RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 PEBP4Q96S96 227 aa15.9■□□□□ 0.14
DDX56-210ENST00000479440 AGAP2Q99490 1192 aa15.9■□□□□ 0.14
DDX56-210ENST00000479440 RIOK2Q9BVS4 552 aaKnown RBP15.9■□□□□ 0.14
DDX56-210ENST00000479440 TRIM55Q9BYV6 548 aa15.9■□□□□ 0.14
DDX56-210ENST00000479440 ACSS2Q9NR19 701 aa15.9■□□□□ 0.14
DDX56-210ENST00000479440 PCSK1NQ9UHG2 260 aa15.9■□□□□ 0.14
DDX56-210ENST00000479440 PCYT1BQ9Y5K3 369 aaPredicted RBP15.9■□□□□ 0.14
DDX56-210ENST00000479440 UTP20O75691 2785 aaKnown RBP15.89■□□□□ 0.13
DDX56-210ENST00000479440 PRPSAP2O60256 369 aa15.89■□□□□ 0.13
DDX56-210ENST00000479440 RNF8O76064 485 aa15.89■□□□□ 0.13
DDX56-210ENST00000479440 PEX11BO96011 259 aa15.89■□□□□ 0.13
DDX56-210ENST00000479440 ATP1A1P05023 1023 aaKnown RBP15.89■□□□□ 0.13
DDX56-210ENST00000479440 TYRP1P17643 537 aa15.89■□□□□ 0.13
DDX56-210ENST00000479440 HCAR3P49019 387 aa15.89■□□□□ 0.13
DDX56-210ENST00000479440 CDH6P55285 790 aa15.89■□□□□ 0.13
DDX56-210ENST00000479440 PTSQ03393 145 aa15.89■□□□□ 0.13
DDX56-210ENST00000479440 CHRNA6Q15825 494 aa15.89■□□□□ 0.13
DDX56-210ENST00000479440 UGT8Q16880 541 aa15.89■□□□□ 0.13
DDX56-210ENST00000479440 DPCR1Q3MIW9 517 aa15.89■□□□□ 0.13
DDX56-210ENST00000479440 MARC1Q5VT66 337 aa15.89■□□□□ 0.13
DDX56-210ENST00000479440 PPP1R2P3Q6NXS1 205 aa15.89■□□□□ 0.13
DDX56-210ENST00000479440 TMCO3Q6UWJ1 677 aa15.89■□□□□ 0.13
DDX56-210ENST00000479440 TICAM1Q8IUC6 712 aa15.89■□□□□ 0.13
DDX56-210ENST00000479440 TP53INP2Q8IXH6 220 aa15.89■□□□□ 0.13
DDX56-210ENST00000479440 OSGEPL1Q9H4B0 414 aa15.89■□□□□ 0.13
DDX56-210ENST00000479440 SAMSN1Q9NSI8 373 aaKnown RBP15.89■□□□□ 0.13
DDX56-210ENST00000479440 OGFRQ9NZT2 677 aa15.89■□□□□ 0.13
DDX56-210ENST00000479440 G3BP2Q9UN86 482 aaKnown RBP15.89■□□□□ 0.13
DDX56-210ENST00000479440 ZNF451Q9Y4E5 1061 aa15.89■□□□□ 0.13
DDX56-210ENST00000479440 PCDHGB7Q9Y5F8 929 aa15.89■□□□□ 0.13
DDX56-210ENST00000479440 A0A0J9YYE9 177 aa15.88■□□□□ 0.13
DDX56-210ENST00000479440 A0A0U1RQS6 177 aa15.88■□□□□ 0.13
DDX56-210ENST00000479440 H3BRJ5 948 aa15.88■□□□□ 0.13
DDX56-210ENST00000479440 EPHB6O15197 1021 aa15.88■□□□□ 0.13
DDX56-210ENST00000479440 FZD6O60353 706 aa15.88■□□□□ 0.13
DDX56-210ENST00000479440 MAFKO60675 156 aa15.88■□□□□ 0.13
DDX56-210ENST00000479440 MTA2O94776 668 aa15.88■□□□□ 0.13
DDX56-210ENST00000479440 VIPP01282 170 aa15.88■□□□□ 0.13
DDX56-210ENST00000479440 TRBC1P01850 177 aa15.88■□□□□ 0.13
DDX56-210ENST00000479440 CA4P22748 312 aa15.88■□□□□ 0.13
DDX56-210ENST00000479440 CLCNKAP51800 687 aa15.88■□□□□ 0.13
DDX56-210ENST00000479440 INPP5JQ15735 1006 aaPredicted RBP15.88■□□□□ 0.13
DDX56-210ENST00000479440 CPZQ66K79 652 aa15.88■□□□□ 0.13
DDX56-210ENST00000479440 TMEM26Q6ZUK4 368 aa15.88■□□□□ 0.13
DDX56-210ENST00000479440 SYVN1Q86TM6 617 aa15.88■□□□□ 0.13
DDX56-210ENST00000479440 HPS6Q86YV9 775 aa15.88■□□□□ 0.13
DDX56-210ENST00000479440 MCOLN2Q8IZK6 566 aa15.88■□□□□ 0.13
DDX56-210ENST00000479440 AGPAT1Q99943 283 aa15.88■□□□□ 0.13
DDX56-210ENST00000479440 GPR87Q9BY21 358 aa15.88■□□□□ 0.13
DDX56-210ENST00000479440 CARD9Q9H257 536 aa15.88■□□□□ 0.13
DDX56-210ENST00000479440 PDE7BQ9NP56 450 aa15.88■□□□□ 0.13
DDX56-210ENST00000479440 POT1Q9NUX5 634 aa15.88■□□□□ 0.13
DDX56-210ENST00000479440 PARVAQ9NVD7 372 aa15.88■□□□□ 0.13
DDX56-210ENST00000479440 CWC15Q9P013 229 aaKnown RBP15.88■□□□□ 0.13
DDX56-210ENST00000479440 MAP10Q9P2G4 905 aa15.88■□□□□ 0.13
DDX56-210ENST00000479440 TCP11X1B4DZS4 312 aa15.87■□□□□ 0.13
DDX56-210ENST00000479440 GRID2O43424 1007 aa15.87■□□□□ 0.13
DDX56-210ENST00000479440 DPM1O60762 260 aa15.87■□□□□ 0.13
DDX56-210ENST00000479440 PDHA1P08559 390 aa15.87■□□□□ 0.13
DDX56-210ENST00000479440 ATP1A3P13637 1013 aa15.87■□□□□ 0.13
DDX56-210ENST00000479440 PTPN4P29074 926 aa15.87■□□□□ 0.13
DDX56-210ENST00000479440 SERPINB6P35237 376 aa15.87■□□□□ 0.13
DDX56-210ENST00000479440 ARL4AP40617 200 aa15.87■□□□□ 0.13
DDX56-210ENST00000479440 CAPZBP47756 277 aa15.87■□□□□ 0.13
DDX56-210ENST00000479440 LEPRP48357 1165 aaKnown RBP15.87■□□□□ 0.13
DDX56-210ENST00000479440 MRPL49Q13405 166 aaKnown RBP15.87■□□□□ 0.13
DDX56-210ENST00000479440 EIF2S3LQ2VIR3 472 aaKnown RBP15.87■□□□□ 0.13
DDX56-210ENST00000479440 CACHD1Q5VU97 1274 aa15.87■□□□□ 0.13
DDX56-210ENST00000479440 PAPD7Q5XG87 772 aaKnown RBP15.87■□□□□ 0.13
DDX56-210ENST00000479440 ACAD10Q6JQN1 1059 aa15.87■□□□□ 0.13
DDX56-210ENST00000479440 PRR7Q8TB68 274 aa15.87■□□□□ 0.13
DDX56-210ENST00000479440 ZDHHC12Q96GR4 267 aa15.87■□□□□ 0.13
DDX56-210ENST00000479440 PLEKHG4BQ96PX9 1271 aa15.87■□□□□ 0.13
DDX56-210ENST00000479440 MLXIPLQ9NP71 852 aa15.87■□□□□ 0.13
DDX56-210ENST00000479440 NT5MQ9NPB1 228 aa15.87■□□□□ 0.13
DDX56-210ENST00000479440 SLAMF7Q9NQ25 335 aa15.87■□□□□ 0.13
DDX56-210ENST00000479440 HAUS2Q9NVX0 235 aa15.87■□□□□ 0.13
DDX56-210ENST00000479440 ARGFXA6NJG6 315 aa15.86■□□□□ 0.13
DDX56-210ENST00000479440 NUAK1O60285 661 aa15.86■□□□□ 0.13
DDX56-210ENST00000479440 CLDN1O95832 211 aa15.86■□□□□ 0.13
DDX56-210ENST00000479440 XRCC1P18887 633 aaPredicted RBP15.86■□□□□ 0.13
DDX56-210ENST00000479440 COL8A1P27658 744 aa15.86■□□□□ 0.13
DDX56-210ENST00000479440 TNFRSF8P28908 595 aa15.86■□□□□ 0.13
DDX56-210ENST00000479440 MIPP30301 263 aa15.86■□□□□ 0.13
DDX56-210ENST00000479440 UBE2HP62256 183 aa15.86■□□□□ 0.13
DDX56-210ENST00000479440 RPS15P62841 145 aaKnown RBP15.86■□□□□ 0.13
DDX56-210ENST00000479440 PDE1BQ01064 536 aa15.86■□□□□ 0.13
DDX56-210ENST00000479440 CHAF1BQ13112 559 aa15.86■□□□□ 0.13
DDX56-210ENST00000479440 MAMLD1Q13495 774 aa15.86■□□□□ 0.13
DDX56-210ENST00000479440 TUBB3Q13509 450 aa15.86■□□□□ 0.13
DDX56-210ENST00000479440 BECN1Q14457 450 aa15.86■□□□□ 0.13
DDX56-210ENST00000479440 HENMT1Q5T8I9 393 aaKnown RBP15.86■□□□□ 0.13
DDX56-210ENST00000479440 RBM12BQ8IXT5 1001 aaKnown RBP15.86■□□□□ 0.13
DDX56-210ENST00000479440 AOPEPQ8N6M6 819 aa15.86■□□□□ 0.13
DDX56-210ENST00000479440 NEK11Q8NG66 645 aa15.86■□□□□ 0.13
DDX56-210ENST00000479440 KLHL6Q8WZ60 621 aa15.86■□□□□ 0.13
DDX56-210ENST00000479440 PCMTD1Q96MG8 357 aaPredicted RBP15.86■□□□□ 0.13
DDX56-210ENST00000479440 FCRL4Q96PJ5 515 aa15.86■□□□□ 0.13
DDX56-210ENST00000479440 POLR1EQ9GZS1 481 aaKnown RBP15.86■□□□□ 0.13
DDX56-210ENST00000479440 ING2Q9H160 280 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms