST00000480900 HES6Q96HZ4 224 aa16.84■□□□□ 0.29
HSPG2-209ENST00000480900 TMEM74Q96NL1 305 aa16.84■□□□□ 0.29
HSPG2-209ENST00000480900 DCBLD2Q96PD2 775 aa16.84■□□□□ 0.29
HSPG2-209ENST00000480900 TSGA10Q9BZW7 698 aa16.84■□□□□ 0.29
HSPG2-209ENST00000480900 TRIM39Q9HCM9 518 aa16.84■□□□□ 0.29
HSPG2-209ENST00000480900 ASCL3Q9NQ33 180 aa16.84■□□□□ 0.29
HSPG2-209ENST00000480900 PCDHGA8Q9Y5G5 932 aa16.84■□□□□ 0.29
HSPG2-209ENST00000480900 ADGRG1Q9Y653 693 aa16.84■□□□□ 0.29
HSPG2-209ENST00000480900 CAPN6Q9Y6Q1 641 aa16.84■□□□□ 0.29
HSPG2-209ENST00000480900 KCNN4O15554 427 aa16.83■□□□□ 0.28
HSPG2-209ENST00000480900 ZW10O43264 779 aa16.83■□□□□ 0.28
HSPG2-209ENST00000480900 NUAK1O60285 661 aa16.83■□□□□ 0.28
HSPG2-209ENST00000480900 PTMAP06454 111 aaKnown RBP16.83■□□□□ 0.28
HSPG2-209ENST00000480900 CCKBRP32239 447 aa16.83■□□□□ 0.28
HSPG2-209ENST00000480900 GPR3P46089 330 aa16.83■□□□□ 0.28
HSPG2-209ENST00000480900 B4GALNT1Q00973 533 aa16.83■□□□□ 0.28
HSPG2-209ENST00000480900 EIF3IQ13347 325 aaKnown RBP16.83■□□□□ 0.28
HSPG2-209ENST00000480900 CHST15Q7LFX5 561 aaPredicted RBP16.83■□□□□ 0.28
HSPG2-209ENST00000480900 GLT6D1Q7Z4J2 308 aa16.83■□□□□ 0.28
HSPG2-209ENST00000480900 B3GNT8Q7Z7M8 397 aa16.83■□□□□ 0.28
HSPG2-209ENST00000480900 CCDC112Q8NEF3 446 aa16.83■□□□□ 0.28
HSPG2-209ENST00000480900 DTX3LQ8TDB6 740 aa16.83■□□□□ 0.28
HSPG2-209ENST00000480900 UBE2Q2Q8WVN8 375 aa16.83■□□□□ 0.28
HSPG2-209ENST00000480900 PATE1Q8WXA2 126 aa16.83■□□□□ 0.28
HSPG2-209ENST00000480900 SPATA13Q96N96 652 aa16.83■□□□□ 0.28
HSPG2-209ENST00000480900 PPP1R2P1Q96PQ5 205 aa16.83■□□□□ 0.28
HSPG2-209ENST00000480900 VPS35Q96QK1 796 aa16.83■□□□□ 0.28
HSPG2-209ENST00000480900 FAM118BQ9BPY3 351 aa16.83■□□□□ 0.28
HSPG2-209ENST00000480900 GORASP1Q9BQQ3 440 aa16.83■□□□□ 0.28
HSPG2-209ENST00000480900 STRADBQ9C0K7 418 aa16.83■□□□□ 0.28
HSPG2-209ENST00000480900 OR2AG1Q9H205 316 aa16.83■□□□□ 0.28
HSPG2-209ENST00000480900 THSD1Q9NS62 852 aa16.83■□□□□ 0.28
HSPG2-209ENST00000480900 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.83■□□□□ 0.28
HSPG2-209ENST00000480900 ATXN10Q9UBB4 475 aa16.83■□□□□ 0.28
HSPG2-209ENST00000480900 LHX6Q9UPM6 363 aa16.83■□□□□ 0.28
HSPG2-209ENST00000480900 AAR2Q9Y312 384 aaKnown RBP16.83■□□□□ 0.28
HSPG2-209ENST00000480900 PRKAB1Q9Y478 270 aa16.83■□□□□ 0.28
HSPG2-209ENST00000480900 PCYT1BQ9Y5K3 369 aaPredicted RBP16.83■□□□□ 0.28
HSPG2-209ENST00000480900 PIKFYVEQ9Y2I7 2098 aa16.82■□□□□ 0.28
HSPG2-209ENST00000480900 IGSF10Q6WRI0 2623 aa16.82■□□□□ 0.28
HSPG2-209ENST00000480900 CHUKO15111 745 aa16.82■□□□□ 0.28
HSPG2-209ENST00000480900 RRP8O43159 456 aaKnown RBP16.82■□□□□ 0.28
HSPG2-209ENST00000480900 ARHGAP6O43182 974 aa16.82■□□□□ 0.28
HSPG2-209ENST00000480900 GRID2O43424 1007 aa16.82■□□□□ 0.28
HSPG2-209ENST00000480900 KRT86O43790 486 aa16.82■□□□□ 0.28
HSPG2-209ENST00000480900 PPFIA2O75334 1257 aa16.82■□□□□ 0.28
HSPG2-209ENST00000480900 ACP5P13686 325 aa16.82■□□□□ 0.28
HSPG2-209ENST00000480900 ZNF8P17098 575 aaPredicted RBP16.82■□□□□ 0.28
HSPG2-209ENST00000480900 PSMB4P28070 264 aa16.82■□□□□ 0.28
HSPG2-209ENST00000480900 RBMS1P29558 406 aaKnown RBP16.82■□□□□ 0.28
HSPG2-209ENST00000480900 INHBCP55103 352 aa16.82■□□□□ 0.28
HSPG2-209ENST00000480900 PCBP4P57723 403 aaKnown RBP16.82■□□□□ 0.28
HSPG2-209ENST00000480900 KLF1Q13351 362 aaPredicted RBP16.82■□□□□ 0.28
HSPG2-209ENST00000480900 BIRC2Q13490 618 aa16.82■□□□□ 0.28
HSPG2-209ENST00000480900 PRPSAP1Q14558 356 aa16.82■□□□□ 0.28
HSPG2-209ENST00000480900 CLPPQ16740 277 aaPredicted RBP16.82■□□□□ 0.28
HSPG2-209ENST00000480900 C19orf48Q6RUI8 117 aa16.82■□□□□ 0.28
HSPG2-209ENST00000480900 LRRC69Q6ZNQ3 347 aa16.82■□□□□ 0.28
HSPG2-209ENST00000480900 ADGRG6Q86SQ4 1221 aa16.82■□□□□ 0.28
HSPG2-209ENST00000480900 BLOC1S5Q8TDH9 187 aa16.82■□□□□ 0.28
HSPG2-209ENST00000480900 HNRNPLLQ8WVV9 542 aaKnown RBP16.82■□□□□ 0.28
HSPG2-209ENST00000480900 PRR11Q96HE9 360 aaPredicted RBP16.82■□□□□ 0.28
HSPG2-209ENST00000480900 SLC46A1Q96NT5 459 aa16.82■□□□□ 0.28
HSPG2-209ENST00000480900 FICDQ9BVA6 458 aa16.82■□□□□ 0.28
HSPG2-209ENST00000480900 FOXP3Q9BZS1 431 aa16.82■□□□□ 0.28
HSPG2-209ENST00000480900 BPIFA1Q9NP55 256 aa16.82■□□□□ 0.28
HSPG2-209ENST00000480900 ARFGAP3Q9NP61 516 aa16.82■□□□□ 0.28
HSPG2-209ENST00000480900 IL17CQ9P0M4 197 aa16.82■□□□□ 0.28
HSPG2-209ENST00000480900 BPTFQ12830 3046 aa16.82■□□□□ 0.28
HSPG2-209ENST00000480900 B4GAT1O43505 415 aa16.81■□□□□ 0.28
HSPG2-209ENST00000480900 VEGFDO43915 354 aa16.81■□□□□ 0.28
HSPG2-209ENST00000480900 CPNE6O95741 557 aa16.81■□□□□ 0.28
HSPG2-209ENST00000480900 AGTP01019 485 aa16.81■□□□□ 0.28
HSPG2-209ENST00000480900 ADRA1AP35348 466 aa16.81■□□□□ 0.28
HSPG2-209ENST00000480900 SPAM1P38567 509 aa16.81■□□□□ 0.28
HSPG2-209ENST00000480900 ABCG1P45844 678 aa16.81■□□□□ 0.28
HSPG2-209ENST00000480900 FASLGP48023 281 aa16.81■□□□□ 0.28
HSPG2-209ENST00000480900 CLCNKAP51800 687 aa16.81■□□□□ 0.28
HSPG2-209ENST00000480900 ZFP36L1Q07352 338 aaKnown RBP16.81■□□□□ 0.28
HSPG2-209ENST00000480900 COL28A1Q2UY09 1125 aa16.81■□□□□ 0.28
HSPG2-209ENST00000480900 RANBP10Q6VN20 620 aa16.81■□□□□ 0.28
HSPG2-209ENST00000480900 SFRP1Q8N474 314 aa16.81■□□□□ 0.28
HSPG2-209ENST00000480900 CCDC110Q8TBZ0 833 aa16.81■□□□□ 0.28
HSPG2-209ENST00000480900 EPB41L5Q9HCM4 733 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms