RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 CARD9Q9H257 536 aa22.33■■□□□ 1.17
PTP4A1-203ENST00000473334 ASCL3Q9NQ33 180 aa22.33■■□□□ 1.17
PTP4A1-203ENST00000473334 HACD3Q9P035 362 aa22.33■■□□□ 1.17
PTP4A1-203ENST00000473334 PACSIN2Q9UNF0 486 aaPredicted RBP22.33■■□□□ 1.17
PTP4A1-203ENST00000473334 PRKAB1Q9Y478 270 aa22.33■■□□□ 1.17
PTP4A1-203ENST00000473334 UNC13CQ8NB66 2214 aa22.33■■□□□ 1.16
PTP4A1-203ENST00000473334 NUAK1O60285 661 aa22.32■■□□□ 1.16
PTP4A1-203ENST00000473334 ANXA9O76027 345 aa22.32■■□□□ 1.16
PTP4A1-203ENST00000473334 STK10O94804 968 aaKnown RBP22.32■■□□□ 1.16
PTP4A1-203ENST00000473334 SLC25A14O95258 325 aaPredicted RBP22.32■■□□□ 1.16
PTP4A1-203ENST00000473334 FTCDO95954 541 aa22.32■■□□□ 1.16
PTP4A1-203ENST00000473334 HMGCLP35914 325 aa22.32■■□□□ 1.16
PTP4A1-203ENST00000473334 ABCG1P45844 678 aa22.32■■□□□ 1.16
PTP4A1-203ENST00000473334 B4GALNT1Q00973 533 aa22.32■■□□□ 1.16
PTP4A1-203ENST00000473334 NR1D2Q14995 579 aa22.32■■□□□ 1.16
PTP4A1-203ENST00000473334 DARS2Q6PI48 645 aaKnown RBP22.32■■□□□ 1.16
PTP4A1-203ENST00000473334 PHYKPLQ8IUZ5 450 aa22.32■■□□□ 1.16
PTP4A1-203ENST00000473334 TTC30BQ8N4P2 665 aa22.32■■□□□ 1.16
PTP4A1-203ENST00000473334 GLYATL1Q969I3 302 aa22.32■■□□□ 1.16
PTP4A1-203ENST00000473334 FOXP3Q9BZS1 431 aa22.32■■□□□ 1.16
PTP4A1-203ENST00000473334 STRADBQ9C0K7 418 aa22.32■■□□□ 1.16
PTP4A1-203ENST00000473334 EPB41L5Q9HCM4 733 aa22.32■■□□□ 1.16
PTP4A1-203ENST00000473334 THSD1Q9NS62 852 aa22.32■■□□□ 1.16
PTP4A1-203ENST00000473334 ATXN10Q9UBB4 475 aa22.32■■□□□ 1.16
PTP4A1-203ENST00000473334 ATXN7L1Q9ULK2 861 aaPredicted RBP22.32■■□□□ 1.16
PTP4A1-203ENST00000473334 NBEAQ8NFP9 2946 aa22.32■■□□□ 1.16
PTP4A1-203ENST00000473334 FAM208BQ5VWN6 2430 aa22.31■■□□□ 1.16
PTP4A1-203ENST00000473334 GOLGA6L9A6NEM1 432 aa22.31■■□□□ 1.16
PTP4A1-203ENST00000473334 GPR89AB7ZAQ6 455 aa22.31■■□□□ 1.16
PTP4A1-203ENST00000473334 DDX3YO15523 660 aaKnown RBP22.31■■□□□ 1.16
PTP4A1-203ENST00000473334 KCNN4O15554 427 aa22.31■■□□□ 1.16
PTP4A1-203ENST00000473334 ZW10O43264 779 aa22.31■■□□□ 1.16
PTP4A1-203ENST00000473334 ZNF189O75820 626 aaPredicted RBP22.31■■□□□ 1.16
PTP4A1-203ENST00000473334 GPR89BP0CG08 455 aa22.31■■□□□ 1.16
PTP4A1-203ENST00000473334 RBMS1P29558 406 aaKnown RBP22.31■■□□□ 1.16
PTP4A1-203ENST00000473334 CCKBRP32239 447 aa22.31■■□□□ 1.16
PTP4A1-203ENST00000473334 PCBP4P57723 403 aaKnown RBP22.31■■□□□ 1.16
PTP4A1-203ENST00000473334 ANKRD20A2Q5SQ80 823 aa22.31■■□□□ 1.16
PTP4A1-203ENST00000473334 ANKRD20A1Q5TYW2 823 aa22.31■■□□□ 1.16
PTP4A1-203ENST00000473334 ANKRD20A3Q5VUR7 823 aa22.31■■□□□ 1.16
PTP4A1-203ENST00000473334 BLOC1S5Q8TDH9 187 aa22.31■■□□□ 1.16
PTP4A1-203ENST00000473334 PRR11Q96HE9 360 aaPredicted RBP22.31■■□□□ 1.16
PTP4A1-203ENST00000473334 GORASP1Q9BQQ3 440 aa22.31■■□□□ 1.16
PTP4A1-203ENST00000473334 OR2AG1Q9H205 316 aa22.31■■□□□ 1.16
PTP4A1-203ENST00000473334 TRIM39Q9HCM9 518 aa22.31■■□□□ 1.16
PTP4A1-203ENST00000473334 BPIFA1Q9NP55 256 aa22.31■■□□□ 1.16
PTP4A1-203ENST00000473334 ARFGAP3Q9NP61 516 aa22.31■■□□□ 1.16
PTP4A1-203ENST00000473334 CAPN6Q9Y6Q1 641 aa22.31■■□□□ 1.16
PTP4A1-203ENST00000473334 GRID2O43424 1007 aa22.3■■□□□ 1.16
PTP4A1-203ENST00000473334 PTMAP06454 111 aaKnown RBP22.3■■□□□ 1.16
PTP4A1-203ENST00000473334 ACP5P13686 325 aa22.3■■□□□ 1.16
PTP4A1-203ENST00000473334 ZNF8P17098 575 aaPredicted RBP22.3■■□□□ 1.16
PTP4A1-203ENST00000473334 MLLT3P42568 568 aaPredicted RBP22.3■■□□□ 1.16
PTP4A1-203ENST00000473334 GPR3P46089 330 aa22.3■■□□□ 1.16
PTP4A1-203ENST00000473334 EIF3IQ13347 325 aaKnown RBP22.3■■□□□ 1.16
PTP4A1-203ENST00000473334 MAP9Q49MG5 647 aa22.3■■□□□ 1.16
PTP4A1-203ENST00000473334 ZDHHC20Q5W0Z9 365 aa22.3■■□□□ 1.16
PTP4A1-203ENST00000473334 FOXR1Q6PIV2 292 aa22.3■■□□□ 1.16
PTP4A1-203ENST00000473334 GLT6D1Q7Z4J2 308 aa22.3■■□□□ 1.16
PTP4A1-203ENST00000473334 ADGRG6Q86SQ4 1221 aa22.3■■□□□ 1.16
PTP4A1-203ENST00000473334 RNF10Q8N5U6 811 aaKnown RBP22.3■■□□□ 1.16
PTP4A1-203ENST00000473334 TTC13Q8NBP0 860 aa22.3■■□□□ 1.16
PTP4A1-203ENST00000473334 ZNF248Q8NDW4 579 aa22.3■■□□□ 1.16
PTP4A1-203ENST00000473334 SLC46A1Q96NT5 459 aa22.3■■□□□ 1.16
PTP4A1-203ENST00000473334 VPS35Q96QK1 796 aa22.3■■□□□ 1.16
PTP4A1-203ENST00000473334 FICDQ9BVA6 458 aa22.3■■□□□ 1.16
PTP4A1-203ENST00000473334 TSGA10Q9BZW7 698 aa22.3■■□□□ 1.16
PTP4A1-203ENST00000473334 RALYQ9UKM9 306 aaKnown RBP22.3■■□□□ 1.16
PTP4A1-203ENST00000473334 KCNK6Q9Y257 313 aa22.3■■□□□ 1.16
PTP4A1-203ENST00000473334 PMS2P1A4D2B8 440 aa22.29■■□□□ 1.16
PTP4A1-203ENST00000473334 B4GAT1O43505 415 aa22.29■■□□□ 1.16
PTP4A1-203ENST00000473334 PSMB4P28070 264 aa22.29■■□□□ 1.16
PTP4A1-203ENST00000473334 ALDH4A1P30038 563 aa22.29■■□□□ 1.16
PTP4A1-203ENST00000473334 OR1D5P58170 312 aa22.29■■□□□ 1.16
PTP4A1-203ENST00000473334 ZFP36L1Q07352 338 aaKnown RBP22.29■■□□□ 1.16
PTP4A1-203ENST00000473334 PRPSAP1Q14558 356 aa22.29■■□□□ 1.16
PTP4A1-203ENST00000473334 ZNF648Q5T619 568 aaPredicted RBP22.29■■□□□ 1.16
PTP4A1-203ENST00000473334 RAB11FIP2Q7L804 512 aa22.29■■□□□ 1.16
PTP4A1-203ENST00000473334 HES6Q96HZ4 224 aa22.29■■□□□ 1.16
PTP4A1-203ENST00000473334 SPATA13Q96N96 652 aa22.29■■□□□ 1.16
PTP4A1-203ENST00000473334 IL17CQ9P0M4 197 aa22.29■■□□□ 1.16
PTP4A1-203ENST00000473334 AAR2Q9Y312 384 aaKnown RBP22.29■■□□□ 1.16
PTP4A1-203ENST00000473334 ADGRG1Q9Y653 693 aa22.29■■□□□ 1.16
PTP4A1-203ENST00000473334 PPM1DO15297 605 aa22.28■■□□□ 1.16
PTP4A1-203ENST00000473334 VEGFDO43915 354 aa22.28■■□□□ 1.16
PTP4A1-203ENST00000473334 CPNE6O95741 557 aa22.28■■□□□ 1.16
PTP4A1-203ENST00000473334 AGTP01019 485 aa22.28■■□□□ 1.16
PTP4A1-203ENST00000473334 ITPKBP27987 946 aa22.28■■□□□ 1.16
PTP4A1-203ENST00000473334 SPAM1P38567 509 aa22.28■■□□□ 1.16
PTP4A1-203ENST00000473334 FASLGP48023 281 aa22.28■■□□□ 1.16
PTP4A1-203ENST00000473334 CCDC173Q0VFZ6 552 aa22.28■■□□□ 1.16
PTP4A1-203ENST00000473334 CLPPQ16740 277 aaPredicted RBP22.28■■□□□ 1.16
PTP4A1-203ENST00000473334 AMZ1Q400G9 498 aa22.28■■□□□ 1.16
PTP4A1-203ENST00000473334 ATP13A5Q4VNC0 1218 aa22.28■■□□□ 1.16
PTP4A1-203ENST00000473334 PIM3Q86V86 326 aa22.28■■□□□ 1.16
PTP4A1-203ENST00000473334 SFRP1Q8N474 314 aa22.28■■□□□ 1.16
PTP4A1-203ENST00000473334 FBXO39Q8N4B4 442 aa22.28■■□□□ 1.16
PTP4A1-203ENST00000473334 CCDC110Q8TBZ0 833 aa22.28■■□□□ 1.16
PTP4A1-203ENST00000473334 DTX3LQ8TDB6 740 aa22.28■■□□□ 1.16
PTP4A1-203ENST00000473334 SLC37A2Q8TED4 501 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms