RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 DPYSL5Q9BPU6 564 aa9.5□□□□□ -0.89
MCF2L-223ENST00000473345 ULBP3Q9BZM4 244 aa9.5□□□□□ -0.89
MCF2L-223ENST00000473345 ZMYND15Q9H091 742 aa9.5□□□□□ -0.89
MCF2L-223ENST00000473345 PCDH18Q9HCL0 1135 aa9.5□□□□□ -0.89
MCF2L-223ENST00000473345 LUZP4Q9P127 313 aa9.5□□□□□ -0.89
MCF2L-223ENST00000473345 ATXN10Q9UBB4 475 aa9.5□□□□□ -0.89
MCF2L-223ENST00000473345 CPNE7Q9UBL6 633 aa9.5□□□□□ -0.89
MCF2L-223ENST00000473345 TMPRSS11EQ9UL52 423 aa9.5□□□□□ -0.89
MCF2L-223ENST00000473345 SHANK1Q9Y566 2161 aa9.5□□□□□ -0.89
MCF2L-223ENST00000473345 SPTAN1Q13813 2472 aaKnown RBP9.49□□□□□ -0.89
MCF2L-223ENST00000473345 SYCE3A1L190 88 aa9.49□□□□□ -0.89
MCF2L-223ENST00000473345 GOLGA6L3A6NEY3 463 aa9.49□□□□□ -0.89
MCF2L-223ENST00000473345 MTX2O75431 263 aa9.49□□□□□ -0.89
MCF2L-223ENST00000473345 KATNA1O75449 491 aa9.49□□□□□ -0.89
MCF2L-223ENST00000473345 SPAG6O75602 509 aa9.49□□□□□ -0.89
MCF2L-223ENST00000473345 MMP2P08253 660 aa9.49□□□□□ -0.89
MCF2L-223ENST00000473345 F3P13726 295 aa9.49□□□□□ -0.89
MCF2L-223ENST00000473345 FOLR1P15328 257 aa9.49□□□□□ -0.89
MCF2L-223ENST00000473345 EPHA4P54764 986 aa9.49□□□□□ -0.89
MCF2L-223ENST00000473345 SLC25A11Q02978 314 aaKnown RBP9.49□□□□□ -0.89
MCF2L-223ENST00000473345 FOXM1Q08050 763 aa9.49□□□□□ -0.89
MCF2L-223ENST00000473345 LRP8Q14114 963 aa9.49□□□□□ -0.89
MCF2L-223ENST00000473345 KCNAB1Q14722 419 aa9.49□□□□□ -0.89
MCF2L-223ENST00000473345 PLA2G4EQ3MJ16 856 aa9.49□□□□□ -0.89
MCF2L-223ENST00000473345 ATP13A4Q4VNC1 1196 aa9.49□□□□□ -0.89
MCF2L-223ENST00000473345 ALG1LQ6GMV1 187 aa9.49□□□□□ -0.89
MCF2L-223ENST00000473345 LCN10Q6JVE6 187 aa9.49□□□□□ -0.89
MCF2L-223ENST00000473345 C6orf15Q6UXA7 325 aaPredicted RBP9.49□□□□□ -0.89
MCF2L-223ENST00000473345 USP45Q70EL2 814 aa9.49□□□□□ -0.89
MCF2L-223ENST00000473345 ZNF571Q7Z3V5 609 aaPredicted RBP9.49□□□□□ -0.89
MCF2L-223ENST00000473345 NLRP8Q86W28 1048 aa9.49□□□□□ -0.89
MCF2L-223ENST00000473345 GAS2L3Q86XJ1 694 aa9.49□□□□□ -0.89
MCF2L-223ENST00000473345 ZNF547Q8IVP9 402 aa9.49□□□□□ -0.89
MCF2L-223ENST00000473345 TMEM151BQ8IW70 566 aa9.49□□□□□ -0.89
MCF2L-223ENST00000473345 ESX1Q8N693 406 aa9.49□□□□□ -0.89
MCF2L-223ENST00000473345 TEX19Q8NA77 164 aa9.49□□□□□ -0.89
MCF2L-223ENST00000473345 EXD1Q8NHP7 514 aa9.49□□□□□ -0.89
MCF2L-223ENST00000473345 TGM7Q96PF1 710 aa9.49□□□□□ -0.89
MCF2L-223ENST00000473345 OR6C1Q96RD1 312 aa9.49□□□□□ -0.89
MCF2L-223ENST00000473345 TDRD1Q9BXT4 1180 aaKnown RBP9.49□□□□□ -0.89
MCF2L-223ENST00000473345 LIMA1Q9UHB6 759 aaKnown RBP9.49□□□□□ -0.89
MCF2L-223ENST00000473345 DACH1Q9UI36 760 aa9.49□□□□□ -0.89
MCF2L-223ENST00000473345 MAP4K5Q9Y4K4 846 aa9.49□□□□□ -0.89
MCF2L-223ENST00000473345 KCTD3Q9Y597 815 aa9.49□□□□□ -0.89
MCF2L-223ENST00000473345 LILRA5A6NI73 299 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 TCP11X1B4DZS4 312 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 PRPSAP2O60256 369 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 NUAK1O60285 661 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 CREG1O75629 220 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 RFPL1O75677 317 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 NDUFA10O95299 355 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 HLA-DQB2P05538 268 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 ATP1A3P13637 1013 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 HSPA9P38646 679 aaKnown RBP9.48□□□□□ -0.89
MCF2L-223ENST00000473345 SPINT3P49223 89 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 PPM1FP49593 454 aaPredicted RBP9.48□□□□□ -0.89
MCF2L-223ENST00000473345 ARSEP51690 589 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 SLC10A2Q12908 348 aaPredicted RBP9.48□□□□□ -0.89
MCF2L-223ENST00000473345 SEMA5AQ13591 1074 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 DNASE1L3Q13609 305 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 GSE1Q14687 1217 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 QPCTQ16769 361 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 EIF2S3LQ2VIR3 472 aaKnown RBP9.48□□□□□ -0.89
MCF2L-223ENST00000473345 MARC1Q5VT66 337 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 PRAMEF17Q5VTA0 474 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 CRTC3Q6UUV7 619 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 FAM92BQ6ZTR7 304 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 TMEM26Q6ZUK4 368 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 LYSMD3Q7Z3D4 306 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 ADGRG6Q86SQ4 1221 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 SLC38A9Q8NBW4 561 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 GPR26Q8NDV2 337 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 NEK11Q8NG66 645 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 CPT1CQ8TCG5 803 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 MAML1Q92585 1016 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 HSPH1Q92598 858 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 PPM1MQ96MI6 270 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 ERGIC2Q96RQ1 377 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 ZPBPQ9BS86 351 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 ACTL8Q9H568 366 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 ZNF768Q9H5H4 540 aaKnown RBP9.48□□□□□ -0.89
MCF2L-223ENST00000473345 ZWILCHQ9H900 591 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 MLXIPLQ9NP71 852 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.48□□□□□ -0.897e-7■■■■□ 21.4
MCF2L-223ENST00000473345 PARVAQ9NVD7 372 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 VPS18Q9P253 973 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 CNOT8Q9UFF9 292 aaKnown RBP9.48□□□□□ -0.89
MCF2L-223ENST00000473345 KCND3Q9UK17 655 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 POLHQ9Y253 713 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 WDR37Q9Y2I8 494 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 PCDHGA6Q9Y5G7 932 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 NOTCH2Q04721 2471 aa9.48□□□□□ -0.89
MCF2L-223ENST00000473345 IGHV5-51A0A0C4DH38 117 aa9.47□□□□□ -0.89
MCF2L-223ENST00000473345 A0A1W2PQ67 120 aa9.47□□□□□ -0.89
MCF2L-223ENST00000473345 ANKRD62A6NC57 917 aa9.47□□□□□ -0.89
MCF2L-223ENST00000473345 OR52A4PA6NMU1 304 aa9.47□□□□□ -0.89
MCF2L-223ENST00000473345 EIF3CLB5ME19 914 aaKnown RBP9.47□□□□□ -0.89
MCF2L-223ENST00000473345 MKRN2OSH3BPM6 223 aa9.47□□□□□ -0.89
MCF2L-223ENST00000473345 H3BRJ5 948 aa9.47□□□□□ -0.89
MCF2L-223ENST00000473345 GRID2O43424 1007 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms