RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 NR2C2P49116 596 aa14.3□□□□□ -0.12
SMARCE1-209ENST00000478349 TFDP2Q14188 446 aa14.3□□□□□ -0.12
SMARCE1-209ENST00000478349 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.3□□□□□ -0.12
SMARCE1-209ENST00000478349 NKAIN2Q5VXU1 208 aa14.3□□□□□ -0.12
SMARCE1-209ENST00000478349 ZDHHC20Q5W0Z9 365 aa14.3□□□□□ -0.12
SMARCE1-209ENST00000478349 SLC9A4Q6AI14 798 aa14.3□□□□□ -0.12
SMARCE1-209ENST00000478349 IYDQ6PHW0 289 aa14.3□□□□□ -0.12
SMARCE1-209ENST00000478349 RFLNAQ6ZTI6 216 aa14.3□□□□□ -0.12
SMARCE1-209ENST00000478349 VASH2Q86V25 355 aa14.3□□□□□ -0.12
SMARCE1-209ENST00000478349 RFX6Q8HWS3 928 aa14.3□□□□□ -0.12
SMARCE1-209ENST00000478349 PLXDC1Q8IUK5 500 aa14.3□□□□□ -0.12
SMARCE1-209ENST00000478349 CNGA4Q8IV77 575 aa14.3□□□□□ -0.12
SMARCE1-209ENST00000478349 TRIM48Q8IWZ4 208 aa14.3□□□□□ -0.12
SMARCE1-209ENST00000478349 RHOT1Q8IXI2 618 aa14.3□□□□□ -0.12
SMARCE1-209ENST00000478349 TRAM1L1Q8N609 369 aa14.3□□□□□ -0.12
SMARCE1-209ENST00000478349 PLD5Q8N7P1 536 aa14.3□□□□□ -0.12
SMARCE1-209ENST00000478349 SLC35G2Q8TBE7 412 aa14.3□□□□□ -0.12
SMARCE1-209ENST00000478349 RAPGEF5Q92565 580 aa14.3□□□□□ -0.12
SMARCE1-209ENST00000478349 AGAP2Q99490 1192 aa14.3□□□□□ -0.12
SMARCE1-209ENST00000478349 PACSIN1Q9BY11 444 aa14.3□□□□□ -0.12
SMARCE1-209ENST00000478349 GPR63Q9BZJ6 419 aa14.3□□□□□ -0.12
SMARCE1-209ENST00000478349 SLC25A51Q9H1U9 297 aa14.3□□□□□ -0.12
SMARCE1-209ENST00000478349 OSGEPL1Q9H4B0 414 aa14.3□□□□□ -0.12
SMARCE1-209ENST00000478349 MAGEE1Q9HCI5 957 aa14.3□□□□□ -0.12
SMARCE1-209ENST00000478349 ABHD10Q9NUJ1 306 aa14.3□□□□□ -0.12
SMARCE1-209ENST00000478349 A0A0U1RQS6 177 aa14.29□□□□□ -0.12
SMARCE1-209ENST00000478349 LILRA5A6NI73 299 aa14.29□□□□□ -0.12
SMARCE1-209ENST00000478349 EFCAB7A8K855 629 aa14.29□□□□□ -0.12
SMARCE1-209ENST00000478349 SPOPO43791 374 aa14.29□□□□□ -0.12
SMARCE1-209ENST00000478349 SLC28A2O43868 658 aa14.29□□□□□ -0.12
SMARCE1-209ENST00000478349 NUAK1O60285 661 aa14.29□□□□□ -0.12
SMARCE1-209ENST00000478349 SNX2O60749 519 aa14.29□□□□□ -0.12
SMARCE1-209ENST00000478349 FGF3P11487 239 aaPredicted RBP14.29□□□□□ -0.12
SMARCE1-209ENST00000478349 CLCNKAP51800 687 aa14.29□□□□□ -0.12
SMARCE1-209ENST00000478349 CDK18Q07002 472 aa14.29□□□□□ -0.12
SMARCE1-209ENST00000478349 ZBTB17Q13105 803 aa14.29□□□□□ -0.12
SMARCE1-209ENST00000478349 NFATC2Q13469 925 aa14.29□□□□□ -0.12
SMARCE1-209ENST00000478349 GALNT3Q14435 633 aa14.29□□□□□ -0.12
SMARCE1-209ENST00000478349 INSCQ1MX18 579 aa14.29□□□□□ -0.12
SMARCE1-209ENST00000478349 CYB5D1Q6P9G0 228 aa14.29□□□□□ -0.12
SMARCE1-209ENST00000478349 CEACAM20Q6UY09 585 aa14.29□□□□□ -0.12
SMARCE1-209ENST00000478349 ZNF574Q6ZN55 896 aaPredicted RBP14.29□□□□□ -0.12
SMARCE1-209ENST00000478349 IMP4Q96G21 291 aaKnown RBP14.29□□□□□ -0.12
SMARCE1-209ENST00000478349 AGAP3Q96P47 875 aa14.29□□□□□ -0.12
SMARCE1-209ENST00000478349 FERMT1Q9BQL6 677 aa14.29□□□□□ -0.12
SMARCE1-209ENST00000478349 ZCCHC2Q9C0B9 1178 aaKnown RBP14.29□□□□□ -0.12
SMARCE1-209ENST00000478349 TRIT1Q9H3H1 467 aaKnown RBP14.29□□□□□ -0.12
SMARCE1-209ENST00000478349 TRIM39Q9HCM9 518 aa14.29□□□□□ -0.12
SMARCE1-209ENST00000478349 PDP2Q9P2J9 529 aa14.29□□□□□ -0.12
SMARCE1-209ENST00000478349 TBC1D29Q9UFV1 150 aa14.29□□□□□ -0.12
SMARCE1-209ENST00000478349 INTUQ9ULD6 942 aa14.29□□□□□ -0.12
SMARCE1-209ENST00000478349 KCNK6Q9Y257 313 aa14.29□□□□□ -0.12
SMARCE1-209ENST00000478349 PLEKHM1Q9Y4G2 1056 aa14.29□□□□□ -0.12
SMARCE1-209ENST00000478349 ST14Q9Y5Y6 855 aa14.29□□□□□ -0.12
SMARCE1-209ENST00000478349 A0A0A6YYK5 440 aaPredicted RBP14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 FADS2P1A8MWK0 482 aa14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 KMOO15229 486 aa14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 VEGFDO43915 354 aa14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 MFAP3LO75121 409 aa14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 PPFIA2O75334 1257 aa14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 NDST3O95803 873 aa14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 SLC4A1P02730 911 aa14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 MMP2P08253 660 aa14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 MAPK9P45984 424 aa14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 SLC10A2Q12908 348 aaPredicted RBP14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 GTF2H3Q13889 308 aa14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 ASTE1Q2TB18 679 aaPredicted RBP14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 ALS2CLQ60I27 953 aa14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 PRICKLE2Q7Z3G6 844 aa14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 LRRTM4Q86VH4 590 aa14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 RBM12BQ8IXT5 1001 aaKnown RBP14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 CFAP46Q8IYW2 2715 aa14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 CACNA2D3Q8IZS8 1091 aa14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 SHROOM3Q8TF72 1996 aa14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 AHCTF1Q8WYP5 2266 aa14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 NCSTNQ92542 709 aa14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 EXTL1Q92935 676 aa14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 GLYATL1Q969I3 302 aa14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 CATSPER2Q96P56 530 aa14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 OLFM3Q96PB7 478 aa14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 PLEKHG4BQ96PX9 1271 aa14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 SMIM14Q96QK8 99 aa14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 SEMA4CQ9C0C4 833 aa14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 OR2AG1Q9H205 316 aa14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 ADNPQ9H2P0 1102 aa14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 TRABDQ9H4I3 376 aa14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 NHEJ1Q9H9Q4 299 aaPredicted RBP14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 UCK1Q9HA47 277 aa14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 LUC7LQ9NQ29 371 aaKnown RBP14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 CPNE7Q9UBL6 633 aa14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 ZNF711Q9Y462 761 aa14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 PRKAB1Q9Y478 270 aa14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 B3GALT1Q9Y5Z6 326 aa14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 OAS3Q9Y6K5 1087 aaKnown RBP14.28□□□□□ -0.12
SMARCE1-209ENST00000478349 TRBV23OR9-2A0A075B6M9 112 aa14.27□□□□□ -0.13
SMARCE1-209ENST00000478349 ZNF891A8MT65 544 aaPredicted RBP14.27□□□□□ -0.13
SMARCE1-209ENST00000478349 PDZK1P1A8MUH7 402 aa14.27□□□□□ -0.13
SMARCE1-209ENST00000478349 PSTPIP1O43586 416 aa14.27□□□□□ -0.13
SMARCE1-209ENST00000478349 RAD1O60671 282 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms