RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 THRAP10827 490 aa20.15■□□□□ 0.82
PDLIM4-206ENST00000474421 CSTF2P33240 577 aaKnown RBP eCLIP20.15■□□□□ 0.82
PDLIM4-206ENST00000474421 NOP2P46087 812 aaKnown RBP20.15■□□□□ 0.82
PDLIM4-206ENST00000474421 PPM1FP49593 454 aaPredicted RBP20.15■□□□□ 0.82
PDLIM4-206ENST00000474421 HADHBP55084 474 aaKnown RBP20.15■□□□□ 0.82
PDLIM4-206ENST00000474421 HHEXQ03014 270 aa20.15■□□□□ 0.82
PDLIM4-206ENST00000474421 TBX2Q13207 712 aaPredicted RBP20.15■□□□□ 0.82
PDLIM4-206ENST00000474421 TGIF1Q15583 401 aa20.15■□□□□ 0.82
PDLIM4-206ENST00000474421 PCSK7Q16549 785 aa20.15■□□□□ 0.82
PDLIM4-206ENST00000474421 MANEAQ5SRI9 462 aa20.15■□□□□ 0.82
PDLIM4-206ENST00000474421 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.15■□□□□ 0.82
PDLIM4-206ENST00000474421 NKAIN2Q5VXU1 208 aa20.15■□□□□ 0.82
PDLIM4-206ENST00000474421 TMEM71Q6P5X7 295 aa20.15■□□□□ 0.82
PDLIM4-206ENST00000474421 IYDQ6PHW0 289 aa20.15■□□□□ 0.82
PDLIM4-206ENST00000474421 MFSD7Q6UXD7 560 aa20.15■□□□□ 0.82
PDLIM4-206ENST00000474421 KDELC2Q7Z4H8 507 aa20.15■□□□□ 0.82
PDLIM4-206ENST00000474421 TMC3Q7Z5M5 1100 aa20.15■□□□□ 0.82
PDLIM4-206ENST00000474421 SLC9B2Q86UD5 537 aa20.15■□□□□ 0.82
PDLIM4-206ENST00000474421 PHYKPLQ8IUZ5 450 aa20.15■□□□□ 0.82
PDLIM4-206ENST00000474421 RCBTB1Q8NDN9 531 aa20.15■□□□□ 0.82
PDLIM4-206ENST00000474421 GPR63Q9BZJ6 419 aa20.15■□□□□ 0.82
PDLIM4-206ENST00000474421 TRIM39Q9HCM9 518 aa20.15■□□□□ 0.82
PDLIM4-206ENST00000474421 FOXJ2Q9P0K8 574 aa20.15■□□□□ 0.82
PDLIM4-206ENST00000474421 SHOC2Q9UQ13 582 aa20.15■□□□□ 0.82
PDLIM4-206ENST00000474421 ZNF711Q9Y462 761 aa20.15■□□□□ 0.82
PDLIM4-206ENST00000474421 PRKAB1Q9Y478 270 aa20.15■□□□□ 0.82
PDLIM4-206ENST00000474421 PCDHGA3Q9Y5H0 932 aa20.15■□□□□ 0.82
PDLIM4-206ENST00000474421 TRBV23OR9-2A0A075B6M9 112 aa20.14■□□□□ 0.81
PDLIM4-206ENST00000474421 KIR2DS5A0A0G2JLQ3 304 aa20.14■□□□□ 0.81
PDLIM4-206ENST00000474421 A0A0G2JNG1 304 aa20.14■□□□□ 0.81
PDLIM4-206ENST00000474421 KIR2DS3K7RE56 304 aa20.14■□□□□ 0.81
PDLIM4-206ENST00000474421 SLC25A14O95258 325 aaPredicted RBP20.14■□□□□ 0.81
PDLIM4-206ENST00000474421 NDST3O95803 873 aa20.14■□□□□ 0.81
PDLIM4-206ENST00000474421 ACP5P13686 325 aa20.14■□□□□ 0.81
PDLIM4-206ENST00000474421 CSF2RBP32927 897 aa20.14■□□□□ 0.81
PDLIM4-206ENST00000474421 CDKN2BP42772 138 aa20.14■□□□□ 0.81
PDLIM4-206ENST00000474421 MAGEA1P43355 309 aa20.14■□□□□ 0.81
PDLIM4-206ENST00000474421 TNNT3P45378 269 aaPredicted RBP20.14■□□□□ 0.81
PDLIM4-206ENST00000474421 KIR2DS5Q14953 304 aa20.14■□□□□ 0.81
PDLIM4-206ENST00000474421 PRKD1Q15139 912 aaPredicted RBP20.14■□□□□ 0.81
PDLIM4-206ENST00000474421 TAZQ16635 292 aa20.14■□□□□ 0.81
PDLIM4-206ENST00000474421 KIAA1614Q5VZ46 1190 aa20.14■□□□□ 0.81
PDLIM4-206ENST00000474421 ZNF605Q86T29 641 aa20.14■□□□□ 0.81
PDLIM4-206ENST00000474421 ZFAND4Q86XD8 727 aa20.14■□□□□ 0.81
PDLIM4-206ENST00000474421 TRAM1L1Q8N609 369 aa20.14■□□□□ 0.81
PDLIM4-206ENST00000474421 ZSCAN1Q8NBB4 408 aa20.14■□□□□ 0.81
PDLIM4-206ENST00000474421 TFB1MQ8WVM0 346 aaKnown RBP20.14■□□□□ 0.81
PDLIM4-206ENST00000474421 EID2BQ96D98 161 aa20.14■□□□□ 0.81
PDLIM4-206ENST00000474421 SGF29Q96ES7 293 aa20.14■□□□□ 0.81
PDLIM4-206ENST00000474421 TEKT5Q96M29 485 aa20.14■□□□□ 0.81
PDLIM4-206ENST00000474421 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.14■□□□□ 0.81
PDLIM4-206ENST00000474421 ATXN10Q9UBB4 475 aa20.14■□□□□ 0.81
PDLIM4-206ENST00000474421 TBC1D29Q9UFV1 150 aa20.14■□□□□ 0.81
PDLIM4-206ENST00000474421 KCNK6Q9Y257 313 aa20.14■□□□□ 0.81
PDLIM4-206ENST00000474421 HYOU1Q9Y4L1 999 aa20.14■□□□□ 0.81
PDLIM4-206ENST00000474421 PCYT1BQ9Y5K3 369 aaPredicted RBP20.14■□□□□ 0.81
PDLIM4-206ENST00000474421 CFAP46Q8IYW2 2715 aa20.13■□□□□ 0.81
PDLIM4-206ENST00000474421 HELZ2Q9BYK8 2649 aaKnown RBP20.13■□□□□ 0.81
PDLIM4-206ENST00000474421 STMND1H3BQB6 276 aa20.13■□□□□ 0.81
PDLIM4-206ENST00000474421 EFSO43281 561 aa20.13■□□□□ 0.81
PDLIM4-206ENST00000474421 CST8O60676 142 aa20.13■□□□□ 0.81
PDLIM4-206ENST00000474421 CCL4P13236 92 aa20.13■□□□□ 0.81
PDLIM4-206ENST00000474421 F3P13726 295 aa20.13■□□□□ 0.81
PDLIM4-206ENST00000474421 PTPN3P26045 913 aa20.13■□□□□ 0.81
PDLIM4-206ENST00000474421 CLCNKAP51800 687 aa20.13■□□□□ 0.81
PDLIM4-206ENST00000474421 ALS2CLQ60I27 953 aa20.13■□□□□ 0.81
PDLIM4-206ENST00000474421 WDR74Q6RFH5 385 aaPredicted RBP20.13■□□□□ 0.81
PDLIM4-206ENST00000474421 DTX1Q86Y01 620 aa20.13■□□□□ 0.81
PDLIM4-206ENST00000474421 DDA1Q9BW61 102 aa20.13■□□□□ 0.81
PDLIM4-206ENST00000474421 ASPSCR1Q9BZE9 553 aa20.13■□□□□ 0.81
PDLIM4-206ENST00000474421 OR2AG1Q9H205 316 aa20.13■□□□□ 0.81
PDLIM4-206ENST00000474421 EPB41L1Q9H4G0 881 aa20.13■□□□□ 0.81
PDLIM4-206ENST00000474421 LUC7LQ9NQ29 371 aaKnown RBP20.13■□□□□ 0.81
PDLIM4-206ENST00000474421 PDP2Q9P2J9 529 aa20.13■□□□□ 0.81
PDLIM4-206ENST00000474421 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.13■□□□□ 0.81
PDLIM4-206ENST00000474421 ALG6Q9Y672 507 aa20.13■□□□□ 0.81
PDLIM4-206ENST00000474421 A6NCN8 305 aa20.12■□□□□ 0.81
PDLIM4-206ENST00000474421 B4E171 279 aa20.12■□□□□ 0.81
PDLIM4-206ENST00000474421 SNX2O60749 519 aa20.12■□□□□ 0.81
PDLIM4-206ENST00000474421 PMPCBO75439 489 aa20.12■□□□□ 0.81
PDLIM4-206ENST00000474421 EML2O95834 649 aa20.12■□□□□ 0.81
PDLIM4-206ENST00000474421 MT-CYBP00156 380 aaPredicted RBP20.12■□□□□ 0.81
PDLIM4-206ENST00000474421 SLC4A1P02730 911 aa20.12■□□□□ 0.81
PDLIM4-206ENST00000474421 PIRTP0C851 137 aa20.12■□□□□ 0.81
PDLIM4-206ENST00000474421 FGF3P11487 239 aaPredicted RBP20.12■□□□□ 0.81
PDLIM4-206ENST00000474421 ZNF8P17098 575 aaPredicted RBP20.12■□□□□ 0.81
PDLIM4-206ENST00000474421 TSPAN7P41732 249 aa20.12■□□□□ 0.81
PDLIM4-206ENST00000474421 EPHA4P54764 986 aa20.12■□□□□ 0.81
PDLIM4-206ENST00000474421 TFDP3Q5H9I0 405 aa20.12■□□□□ 0.81
PDLIM4-206ENST00000474421 SARM1Q6SZW1 724 aa20.12■□□□□ 0.81
PDLIM4-206ENST00000474421 XKR5Q6UX68 686 aa20.12■□□□□ 0.81
PDLIM4-206ENST00000474421 SPOCD1Q6ZMY3 1216 aa20.12■□□□□ 0.81
PDLIM4-206ENST00000474421 GPR26Q8NDV2 337 aa20.12■□□□□ 0.81
PDLIM4-206ENST00000474421 SPATA22Q8NHS9 363 aa20.12■□□□□ 0.81
PDLIM4-206ENST00000474421 P3H4Q92791 437 aa20.12■□□□□ 0.81
PDLIM4-206ENST00000474421 GLYATL1Q969I3 302 aa20.12■□□□□ 0.81
PDLIM4-206ENST00000474421 MED8Q96G25 268 aa20.12■□□□□ 0.81
PDLIM4-206ENST00000474421 VAT1Q99536 393 aa20.12■□□□□ 0.81
PDLIM4-206ENST00000474421 TRABDQ9H4I3 376 aa20.12■□□□□ 0.81
PDLIM4-206ENST00000474421 FAM153AQ9UHL3 310 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms