RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 VPS35Q96QK1 796 aa21.54■■□□□ 1.04
COL9A3-211ENST00000477612 FERMT1Q9BQL6 677 aa21.54■■□□□ 1.04
COL9A3-211ENST00000477612 GORASP1Q9BQQ3 440 aa21.54■■□□□ 1.04
COL9A3-211ENST00000477612 DESI2Q9BSY9 194 aa21.54■■□□□ 1.04
COL9A3-211ENST00000477612 C10orf88Q9H8K7 445 aa21.54■■□□□ 1.04
COL9A3-211ENST00000477612 ATXN10Q9UBB4 475 aa21.54■■□□□ 1.04
COL9A3-211ENST00000477612 RSPH14Q9UHP6 348 aa21.54■■□□□ 1.04
COL9A3-211ENST00000477612 ZNHIT2Q9UHR6 403 aa21.54■■□□□ 1.04
COL9A3-211ENST00000477612 CDRT15L2A8MXV6 281 aa21.53■■□□□ 1.04
COL9A3-211ENST00000477612 CHUKO15111 745 aa21.53■■□□□ 1.04
COL9A3-211ENST00000477612 DDX3YO15523 660 aaKnown RBP21.53■■□□□ 1.04
COL9A3-211ENST00000477612 RRP8O43159 456 aaKnown RBP21.53■■□□□ 1.04
COL9A3-211ENST00000477612 SLC25A14O95258 325 aaPredicted RBP21.53■■□□□ 1.04
COL9A3-211ENST00000477612 FASLGP48023 281 aa21.53■■□□□ 1.04
COL9A3-211ENST00000477612 CLCNKAP51800 687 aa21.53■■□□□ 1.04
COL9A3-211ENST00000477612 GEMP55040 296 aa21.53■■□□□ 1.04
COL9A3-211ENST00000477612 INHBCP55103 352 aa21.53■■□□□ 1.04
COL9A3-211ENST00000477612 EIF3EP60228 445 aaKnown RBP21.53■■□□□ 1.04
COL9A3-211ENST00000477612 SQSTM1Q13501 440 aa21.53■■□□□ 1.04
COL9A3-211ENST00000477612 ZDHHC20Q5W0Z9 365 aa21.53■■□□□ 1.04
COL9A3-211ENST00000477612 ITPRIPL1Q6GPH6 555 aa21.53■■□□□ 1.04
COL9A3-211ENST00000477612 UBL4BQ8N7F7 174 aa21.53■■□□□ 1.04
COL9A3-211ENST00000477612 Q8N9G6 341 aaPredicted RBP21.53■■□□□ 1.04
COL9A3-211ENST00000477612 DCBLD2Q96PD2 775 aa21.53■■□□□ 1.04
COL9A3-211ENST00000477612 SYNDIG1Q9H7V2 258 aa21.53■■□□□ 1.04
COL9A3-211ENST00000477612 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.53■■□□□ 1.04
COL9A3-211ENST00000477612 IL17CQ9P0M4 197 aa21.53■■□□□ 1.04
COL9A3-211ENST00000477612 BPTFQ12830 3046 aa21.53■■□□□ 1.04
COL9A3-211ENST00000477612 MACROD2A1Z1Q3 448 aa21.52■■□□□ 1.04
COL9A3-211ENST00000477612 PPM1DO15297 605 aa21.52■■□□□ 1.04
COL9A3-211ENST00000477612 ZW10O43264 779 aa21.52■■□□□ 1.04
COL9A3-211ENST00000477612 GRID2O43424 1007 aa21.52■■□□□ 1.04
COL9A3-211ENST00000477612 ANXA9O76027 345 aa21.52■■□□□ 1.04
COL9A3-211ENST00000477612 ZNF8P17098 575 aaPredicted RBP21.52■■□□□ 1.04
COL9A3-211ENST00000477612 CHRNA4P43681 627 aa21.52■■□□□ 1.04
COL9A3-211ENST00000477612 TNNT3P45378 269 aaPredicted RBP21.52■■□□□ 1.04
COL9A3-211ENST00000477612 GSDMDP57764 484 aa21.52■■□□□ 1.04
COL9A3-211ENST00000477612 KLF1Q13351 362 aaPredicted RBP21.52■■□□□ 1.04
COL9A3-211ENST00000477612 ANKRD20A2Q5SQ80 823 aa21.52■■□□□ 1.04
COL9A3-211ENST00000477612 ANKRD20A1Q5TYW2 823 aa21.52■■□□□ 1.04
COL9A3-211ENST00000477612 ANKRD20A3Q5VUR7 823 aa21.52■■□□□ 1.04
COL9A3-211ENST00000477612 ALS2CLQ60I27 953 aa21.52■■□□□ 1.04
COL9A3-211ENST00000477612 RANBP10Q6VN20 620 aa21.52■■□□□ 1.04
COL9A3-211ENST00000477612 LRRC69Q6ZNQ3 347 aa21.52■■□□□ 1.04
COL9A3-211ENST00000477612 CHST15Q7LFX5 561 aaPredicted RBP21.52■■□□□ 1.04
COL9A3-211ENST00000477612 ADGRG6Q86SQ4 1221 aa21.52■■□□□ 1.04
COL9A3-211ENST00000477612 SLITRK4Q8IW52 837 aa21.52■■□□□ 1.04
COL9A3-211ENST00000477612 KLHDC8BQ8IXV7 354 aa21.52■■□□□ 1.04
COL9A3-211ENST00000477612 SFRP1Q8N474 314 aa21.52■■□□□ 1.04
COL9A3-211ENST00000477612 ZNF248Q8NDW4 579 aa21.52■■□□□ 1.04
COL9A3-211ENST00000477612 IPMKQ8NFU5 416 aa21.52■■□□□ 1.04
COL9A3-211ENST00000477612 HES6Q96HZ4 224 aa21.52■■□□□ 1.04
COL9A3-211ENST00000477612 THSD1Q9NS62 852 aa21.52■■□□□ 1.04
COL9A3-211ENST00000477612 TMPRSS11EQ9UL52 423 aa21.52■■□□□ 1.04
COL9A3-211ENST00000477612 ATXN7L1Q9ULK2 861 aaPredicted RBP21.52■■□□□ 1.04
COL9A3-211ENST00000477612 ZFYVE26Q68DK2 2539 aa21.52■■□□□ 1.03
COL9A3-211ENST00000477612 PTPRQQ9UMZ3 2332 aa21.51■■□□□ 1.03
COL9A3-211ENST00000477612 RHPN2P1A8MT19 583 aa21.51■■□□□ 1.03
COL9A3-211ENST00000477612 GOLGA6L6A8MZA4 724 aa21.51■■□□□ 1.03
COL9A3-211ENST00000477612 CPNE6O95741 557 aa21.51■■□□□ 1.03
COL9A3-211ENST00000477612 RBMS1P29558 406 aaKnown RBP21.51■■□□□ 1.03
COL9A3-211ENST00000477612 ADRA1AP35348 466 aa21.51■■□□□ 1.03
COL9A3-211ENST00000477612 ABCG1P45844 678 aa21.51■■□□□ 1.03
COL9A3-211ENST00000477612 PCBP4P57723 403 aaKnown RBP21.51■■□□□ 1.03
COL9A3-211ENST00000477612 TMPRSS9Q7Z410 1059 aa21.51■■□□□ 1.03
COL9A3-211ENST00000477612 CLEC14AQ86T13 490 aa21.51■■□□□ 1.03
COL9A3-211ENST00000477612 PHYKPLQ8IUZ5 450 aa21.51■■□□□ 1.03
COL9A3-211ENST00000477612 SLC25A41Q8N5S1 370 aa21.51■■□□□ 1.03
COL9A3-211ENST00000477612 TTC13Q8NBP0 860 aa21.51■■□□□ 1.03
COL9A3-211ENST00000477612 TMEM159Q96B96 161 aa21.51■■□□□ 1.03
COL9A3-211ENST00000477612 STRADBQ9C0K7 418 aa21.51■■□□□ 1.03
COL9A3-211ENST00000477612 AAR2Q9Y312 384 aaKnown RBP21.51■■□□□ 1.03
COL9A3-211ENST00000477612 PRKAB1Q9Y478 270 aa21.51■■□□□ 1.03
COL9A3-211ENST00000477612 CAPN6Q9Y6Q1 641 aa21.51■■□□□ 1.03
COL9A3-211ENST00000477612 A6NCN8 305 aa21.5■■□□□ 1.03
COL9A3-211ENST00000477612 KCNN4O15554 427 aa21.5■■□□□ 1.03
COL9A3-211ENST00000477612 VEGFDO43915 354 aa21.5■■□□□ 1.03
COL9A3-211ENST00000477612 PPFIA2O75334 1257 aa21.5■■□□□ 1.03
COL9A3-211ENST00000477612 EML2O95834 649 aa21.5■■□□□ 1.03
COL9A3-211ENST00000477612 ITPKBP27987 946 aa21.5■■□□□ 1.03
COL9A3-211ENST00000477612 OR1D5P58170 312 aa21.5■■□□□ 1.03
COL9A3-211ENST00000477612 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.5■■□□□ 1.03
COL9A3-211ENST00000477612 IYDQ6PHW0 289 aa21.5■■□□□ 1.03
COL9A3-211ENST00000477612 DARS2Q6PI48 645 aaKnown RBP21.5■■□□□ 1.03
COL9A3-211ENST00000477612 RAB11FIP2Q7L804 512 aa21.5■■□□□ 1.03
COL9A3-211ENST00000477612 SPATA13Q96N96 652 aa21.5■■□□□ 1.03
COL9A3-211ENST00000477612 FSD1LQ9BXM9 530 aa21.5■■□□□ 1.03
COL9A3-211ENST00000477612 FOXP3Q9BZS1 431 aa21.5■■□□□ 1.03
COL9A3-211ENST00000477612 OR2AG1Q9H205 316 aa21.5■■□□□ 1.03
COL9A3-211ENST00000477612 BPIFA1Q9NP55 256 aa21.5■■□□□ 1.03
COL9A3-211ENST00000477612 IL26Q9NPH9 171 aa21.5■■□□□ 1.03
COL9A3-211ENST00000477612 TBC1D29Q9UFV1 150 aa21.5■■□□□ 1.03
COL9A3-211ENST00000477612 PACSIN2Q9UNF0 486 aaPredicted RBP21.5■■□□□ 1.03
COL9A3-211ENST00000477612 SSUH2Q9Y2M2 353 aa21.5■■□□□ 1.03
COL9A3-211ENST00000477612 GOLGA6L9A6NEM1 432 aa21.49■■□□□ 1.03
COL9A3-211ENST00000477612 C5orf60A6NFR6 353 aa21.49■■□□□ 1.03
COL9A3-211ENST00000477612 F5H423 210 aaPredicted RBP21.49■■□□□ 1.03
COL9A3-211ENST00000477612 PLD2O14939 933 aa21.49■■□□□ 1.03
COL9A3-211ENST00000477612 FTCDO95954 541 aa21.49■■□□□ 1.03
COL9A3-211ENST00000477612 AGTP01019 485 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms