RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 NLRP8Q86W28 1048 aa13.84□□□□□ -0.19
CCDC78-209ENST00000474647 ATCAYQ86WG3 371 aa13.84□□□□□ -0.19
CCDC78-209ENST00000474647 PLXDC1Q8IUK5 500 aa13.84□□□□□ -0.19
CCDC78-209ENST00000474647 FAM26EQ8N5C1 309 aa13.84□□□□□ -0.19
CCDC78-209ENST00000474647 AOPEPQ8N6M6 819 aa13.84□□□□□ -0.19
CCDC78-209ENST00000474647 STAMBPL1Q96FJ0 436 aa13.84□□□□□ -0.19
CCDC78-209ENST00000474647 ELMO2Q96JJ3 720 aa13.84□□□□□ -0.19
CCDC78-209ENST00000474647 BTBD6Q96KE9 485 aa13.84□□□□□ -0.19
CCDC78-209ENST00000474647 PRDM8Q9NQV8 689 aa13.84□□□□□ -0.19
CCDC78-209ENST00000474647 PKD2L2Q9NZM6 624 aa13.84□□□□□ -0.19
CCDC78-209ENST00000474647 CPNE7Q9UBL6 633 aa13.84□□□□□ -0.19
CCDC78-209ENST00000474647 CROTQ9UKG9 612 aa13.84□□□□□ -0.19
CCDC78-209ENST00000474647 KCTD3Q9Y597 815 aa13.84□□□□□ -0.19
CCDC78-209ENST00000474647 MN1Q10571 1320 aaPredicted RBP13.84□□□□□ -0.19
CCDC78-209ENST00000474647 KIR2DS5A0A0G2JLQ3 304 aa13.83□□□□□ -0.2
CCDC78-209ENST00000474647 A0A0G2JNG1 304 aa13.83□□□□□ -0.2
CCDC78-209ENST00000474647 BLACEA4D250 179 aa13.83□□□□□ -0.2
CCDC78-209ENST00000474647 KIR2DS3K7RE56 304 aa13.83□□□□□ -0.2
CCDC78-209ENST00000474647 DDX3XO00571 662 aaKnown RBP eCLIP13.83□□□□□ -0.2
CCDC78-209ENST00000474647 GRID2O43424 1007 aa13.83□□□□□ -0.2
CCDC78-209ENST00000474647 KATNA1O75449 491 aa13.83□□□□□ -0.2
CCDC78-209ENST00000474647 MYBL1P10243 752 aa13.83□□□□□ -0.2
CCDC78-209ENST00000474647 TYRP1P17643 537 aa13.83□□□□□ -0.2
CCDC78-209ENST00000474647 F8A1P23610 371 aa13.83□□□□□ -0.2
CCDC78-209ENST00000474647 GJC1P36383 396 aa13.83□□□□□ -0.2
CCDC78-209ENST00000474647 GARSP41250 739 aaKnown RBP13.83□□□□□ -0.2
CCDC78-209ENST00000474647 SSR1P43307 286 aaKnown RBP13.83□□□□□ -0.2
CCDC78-209ENST00000474647 SEPHS1P49903 392 aa13.83□□□□□ -0.2
CCDC78-209ENST00000474647 ZNF165P49910 485 aa13.83□□□□□ -0.2
CCDC78-209ENST00000474647 MLLT10P55197 1068 aa13.83□□□□□ -0.2
CCDC78-209ENST00000474647 KLHL30Q0D2K2 578 aa13.83□□□□□ -0.2
CCDC78-209ENST00000474647 KIR2DS5Q14953 304 aa13.83□□□□□ -0.2
CCDC78-209ENST00000474647 ANO6Q4KMQ2 910 aa13.83□□□□□ -0.2
CCDC78-209ENST00000474647 RASGRP3Q8IV61 690 aa13.83□□□□□ -0.2
CCDC78-209ENST00000474647 TRIM48Q8IWZ4 208 aa13.83□□□□□ -0.2
CCDC78-209ENST00000474647 TEX26Q8N6G2 289 aa13.83□□□□□ -0.2
CCDC78-209ENST00000474647 TEX19Q8NA77 164 aa13.83□□□□□ -0.2
CCDC78-209ENST00000474647 GALNT6Q8NCL4 622 aa13.83□□□□□ -0.2
CCDC78-209ENST00000474647 TEKT4Q8WW24 435 aa13.83□□□□□ -0.2
CCDC78-209ENST00000474647 TGM7Q96PF1 710 aa13.83□□□□□ -0.2
CCDC78-209ENST00000474647 HSD3B7Q9H2F3 369 aa13.83□□□□□ -0.2
CCDC78-209ENST00000474647 EPB41L1Q9H4G0 881 aa13.83□□□□□ -0.2
CCDC78-209ENST00000474647 RMI1Q9H9A7 625 aa13.83□□□□□ -0.2
CCDC78-209ENST00000474647 PCDH9Q9HC56 1237 aa13.83□□□□□ -0.2
CCDC78-209ENST00000474647 HAUS2Q9NVX0 235 aa13.83□□□□□ -0.2
CCDC78-209ENST00000474647 SIDT1Q9NXL6 827 aaKnown RBP13.83□□□□□ -0.2
CCDC78-209ENST00000474647 KCNMB2Q9Y691 235 aa13.83□□□□□ -0.2
CCDC78-209ENST00000474647 SHANK1Q9Y566 2161 aa13.83□□□□□ -0.2
CCDC78-209ENST00000474647 RP1L1Q8IWN7 2480 aaPredicted RBP13.82□□□□□ -0.2
CCDC78-209ENST00000474647 CLEC18AA5D8T8 446 aa13.82□□□□□ -0.2
CCDC78-209ENST00000474647 A6NCN8 305 aa13.82□□□□□ -0.2
CCDC78-209ENST00000474647 LILRA5A6NI73 299 aa13.82□□□□□ -0.2
CCDC78-209ENST00000474647 LRRC10BA6NIK2 292 aa13.82□□□□□ -0.2
CCDC78-209ENST00000474647 MKRN2OSH3BPM6 223 aa13.82□□□□□ -0.2
CCDC78-209ENST00000474647 K7EM74 188 aa13.82□□□□□ -0.2
CCDC78-209ENST00000474647 RASSF9O75901 435 aa13.82□□□□□ -0.2
CCDC78-209ENST00000474647 MTA2O94776 668 aa13.82□□□□□ -0.2
CCDC78-209ENST00000474647 SLC4A1P02730 911 aa13.82□□□□□ -0.2
CCDC78-209ENST00000474647 CD48P09326 243 aa13.82□□□□□ -0.2
CCDC78-209ENST00000474647 SKILP12757 684 aa13.82□□□□□ -0.2
CCDC78-209ENST00000474647 SPINT3P49223 89 aa13.82□□□□□ -0.2
CCDC78-209ENST00000474647 SH3BP2P78314 561 aa13.82□□□□□ -0.2
CCDC78-209ENST00000474647 SLC25A11Q02978 314 aaKnown RBP13.82□□□□□ -0.2
CCDC78-209ENST00000474647 MAP7Q14244 749 aa13.82□□□□□ -0.2
CCDC78-209ENST00000474647 PIGHQ14442 188 aaPredicted RBP13.82□□□□□ -0.2
CCDC78-209ENST00000474647 IHHQ14623 411 aa13.82□□□□□ -0.2
CCDC78-209ENST00000474647 SEPT7Q16181 437 aaKnown RBP13.82□□□□□ -0.2
CCDC78-209ENST00000474647 INSCQ1MX18 579 aa13.82□□□□□ -0.2
CCDC78-209ENST00000474647 TDRD12Q587J7 1177 aaKnown RBP13.82□□□□□ -0.2
CCDC78-209ENST00000474647 CCDC122Q5T0U0 273 aa13.82□□□□□ -0.2
CCDC78-209ENST00000474647 ZNF648Q5T619 568 aaPredicted RBP13.82□□□□□ -0.2
CCDC78-209ENST00000474647 HENMT1Q5T8I9 393 aaKnown RBP13.82□□□□□ -0.2
CCDC78-209ENST00000474647 ALS2CLQ60I27 953 aa13.82□□□□□ -0.2
CCDC78-209ENST00000474647 TIGD7Q6NT04 549 aaPredicted RBP13.82□□□□□ -0.2
CCDC78-209ENST00000474647 CRTC3Q6UUV7 619 aa13.82□□□□□ -0.2
CCDC78-209ENST00000474647 C6orf15Q6UXA7 325 aaPredicted RBP13.82□□□□□ -0.2
CCDC78-209ENST00000474647 CLEC18BQ6UXF7 455 aa13.82□□□□□ -0.2
CCDC78-209ENST00000474647 AVL9Q8NBF6 648 aa13.82□□□□□ -0.2
CCDC78-209ENST00000474647 CLEC18CQ8NCF0 446 aa13.82□□□□□ -0.2
CCDC78-209ENST00000474647 CCHCR1Q8TD31 782 aa13.82□□□□□ -0.2
CCDC78-209ENST00000474647 LRRN4Q8WUT4 740 aa13.82□□□□□ -0.2
CCDC78-209ENST00000474647 MIB2Q96AX9 1013 aa13.82□□□□□ -0.2
CCDC78-209ENST00000474647 C9orf72Q96LT7 481 aa13.82□□□□□ -0.2
CCDC78-209ENST00000474647 OR6C1Q96RD1 312 aa13.82□□□□□ -0.2
CCDC78-209ENST00000474647 WDR24Q96S15 920 aa13.82□□□□□ -0.2
CCDC78-209ENST00000474647 BPIFA3Q9BQP9 254 aa13.82□□□□□ -0.2
CCDC78-209ENST00000474647 OR2AG1Q9H205 316 aa13.82□□□□□ -0.2
CCDC78-209ENST00000474647 FAM83DQ9H4H8 585 aa13.82□□□□□ -0.2
CCDC78-209ENST00000474647 LRRC4CQ9HCJ2 640 aa13.82□□□□□ -0.2
CCDC78-209ENST00000474647 KLC4Q9NSK0 619 aa13.82□□□□□ -0.2
CCDC78-209ENST00000474647 RBM22Q9NW64 420 aaKnown RBP eCLIP13.82□□□□□ -0.2
CCDC78-209ENST00000474647 ATXN10Q9UBB4 475 aa13.82□□□□□ -0.2
CCDC78-209ENST00000474647 LNPEPQ9UIQ6 1025 aa13.82□□□□□ -0.2
CCDC78-209ENST00000474647 ANAPC7Q9UJX3 599 aa13.82□□□□□ -0.2
CCDC78-209ENST00000474647 CNOT6Q9ULM6 557 aaKnown RBP13.82□□□□□ -0.2
CCDC78-209ENST00000474647 CCDC88CQ9P219 2028 aa13.81□□□□□ -0.2
CCDC78-209ENST00000474647 ESPL1Q14674 2120 aa13.81□□□□□ -0.2
CCDC78-209ENST00000474647 CDC14CA4D256 554 aa13.81□□□□□ -0.2
CCDC78-209ENST00000474647 OR5K4A6NMS3 321 aa13.81□□□□□ -0.2
CCDC78-209ENST00000474647 NUAK1O60285 661 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms