RNA–Protein interactions for RNA: ENST00000478507.1

TDP2-204, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 5

Gene TDP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-204ENST00000478507 CHKBQ9Y259 395 aa12.64□□□□□ -0.39
TDP2-204ENST00000478507 TP53TG5Q9Y2B4 290 aa12.64□□□□□ -0.39
TDP2-204ENST00000478507 GTF3C3Q9Y5Q9 886 aa12.64□□□□□ -0.39
TDP2-204ENST00000478507 GOLGA6L3A6NEY3 463 aa12.63□□□□□ -0.39
TDP2-204ENST00000478507 MFSD11O43934 449 aa12.63□□□□□ -0.39
TDP2-204ENST00000478507 NUAK1O60285 661 aa12.63□□□□□ -0.39
TDP2-204ENST00000478507 ASMTLO95671 621 aa12.63□□□□□ -0.39
TDP2-204ENST00000478507 FURINP09958 794 aa12.63□□□□□ -0.39
TDP2-204ENST00000478507 TCN2P20062 427 aa12.63□□□□□ -0.39
TDP2-204ENST00000478507 SPINT3P49223 89 aa12.63□□□□□ -0.39
TDP2-204ENST00000478507 ARSEP51690 589 aa12.63□□□□□ -0.39
TDP2-204ENST00000478507 CLCNKAP51800 687 aa12.63□□□□□ -0.39
TDP2-204ENST00000478507 GFERP55789 205 aa12.63□□□□□ -0.39
TDP2-204ENST00000478507 RPL26P61254 145 aaKnown RBP12.63□□□□□ -0.39
TDP2-204ENST00000478507 KLRB1Q12918 225 aa12.63□□□□□ -0.39
TDP2-204ENST00000478507 KDELC2Q7Z4H8 507 aa12.63□□□□□ -0.39
TDP2-204ENST00000478507 EID2BQ96D98 161 aa12.63□□□□□ -0.39
TDP2-204ENST00000478507 C9orf72Q96LT7 481 aa12.63□□□□□ -0.39
TDP2-204ENST00000478507 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.63□□□□□ -0.39
TDP2-204ENST00000478507 STN1Q9H668 368 aaKnown RBP12.63□□□□□ -0.39
TDP2-204ENST00000478507 RTN4Q9NQC3 1192 aaKnown RBP12.63□□□□□ -0.39
TDP2-204ENST00000478507 ANO10Q9NW15 660 aa12.63□□□□□ -0.39
TDP2-204ENST00000478507 KLHL3Q9UH77 587 aa12.63□□□□□ -0.39
TDP2-204ENST00000478507 AMACRQ9UHK6 382 aa12.63□□□□□ -0.39
TDP2-204ENST00000478507 RPL26L1Q9UNX3 145 aaKnown RBP12.63□□□□□ -0.39
TDP2-204ENST00000478507 KCTD3Q9Y597 815 aa12.63□□□□□ -0.39
TDP2-204ENST00000478507 OR5K4A6NMS3 321 aa12.62□□□□□ -0.39
TDP2-204ENST00000478507 TOX3O15405 576 aaPredicted RBP12.62□□□□□ -0.39
TDP2-204ENST00000478507 MTSS1O43312 755 aa12.62□□□□□ -0.39
TDP2-204ENST00000478507 CD48P09326 243 aa12.62□□□□□ -0.39
TDP2-204ENST00000478507 SLC2A4P14672 509 aa12.62□□□□□ -0.39
TDP2-204ENST00000478507 XRCC1P18887 633 aaPredicted RBP12.62□□□□□ -0.39
TDP2-204ENST00000478507 NR1D1P20393 614 aa12.62□□□□□ -0.39
TDP2-204ENST00000478507 CES1P23141 567 aa12.62□□□□□ -0.39
TDP2-204ENST00000478507 NIPAL4Q0D2K0 466 aa12.62□□□□□ -0.39
TDP2-204ENST00000478507 MMRN1Q13201 1228 aa12.62□□□□□ -0.39
TDP2-204ENST00000478507 SEPT6Q14141 434 aa12.62□□□□□ -0.39
TDP2-204ENST00000478507 PIGHQ14442 188 aaPredicted RBP12.62□□□□□ -0.39
TDP2-204ENST00000478507 PAFAH1B3Q15102 231 aaKnown RBP12.62□□□□□ -0.39
TDP2-204ENST00000478507 ASIC2Q16515 512 aa12.62□□□□□ -0.39
TDP2-204ENST00000478507 STX1AQ16623 288 aa12.62□□□□□ -0.39
TDP2-204ENST00000478507 NCBP2-AS2Q69YL0 99 aa12.62□□□□□ -0.39
TDP2-204ENST00000478507 TCTN3Q6NUS6 607 aa12.62□□□□□ -0.39
TDP2-204ENST00000478507 C16orf46Q6P387 395 aa12.62□□□□□ -0.39
TDP2-204ENST00000478507 PLXDC1Q8IUK5 500 aa12.62□□□□□ -0.39
TDP2-204ENST00000478507 AOPEPQ8N6M6 819 aa12.62□□□□□ -0.39
TDP2-204ENST00000478507 AVL9Q8NBF6 648 aa12.62□□□□□ -0.39
TDP2-204ENST00000478507 TRIM11Q96F44 468 aa12.62□□□□□ -0.39
TDP2-204ENST00000478507 TSGA13Q96PP4 275 aa12.62□□□□□ -0.39
TDP2-204ENST00000478507 PLEKHG4BQ96PX9 1271 aa12.62□□□□□ -0.39
TDP2-204ENST00000478507 ULBP3Q9BZM4 244 aa12.62□□□□□ -0.39
TDP2-204ENST00000478507 CARD9Q9H257 536 aa12.62□□□□□ -0.39
TDP2-204ENST00000478507 PRDM8Q9NQV8 689 aa12.62□□□□□ -0.39
TDP2-204ENST00000478507 SCHIP1Q9P0W5 487 aaPredicted RBP12.62□□□□□ -0.39
TDP2-204ENST00000478507 ATXN10Q9UBB4 475 aa12.62□□□□□ -0.39
TDP2-204ENST00000478507 MYO1AQ9UBC5 1043 aa12.62□□□□□ -0.39
TDP2-204ENST00000478507 CROTQ9UKG9 612 aa12.62□□□□□ -0.39
TDP2-204ENST00000478507 SLC30A1Q9Y6M5 507 aa12.62□□□□□ -0.39
TDP2-204ENST00000478507 C1orf232A0A0U1RR37 186 aa12.61□□□□□ -0.39
TDP2-204ENST00000478507 RGSL1A5PLK6 1076 aa12.61□□□□□ -0.39
TDP2-204ENST00000478507 CHUKO15111 745 aa12.61□□□□□ -0.39
TDP2-204ENST00000478507 MATN3O15232 486 aa12.61□□□□□ -0.39
TDP2-204ENST00000478507 GRID2O43424 1007 aa12.61□□□□□ -0.39
TDP2-204ENST00000478507 SNX2O60749 519 aa12.61□□□□□ -0.39
TDP2-204ENST00000478507 HLA-DQB2P05538 268 aa12.61□□□□□ -0.39
TDP2-204ENST00000478507 MMP2P08253 660 aa12.61□□□□□ -0.39
TDP2-204ENST00000478507 ZNF8P17098 575 aaPredicted RBP12.61□□□□□ -0.39
TDP2-204ENST00000478507 CDK11BP21127 795 aaKnown RBP12.61□□□□□ -0.39
TDP2-204ENST00000478507 DLSTP36957 453 aa12.61□□□□□ -0.39
TDP2-204ENST00000478507 MAPK9P45984 424 aa12.61□□□□□ -0.39
TDP2-204ENST00000478507 ZNF165P49910 485 aa12.61□□□□□ -0.39
TDP2-204ENST00000478507 EPHB1P54762 984 aa12.61□□□□□ -0.39
TDP2-204ENST00000478507 SH3BP2P78314 561 aa12.61□□□□□ -0.39
TDP2-204ENST00000478507 ITKQ08881 620 aa12.61□□□□□ -0.39
TDP2-204ENST00000478507 QPCTQ16769 361 aa12.61□□□□□ -0.39
TDP2-204ENST00000478507 TMEM26Q6ZUK4 368 aa12.61□□□□□ -0.39
TDP2-204ENST00000478507 PHYKPLQ8IUZ5 450 aa12.61□□□□□ -0.39
TDP2-204ENST00000478507 LPCAT1Q8NF37 534 aa12.61□□□□□ -0.39
TDP2-204ENST00000478507 BTBD6Q96KE9 485 aa12.61□□□□□ -0.39
TDP2-204ENST00000478507 FAM83DQ9H4H8 585 aa12.61□□□□□ -0.39
TDP2-204ENST00000478507 ZNF768Q9H5H4 540 aaKnown RBP12.61□□□□□ -0.39
TDP2-204ENST00000478507 PCDH9Q9HC56 1237 aa12.61□□□□□ -0.39
TDP2-204ENST00000478507 RBM22Q9NW64 420 aaKnown RBP eCLIP12.61□□□□□ -0.39
TDP2-204ENST00000478507 ZNF624Q9P2J8 865 aaPredicted RBP12.61□□□□□ -0.39
TDP2-204ENST00000478507 PCDHGA6Q9Y5G7 932 aa12.61□□□□□ -0.39
TDP2-204ENST00000478507 SHANK1Q9Y566 2161 aa12.61□□□□□ -0.39
TDP2-204ENST00000478507 MED13Q9UHV7 2174 aa12.6□□□□□ -0.39
TDP2-204ENST00000478507 ANKRD66B4E2M5 251 aa12.6□□□□□ -0.39
TDP2-204ENST00000478507 GPR89AB7ZAQ6 455 aa12.6□□□□□ -0.39
TDP2-204ENST00000478507 RECKO95980 971 aa12.6□□□□□ -0.39
TDP2-204ENST00000478507 PDGFAP04085 211 aa12.6□□□□□ -0.39
TDP2-204ENST00000478507 GPR89BP0CG08 455 aa12.6□□□□□ -0.39
TDP2-204ENST00000478507 CCNCP24863 283 aa12.6□□□□□ -0.39
TDP2-204ENST00000478507 SLC19A1P41440 591 aa12.6□□□□□ -0.39
TDP2-204ENST00000478507 LEPRP48357 1165 aaKnown RBP12.6□□□□□ -0.39
TDP2-204ENST00000478507 PPM1FP49593 454 aaPredicted RBP12.6□□□□□ -0.39
TDP2-204ENST00000478507 MLLT10P55197 1068 aa12.6□□□□□ -0.39
TDP2-204ENST00000478507 KLHL30Q0D2K2 578 aa12.6□□□□□ -0.39
TDP2-204ENST00000478507 DPYSL3Q14195 570 aa12.6□□□□□ -0.39
TDP2-204ENST00000478507 IL11RAQ14626 422 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms