RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 PLTPP55058 493 aa11.53□□□□□ -0.56
LSM2-212ENST00000477182 CDK18Q07002 472 aa11.53□□□□□ -0.56
LSM2-212ENST00000477182 GALNT3Q14435 633 aa11.53□□□□□ -0.56
LSM2-212ENST00000477182 MORF4L2Q15014 288 aa11.53□□□□□ -0.56
LSM2-212ENST00000477182 CFAP58Q5T655 872 aa11.53□□□□□ -0.56
LSM2-212ENST00000477182 ARMC12Q5T9G4 340 aa11.53□□□□□ -0.56
LSM2-212ENST00000477182 FOXR1Q6PIV2 292 aa11.53□□□□□ -0.56
LSM2-212ENST00000477182 ZDHHC24Q6UX98 284 aa11.53□□□□□ -0.56
LSM2-212ENST00000477182 PPP1R21Q6ZMI0 780 aa11.53□□□□□ -0.56
LSM2-212ENST00000477182 HOOK3Q86VS8 718 aa11.53□□□□□ -0.56
LSM2-212ENST00000477182 ZSWIM9Q86XI8 627 aa11.53□□□□□ -0.56
LSM2-212ENST00000477182 IFT20Q8IY31 132 aa11.53□□□□□ -0.56
LSM2-212ENST00000477182 BBOF1Q8ND07 529 aa11.53□□□□□ -0.56
LSM2-212ENST00000477182 TMIEQ8NEW7 156 aa11.53□□□□□ -0.56
LSM2-212ENST00000477182 LPCAT1Q8NF37 534 aa11.53□□□□□ -0.56
LSM2-212ENST00000477182 ARRDC3Q96B67 414 aa11.53□□□□□ -0.56
LSM2-212ENST00000477182 LIN37Q96GY3 246 aaPredicted RBP11.53□□□□□ -0.56
LSM2-212ENST00000477182 ZNF641Q96N77 438 aaPredicted RBP11.53□□□□□ -0.56
LSM2-212ENST00000477182 TRIB3Q96RU7 358 aa11.53□□□□□ -0.56
LSM2-212ENST00000477182 ADNPQ9H2P0 1102 aa11.53□□□□□ -0.56
LSM2-212ENST00000477182 ANKZF1Q9H8Y5 726 aa11.53□□□□□ -0.56
LSM2-212ENST00000477182 FAM114A2Q9NRY5 505 aa11.53□□□□□ -0.56
LSM2-212ENST00000477182 PIH1D1Q9NWS0 290 aaKnown RBP11.53□□□□□ -0.56
LSM2-212ENST00000477182 UCKL1Q9NWZ5 548 aa11.53□□□□□ -0.56
LSM2-212ENST00000477182 SHOC2Q9UQ13 582 aa11.53□□□□□ -0.56
LSM2-212ENST00000477182 KIF26BQ2KJY2 2108 aa11.53□□□□□ -0.56
LSM2-212ENST00000477182 SCN8AQ9UQD0 1980 aa11.52□□□□□ -0.56
LSM2-212ENST00000477182 NBASA2RRP1 2371 aa11.52□□□□□ -0.57
LSM2-212ENST00000477182 CCDC187A0A096LP49 1063 aa11.52□□□□□ -0.57
LSM2-212ENST00000477182 LOC285095A0A1B0GVY8 99 aa11.52□□□□□ -0.57
LSM2-212ENST00000477182 C1QTNF3-AMACRE9PGA6 284 aa11.52□□□□□ -0.57
LSM2-212ENST00000477182 PRAMEF26H0Y7S4 382 aa11.52□□□□□ -0.57
LSM2-212ENST00000477182 NDC80O14777 642 aa11.52□□□□□ -0.57
LSM2-212ENST00000477182 FZD6O60353 706 aa11.52□□□□□ -0.57
LSM2-212ENST00000477182 RNGTTO60942 597 aaKnown RBP11.52□□□□□ -0.57
LSM2-212ENST00000477182 NDST3O95803 873 aa11.52□□□□□ -0.57
LSM2-212ENST00000477182 CPP00450 1065 aa11.52□□□□□ -0.57
LSM2-212ENST00000477182 CARSP49589 748 aaKnown RBP11.52□□□□□ -0.57
LSM2-212ENST00000477182 EPHB1P54762 984 aa11.52□□□□□ -0.57
LSM2-212ENST00000477182 PPP2CBP62714 309 aa11.52□□□□□ -0.57
LSM2-212ENST00000477182 PPP2CAP67775 309 aa11.52□□□□□ -0.57
LSM2-212ENST00000477182 CDK16Q00536 496 aa11.52□□□□□ -0.57
LSM2-212ENST00000477182 MTM1Q13496 603 aa11.52□□□□□ -0.57
LSM2-212ENST00000477182 HLTFQ14527 1009 aaKnown RBP eCLIP11.52□□□□□ -0.57
LSM2-212ENST00000477182 TBR1Q16650 682 aa11.52□□□□□ -0.57
LSM2-212ENST00000477182 SETMARQ53H47 684 aaPredicted RBP11.52□□□□□ -0.57
LSM2-212ENST00000477182 ZNF805Q5CZA5 627 aa11.52□□□□□ -0.57
LSM2-212ENST00000477182 LRRC73Q5JTD7 316 aa11.52□□□□□ -0.57
LSM2-212ENST00000477182 SIRPB2Q5JXA9 342 aa11.52□□□□□ -0.57
LSM2-212ENST00000477182 FAM46CQ5VWP2 391 aa11.52□□□□□ -0.57
LSM2-212ENST00000477182 RANBP10Q6VN20 620 aa11.52□□□□□ -0.57
LSM2-212ENST00000477182 ZNF534Q76KX8 674 aa11.52□□□□□ -0.57
LSM2-212ENST00000477182 AADATQ8N5Z0 425 aa11.52□□□□□ -0.57
LSM2-212ENST00000477182 MCUQ8NE86 351 aa11.52□□□□□ -0.57
LSM2-212ENST00000477182 OR52K1Q8NGK4 314 aa11.52□□□□□ -0.57
LSM2-212ENST00000477182 WDR48Q8TAF3 677 aa11.52□□□□□ -0.57
LSM2-212ENST00000477182 FBXO25Q8TCJ0 367 aa11.52□□□□□ -0.57
LSM2-212ENST00000477182 ART4Q93070 314 aa11.52□□□□□ -0.57
LSM2-212ENST00000477182 ECHDC3Q96DC8 303 aa11.52□□□□□ -0.57
LSM2-212ENST00000477182 PWWP2AQ96N64 755 aa11.52□□□□□ -0.57
LSM2-212ENST00000477182 SMIM14Q96QK8 99 aa11.52□□□□□ -0.57
LSM2-212ENST00000477182 EPN3Q9H201 632 aa11.52□□□□□ -0.57
LSM2-212ENST00000477182 PCDHGA7Q9Y5G6 932 aa11.52□□□□□ -0.57
LSM2-212ENST00000477182 DOCK9Q9BZ29 2069 aa11.51□□□□□ -0.57
LSM2-212ENST00000477182 ICE1Q9Y2F5 2266 aa11.51□□□□□ -0.57
LSM2-212ENST00000477182 TSPAN11A1L157 253 aa11.51□□□□□ -0.57
LSM2-212ENST00000477182 C16orf96A6NNT2 1141 aa11.51□□□□□ -0.57
LSM2-212ENST00000477182 SCAMP1O15126 338 aa11.51□□□□□ -0.57
LSM2-212ENST00000477182 PIAS2O75928 621 aa11.51□□□□□ -0.57
LSM2-212ENST00000477182 EPOP01588 193 aa11.51□□□□□ -0.57
LSM2-212ENST00000477182 PRKCGP05129 697 aa11.51□□□□□ -0.57
LSM2-212ENST00000477182 PIRTP0C851 137 aa11.51□□□□□ -0.57
LSM2-212ENST00000477182 GIMD1P0DJR0 217 aa11.51□□□□□ -0.57
LSM2-212ENST00000477182 TIMP2P16035 220 aa11.51□□□□□ -0.57
LSM2-212ENST00000477182 TPH1P17752 444 aa11.51□□□□□ -0.57
LSM2-212ENST00000477182 CTPS1P17812 591 aa11.51□□□□□ -0.57
LSM2-212ENST00000477182 HLA-DPA1P20036 260 aa11.51□□□□□ -0.57
LSM2-212ENST00000477182 ITGB7P26010 798 aa11.51□□□□□ -0.57
LSM2-212ENST00000477182 RIPPLY3P57055 190 aa11.51□□□□□ -0.57
LSM2-212ENST00000477182 SARNPP82979 210 aaKnown RBP11.51□□□□□ -0.57
LSM2-212ENST00000477182 CAV1Q03135 178 aa11.51□□□□□ -0.57
LSM2-212ENST00000477182 CUL1Q13616 776 aa11.51□□□□□ -0.57
LSM2-212ENST00000477182 PTPRRQ15256 657 aa11.51□□□□□ -0.57
LSM2-212ENST00000477182 SLC1A5Q15758 541 aa11.51□□□□□ -0.57
LSM2-212ENST00000477182 QPCTQ16769 361 aa11.51□□□□□ -0.57
LSM2-212ENST00000477182 DENND5AQ6IQ26 1287 aa11.51□□□□□ -0.57
LSM2-212ENST00000477182 LRRC8BQ6P9F7 803 aa11.51□□□□□ -0.57
LSM2-212ENST00000477182 BRAT1Q6PJG6 821 aa11.51□□□□□ -0.57
LSM2-212ENST00000477182 PARS2Q7L3T8 475 aaKnown RBP11.51□□□□□ -0.57
LSM2-212ENST00000477182 LINC00523Q86TU6 105 aa11.51□□□□□ -0.57
LSM2-212ENST00000477182 CAND1Q86VP6 1230 aaKnown RBP11.51□□□□□ -0.57
LSM2-212ENST00000477182 DNAAF3Q8N9W5 541 aa11.51□□□□□ -0.57
LSM2-212ENST00000477182 PIH1D2Q8WWB5 315 aa11.51□□□□□ -0.57
LSM2-212ENST00000477182 PPP1R16AQ96I34 528 aa11.51□□□□□ -0.57
LSM2-212ENST00000477182 ADGRE3Q9BY15 652 aa11.51□□□□□ -0.57
LSM2-212ENST00000477182 CASS4Q9NQ75 786 aa11.51□□□□□ -0.57
LSM2-212ENST00000477182 DYRK4Q9NR20 520 aa11.51□□□□□ -0.57
LSM2-212ENST00000477182 ZDHHC18Q9NUE0 388 aa11.51□□□□□ -0.57
LSM2-212ENST00000477182 DKK3Q9UBP4 350 aa11.51□□□□□ -0.57
LSM2-212ENST00000477182 ANAPC2Q9UJX6 822 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms