RNA–Protein interactions for RNA: ENST00000465312.5

SCAMP3-204, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 715 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-204ENST00000465312 MROH6A6NGR9 719 aa18.34■□□□□ 0.53
SCAMP3-204ENST00000465312 SDR42E2A6NKP2 422 aa18.34■□□□□ 0.53
SCAMP3-204ENST00000465312 SMAPO00193 183 aa18.34■□□□□ 0.53
SCAMP3-204ENST00000465312 SEC31AO94979 1220 aaKnown RBP18.34■□□□□ 0.53
SCAMP3-204ENST00000465312 MSH3P20585 1137 aa18.34■□□□□ 0.53
SCAMP3-204ENST00000465312 RXRGP48443 463 aa18.34■□□□□ 0.53
SCAMP3-204ENST00000465312 SMAD1Q15797 465 aaKnown RBP18.34■□□□□ 0.53
SCAMP3-204ENST00000465312 AFTPHQ6ULP2 937 aa18.34■□□□□ 0.53
SCAMP3-204ENST00000465312 CES3Q6UWW8 571 aa18.34■□□□□ 0.53
SCAMP3-204ENST00000465312 GALNT13Q8IUC8 556 aa18.34■□□□□ 0.53
SCAMP3-204ENST00000465312 PDIK1LQ8N165 341 aa18.34■□□□□ 0.53
SCAMP3-204ENST00000465312 MPP5Q8N3R9 675 aa18.34■□□□□ 0.53
SCAMP3-204ENST00000465312 HDAC10Q969S8 669 aa18.34■□□□□ 0.53
SCAMP3-204ENST00000465312 ZNF669Q96BR6 464 aaPredicted RBP18.34■□□□□ 0.53
SCAMP3-204ENST00000465312 ULK4Q96C45 1275 aa18.34■□□□□ 0.53
SCAMP3-204ENST00000465312 DCUN1D1Q96GG9 259 aa18.34■□□□□ 0.53
SCAMP3-204ENST00000465312 CDKN2AIPNLQ96HQ2 116 aa18.34■□□□□ 0.53
SCAMP3-204ENST00000465312 COX14Q96I36 57 aa18.34■□□□□ 0.53
SCAMP3-204ENST00000465312 ZNF778Q96MU6 729 aa18.34■□□□□ 0.53
SCAMP3-204ENST00000465312 VPS35Q96QK1 796 aa18.34■□□□□ 0.53
SCAMP3-204ENST00000465312 LRRC1Q9BTT6 524 aa18.34■□□□□ 0.53
SCAMP3-204ENST00000465312 FRMD8Q9BZ67 464 aaPredicted RBP18.34■□□□□ 0.53
SCAMP3-204ENST00000465312 CAAP1Q9H8G2 361 aa18.34■□□□□ 0.53
SCAMP3-204ENST00000465312 KLF15Q9UIH9 416 aa18.34■□□□□ 0.53
SCAMP3-204ENST00000465312 WDR87Q6ZQQ6 2873 aa18.34■□□□□ 0.53
SCAMP3-204ENST00000465312 ZNF106Q9H2Y7 1883 aaKnown RBP18.33■□□□□ 0.53
SCAMP3-204ENST00000465312 PTPRZ1P23471 2315 aaPredicted RBP18.33■□□□□ 0.53
SCAMP3-204ENST00000465312 KNL1Q8NG31 2342 aa18.33■□□□□ 0.53
SCAMP3-204ENST00000465312 OR51F1A6NGY5 319 aa18.33■□□□□ 0.52
SCAMP3-204ENST00000465312 TNFRSF10CO14798 259 aa18.33■□□□□ 0.52
SCAMP3-204ENST00000465312 AQP9O43315 295 aa18.33■□□□□ 0.52
SCAMP3-204ENST00000465312 ZNF500O60304 480 aaPredicted RBP18.33■□□□□ 0.52
SCAMP3-204ENST00000465312 PIAS2O75928 621 aa18.33■□□□□ 0.52
SCAMP3-204ENST00000465312 CEACAM5P06731 702 aa18.33■□□□□ 0.52
SCAMP3-204ENST00000465312 ZNF883P0CG24 379 aa18.33■□□□□ 0.52
SCAMP3-204ENST00000465312 ALPPL2P10696 532 aa18.33■□□□□ 0.52
SCAMP3-204ENST00000465312 PAMP19021 973 aa18.33■□□□□ 0.52
SCAMP3-204ENST00000465312 IVDP26440 423 aa18.33■□□□□ 0.52
SCAMP3-204ENST00000465312 ARSDP51689 593 aa18.33■□□□□ 0.52
SCAMP3-204ENST00000465312 ARL4CP56559 192 aa18.33■□□□□ 0.52
SCAMP3-204ENST00000465312 CACNG1Q06432 222 aa18.33■□□□□ 0.52
SCAMP3-204ENST00000465312 NFATC2Q13469 925 aa18.33■□□□□ 0.52
SCAMP3-204ENST00000465312 PEX6Q13608 980 aa18.33■□□□□ 0.52
SCAMP3-204ENST00000465312 RSPO4Q2I0M5 234 aaPredicted RBP18.33■□□□□ 0.52
SCAMP3-204ENST00000465312 LDLRAP1Q5SW96 308 aa18.33■□□□□ 0.52
SCAMP3-204ENST00000465312 HIBCHQ6NVY1 386 aaPredicted RBP18.33■□□□□ 0.52
SCAMP3-204ENST00000465312 CRTC3Q6UUV7 619 aa18.33■□□□□ 0.52
SCAMP3-204ENST00000465312 SNX20Q7Z614 316 aa18.33■□□□□ 0.52
SCAMP3-204ENST00000465312 ZNF548Q8NEK5 533 aaPredicted RBP18.33■□□□□ 0.52
SCAMP3-204ENST00000465312 RHBDD1Q8TEB9 315 aa18.33■□□□□ 0.52
SCAMP3-204ENST00000465312 PTCD2Q8WV60 388 aaKnown RBP18.33■□□□□ 0.52
SCAMP3-204ENST00000465312 TRIM39Q9HCM9 518 aa18.33■□□□□ 0.52
SCAMP3-204ENST00000465312 UCKL1Q9NWZ5 548 aa18.33■□□□□ 0.52
SCAMP3-204ENST00000465312 CNOT6Q9ULM6 557 aaKnown RBP18.33■□□□□ 0.52
SCAMP3-204ENST00000465312 SOX13Q9UN79 622 aa18.33■□□□□ 0.52
SCAMP3-204ENST00000465312 PRKAB1Q9Y478 270 aa18.33■□□□□ 0.52
SCAMP3-204ENST00000465312 LAMA1P25391 3075 aa18.33■□□□□ 0.52
SCAMP3-204ENST00000465312 CCDC162PA2VCL2 907 aa18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 NEMP2A6NFY4 417 aa18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 GAPDHSO14556 408 aaPredicted RBP18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 FLRT2O43155 660 aa18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 BANF1O75531 89 aa18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 CDK14O94921 469 aa18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 GOT2P00505 430 aaKnown RBP18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 ANXA6P08133 673 aa18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 RALBP11234 206 aa18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 DGKAP23743 735 aa18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 NMBRP28336 390 aa18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 LIMK1P53667 647 aa18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 XIAPP98170 497 aa18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 DHX9Q08211 1270 aaKnown RBP18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 SLC14A1Q13336 389 aa18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 ELOCQ15369 112 aa18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 SHBQ15464 509 aa18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 HIF1AQ16665 826 aa18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 PLA2G4EQ3MJ16 856 aa18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 FASTKD1Q53R41 847 aaKnown RBP18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 GPRC6AQ5T6X5 926 aa18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 KCTD16Q68DU8 428 aa18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 MICALCLQ6ZW33 695 aa18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 DET1Q7L5Y6 550 aa18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 TAF8Q7Z7C8 310 aa18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 TRAPPC5Q8IUR0 188 aa18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 NAXDQ8IW45 347 aa18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 MMGT1Q8N4V1 131 aa18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 EID2Q8N6I1 236 aa18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 NOA1Q8NC60 698 aaKnown RBP18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 OR13J1Q8NGT2 312 aa18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 STAMBPL1Q96FJ0 436 aa18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 OR2M4Q96R27 311 aa18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 TTC1Q99614 292 aa18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 LRRC61Q9BV99 259 aa18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 VPS18Q9P253 973 aa18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 ATXN10Q9UBB4 475 aa18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 PNMA8BQ9ULN7 279 aaPredicted RBP18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 SLC17A4Q9Y2C5 497 aa18.32■□□□□ 0.52
SCAMP3-204ENST00000465312 CFAP99D6REC4 459 aa18.31■□□□□ 0.52
SCAMP3-204ENST00000465312 H7C0S8 307 aa18.31■□□□□ 0.52
SCAMP3-204ENST00000465312 VEGFDO43915 354 aa18.31■□□□□ 0.52
SCAMP3-204ENST00000465312 SH3BP5O60239 455 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms