RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 KRTCAP3Q53RY4 240 aa5.3□□□□□ -1.56
SSB-209ENST00000470621 LCN10Q6JVE6 187 aa5.3□□□□□ -1.56
SSB-209ENST00000470621 KLHL35Q6PF15 583 aa5.3□□□□□ -1.56
SSB-209ENST00000470621 PAPD4Q6PIY7 484 aaKnown RBP5.3□□□□□ -1.56
SSB-209ENST00000470621 ASB18Q6ZVZ8 466 aa5.3□□□□□ -1.56
SSB-209ENST00000470621 GPR180Q86V85 440 aa5.3□□□□□ -1.56
SSB-209ENST00000470621 MUC20Q8N307 709 aaPredicted RBP5.3□□□□□ -1.56
SSB-209ENST00000470621 HM13Q8TCT9 377 aa5.3□□□□□ -1.56
SSB-209ENST00000470621 USP6NLQ92738 828 aa5.3□□□□□ -1.56
SSB-209ENST00000470621 CDCA5Q96FF9 252 aa5.3□□□□□ -1.56
SSB-209ENST00000470621 QRFPRQ96P65 431 aa5.3□□□□□ -1.56
SSB-209ENST00000470621 SEPT5Q99719 369 aaPredicted RBP5.3□□□□□ -1.56
SSB-209ENST00000470621 SDF2L1Q9HCN8 221 aa5.3□□□□□ -1.56
SSB-209ENST00000470621 ARHGEF40Q8TER5 1519 aa5.29□□□□□ -1.56
SSB-209ENST00000470621 A0A1W2PP11 408 aa5.29□□□□□ -1.56
SSB-209ENST00000470621 BMPR1BO00238 502 aa5.29□□□□□ -1.56
SSB-209ENST00000470621 WDHD1O75717 1129 aaPredicted RBP5.29□□□□□ -1.56
SSB-209ENST00000470621 OR2C1O95371 312 aa5.29□□□□□ -1.56
SSB-209ENST00000470621 ACADMP11310 421 aa5.29□□□□□ -1.56
SSB-209ENST00000470621 CDH2P19022 906 aaPredicted RBP5.29□□□□□ -1.56
SSB-209ENST00000470621 ANXA7P20073 488 aaKnown RBP5.29□□□□□ -1.56
SSB-209ENST00000470621 KCNA5P22460 613 aa5.29□□□□□ -1.56
SSB-209ENST00000470621 PRCPP42785 496 aa5.29□□□□□ -1.56
SSB-209ENST00000470621 RXRGP48443 463 aa5.29□□□□□ -1.56
SSB-209ENST00000470621 GEMIN4P57678 1058 aaKnown RBP5.29□□□□□ -1.56
SSB-209ENST00000470621 MRPS34P82930 218 aaKnown RBP5.29□□□□□ -1.56
SSB-209ENST00000470621 TROAPQ12815 778 aa5.29□□□□□ -1.56
SSB-209ENST00000470621 SIM2Q14190 667 aaPredicted RBP5.29□□□□□ -1.56
SSB-209ENST00000470621 EIF4A2Q14240 407 aaKnown RBP5.29□□□□□ -1.56
SSB-209ENST00000470621 ZNF234Q14588 700 aa5.29□□□□□ -1.56
SSB-209ENST00000470621 ADIPOQQ15848 244 aa5.29□□□□□ -1.56
SSB-209ENST00000470621 IRAK1BP1Q5VVH5 260 aa5.29□□□□□ -1.56
SSB-209ENST00000470621 KIAA0930Q6ICG6 404 aaPredicted RBP5.29□□□□□ -1.56
SSB-209ENST00000470621 EXOC3L1Q86VI1 746 aa5.29□□□□□ -1.56
SSB-209ENST00000470621 KCNH5Q8NCM2 988 aa5.29□□□□□ -1.56
SSB-209ENST00000470621 OR8K5Q8NH50 307 aa5.29□□□□□ -1.56
SSB-209ENST00000470621 SPATA3Q8NHX4 192 aa5.29□□□□□ -1.56
SSB-209ENST00000470621 CMTM3Q96MX0 182 aa5.29□□□□□ -1.56
SSB-209ENST00000470621 NODALQ96S42 347 aa5.29□□□□□ -1.56
SSB-209ENST00000470621 CHCHD6Q9BRQ6 235 aa5.29□□□□□ -1.56
SSB-209ENST00000470621 SYT17Q9BSW7 474 aa5.29□□□□□ -1.56
SSB-209ENST00000470621 SEPT11Q9NVA2 429 aaKnown RBP5.29□□□□□ -1.56
SSB-209ENST00000470621 DLGAP4Q9Y2H0 992 aa5.29□□□□□ -1.56
SSB-209ENST00000470621 ASPDHA6ND91 283 aa5.28□□□□□ -1.56
SSB-209ENST00000470621 EIF4E1BA6NMX2 242 aaKnown RBP5.28□□□□□ -1.56
SSB-209ENST00000470621 HS3ST1O14792 307 aa5.28□□□□□ -1.56
SSB-209ENST00000470621 KCNN4O15554 427 aa5.28□□□□□ -1.56
SSB-209ENST00000470621 PLPP2O43688 288 aa5.28□□□□□ -1.56
SSB-209ENST00000470621 PTP4A3O75365 173 aa5.28□□□□□ -1.56
SSB-209ENST00000470621 KRT36O76013 467 aa5.28□□□□□ -1.56
SSB-209ENST00000470621 IGLV2-11P01706 119 aa5.28□□□□□ -1.56
SSB-209ENST00000470621 UMODP07911 640 aa5.28□□□□□ -1.56
SSB-209ENST00000470621 UGT1A1P22309 533 aa5.28□□□□□ -1.56
SSB-209ENST00000470621 MARK3P27448 753 aa5.28□□□□□ -1.56
SSB-209ENST00000470621 ACADLP28330 430 aa5.28□□□□□ -1.56
SSB-209ENST00000470621 HADHAP40939 763 aa5.28□□□□□ -1.56
SSB-209ENST00000470621 ZBED6P86452 979 aa5.28□□□□□ -1.56
SSB-209ENST00000470621 POU3F1Q03052 451 aaPredicted RBP5.28□□□□□ -1.56
SSB-209ENST00000470621 GTF2H2Q13888 395 aa5.28□□□□□ -1.56
SSB-209ENST00000470621 TRNP1Q6NT89 227 aa5.28□□□□□ -1.56
SSB-209ENST00000470621 GTF2H2CQ6P1K8 395 aa5.28□□□□□ -1.56
SSB-209ENST00000470621 CFAP77Q6ZQR2 320 aa5.28□□□□□ -1.56
SSB-209ENST00000470621 TSPAN33Q86UF1 283 aa5.28□□□□□ -1.56
SSB-209ENST00000470621 RNF168Q8IYW5 571 aaPredicted RBP5.28□□□□□ -1.56
SSB-209ENST00000470621 RASGEF1CQ8N431 466 aa5.28□□□□□ -1.56
SSB-209ENST00000470621 MAB21L3Q8N8X9 362 aa5.28□□□□□ -1.56
SSB-209ENST00000470621 IL17RCQ8NAC3 791 aa5.28□□□□□ -1.56
SSB-209ENST00000470621 SGCDQ92629 289 aa5.28□□□□□ -1.56
SSB-209ENST00000470621 FEM1CQ96JP0 617 aa5.28□□□□□ -1.56
SSB-209ENST00000470621 GAD1Q99259 594 aa5.28□□□□□ -1.56
SSB-209ENST00000470621 FTOQ9C0B1 505 aaKnown RBP eCLIP5.28□□□□□ -1.56
SSB-209ENST00000470621 TCF7L2Q9NQB0 619 aa5.28□□□□□ -1.56
SSB-209ENST00000470621 HCFC1R1Q9NWW0 138 aa5.28□□□□□ -1.56
SSB-209ENST00000470621 KLHL9Q9P2J3 617 aa5.28□□□□□ -1.56
SSB-209ENST00000470621 FBXW11Q9UKB1 542 aa5.28□□□□□ -1.56
SSB-209ENST00000470621 C16orf97H3BN30 126 aa5.27□□□□□ -1.57
SSB-209ENST00000470621 TMEM178BH3BS89 294 aa5.27□□□□□ -1.57
SSB-209ENST00000470621 SH3BP5O60239 455 aa5.27□□□□□ -1.57
SSB-209ENST00000470621 POLR2CP19387 275 aaPredicted RBP5.27□□□□□ -1.57
SSB-209ENST00000470621 GARSP41250 739 aaKnown RBP5.27□□□□□ -1.57
SSB-209ENST00000470621 SPOCK1Q08629 439 aa5.27□□□□□ -1.57
SSB-209ENST00000470621 ACSM2AQ08AH3 577 aa5.27□□□□□ -1.57
SSB-209ENST00000470621 SREBF2Q12772 1141 aa5.27□□□□□ -1.57
SSB-209ENST00000470621 MAMLD1Q13495 774 aa5.27□□□□□ -1.57
SSB-209ENST00000470621 PDE1CQ14123 709 aaPredicted RBP5.27□□□□□ -1.57
SSB-209ENST00000470621 ACSM2BQ68CK6 577 aa5.27□□□□□ -1.57
SSB-209ENST00000470621 PMS2CLQ68D20 193 aa5.27□□□□□ -1.57
SSB-209ENST00000470621 OR7E24Q6IFN5 339 aa5.27□□□□□ -1.57
SSB-209ENST00000470621 MEX3BQ6ZN04 569 aaKnown RBP5.27□□□□□ -1.57
SSB-209ENST00000470621 USP43Q70EL4 1123 aa5.27□□□□□ -1.57
SSB-209ENST00000470621 MAP7D3Q8IWC1 876 aa5.27□□□□□ -1.57
SSB-209ENST00000470621 THAP6Q8TBB0 222 aa5.27□□□□□ -1.57
SSB-209ENST00000470621 SCFD2Q8WU76 684 aa5.27□□□□□ -1.57
SSB-209ENST00000470621 DNASE2BQ8WZ79 361 aa5.27□□□□□ -1.57
SSB-209ENST00000470621 INPP4AQ96PE3 977 aaPredicted RBP5.27□□□□□ -1.57
SSB-209ENST00000470621 SRSF8Q9BRL6 282 aaKnown RBP5.27□□□□□ -1.57
SSB-209ENST00000470621 PLK3Q9H4B4 646 aa5.27□□□□□ -1.57
SSB-209ENST00000470621 ZHX3Q9H4I2 956 aa5.27□□□□□ -1.57
SSB-209ENST00000470621 MAGIXQ9H6Y5 334 aa5.27□□□□□ -1.57
SSB-209ENST00000470621 SH2D4AQ9H788 454 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms