RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 CCDC157Q569K6 752 aa12.93□□□□□ -0.34
R3HDM1-213ENST00000463230 CERCAMQ5T4B2 595 aa12.93□□□□□ -0.34
R3HDM1-213ENST00000463230 HES3Q5TGS1 186 aa12.93□□□□□ -0.34
R3HDM1-213ENST00000463230 GUSBP11Q6P575 273 aa12.93□□□□□ -0.34
R3HDM1-213ENST00000463230 NYAP1Q6ZVC0 841 aa12.93□□□□□ -0.34
R3HDM1-213ENST00000463230 TRIM74Q86UV6 250 aa12.93□□□□□ -0.34
R3HDM1-213ENST00000463230 AVL9Q8NBF6 648 aa12.93□□□□□ -0.34
R3HDM1-213ENST00000463230 MAPK15Q8TD08 544 aa12.93□□□□□ -0.34
R3HDM1-213ENST00000463230 DEPDC7Q96QD5 511 aa12.93□□□□□ -0.34
R3HDM1-213ENST00000463230 TMEM121BQ9BXQ6 578 aaPredicted RBP12.93□□□□□ -0.34
R3HDM1-213ENST00000463230 GPSM3Q9Y4H4 160 aa12.93□□□□□ -0.34
R3HDM1-213ENST00000463230 NUDT21O43809 227 aaKnown RBP12.93□□□□□ -0.34
R3HDM1-213ENST00000463230 NOBOXO60393 691 aa12.93□□□□□ -0.34
R3HDM1-213ENST00000463230 GLB1P16278 677 aa12.93□□□□□ -0.34
R3HDM1-213ENST00000463230 ZNF140P52738 457 aaPredicted RBP12.93□□□□□ -0.34
R3HDM1-213ENST00000463230 GTF2H3Q13889 308 aa12.93□□□□□ -0.34
R3HDM1-213ENST00000463230 ARMC3Q5W041 872 aa12.93□□□□□ -0.34
R3HDM1-213ENST00000463230 ADGRG6Q86SQ4 1221 aa12.93□□□□□ -0.34
R3HDM1-213ENST00000463230 PDCD7Q8N8D1 485 aaKnown RBP12.93□□□□□ -0.34
R3HDM1-213ENST00000463230 DDHD1Q8NEL9 900 aa12.93□□□□□ -0.34
R3HDM1-213ENST00000463230 ULK4Q96C45 1275 aa12.93□□□□□ -0.34
R3HDM1-213ENST00000463230 TIMM29Q9BSF4 260 aa12.93□□□□□ -0.34
R3HDM1-213ENST00000463230 ABCG4Q9H172 646 aa12.93□□□□□ -0.34
R3HDM1-213ENST00000463230 ATXN10Q9UBB4 475 aa12.93□□□□□ -0.34
R3HDM1-213ENST00000463230 GULP1Q9UBP9 304 aa12.93□□□□□ -0.34
R3HDM1-213ENST00000463230 DKK4Q9UBT3 224 aa12.93□□□□□ -0.34
R3HDM1-213ENST00000463230 RIMKLBQ9ULI2 386 aa12.93□□□□□ -0.34
R3HDM1-213ENST00000463230 PLXNB3Q9ULL4 1909 aa12.93□□□□□ -0.34
R3HDM1-213ENST00000463230 ZFC3H1O60293 1989 aaKnown RBP12.93□□□□□ -0.34
R3HDM1-213ENST00000463230 CPED1A4D0V7 1026 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 KLHL33A6NCF5 533 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 KMOO15229 486 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 GRID2O43424 1007 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 MT-CO3P00414 261 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 IFNB1P01574 187 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 PROS1P07225 676 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 JUPP14923 745 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 CDH17Q12864 832 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 SNX1Q13596 522 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 HLTFQ14527 1009 aaKnown RBP eCLIP12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 NR1D2Q14995 579 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 ATP13A5Q4VNC0 1218 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 UNQ6494/PRO21346Q6UXR6 183 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 ZNF438Q7Z4V0 828 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 SLC35F6Q8N357 371 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 ACTRT1Q8TDG2 376 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 ZDHHC1Q8WTX9 485 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 HEXDCQ8WVB3 486 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 APOL2Q9BQE5 337 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 DPEP2Q9H4A9 486 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 ETNK1Q9HBU6 452 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 BPIFA1Q9NP55 256 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 ZNHIT2Q9UHR6 403 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 CLCA2Q9UQC9 943 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 DNMT3AQ9Y6K1 912 aaPredicted RBP12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 E7EVH7 732 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 H7C0S8 307 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 PGRMC1O00264 195 aaKnown RBP12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 SPINK2P20155 84 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 ACTR1BP42025 376 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 ACTR1AP61163 376 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 CHRNA6Q15825 494 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 CYP1B1Q16678 543 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 LRRTM4Q86VH4 590 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 PRELID2Q8N945 189 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 OR4K2Q8NGD2 314 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 CCL4L1Q8NHW4 92 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 PTCD2Q8WV60 388 aaKnown RBP12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 ZNF514Q96K75 400 aaPredicted RBP12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 RANBP9Q96S59 729 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 OR2AG1Q9H205 316 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 SPATS2LQ9NUQ6 558 aaKnown RBP12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 SIRPGQ9P1W8 387 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 ARL5AQ9Y689 179 aa12.92□□□□□ -0.34
R3HDM1-213ENST00000463230 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.91□□□□□ -0.34
R3HDM1-213ENST00000463230 OR5K4A6NMS3 321 aa12.91□□□□□ -0.34
R3HDM1-213ENST00000463230 B4DGG1 531 aa12.91□□□□□ -0.34
R3HDM1-213ENST00000463230 TMX2-CTNND1H3BSU7 103 aa12.91□□□□□ -0.34
R3HDM1-213ENST00000463230 GAPDHSO14556 408 aaPredicted RBP12.91□□□□□ -0.34
R3HDM1-213ENST00000463230 LDB2O43679 373 aa12.91□□□□□ -0.34
R3HDM1-213ENST00000463230 ATP1A1P05023 1023 aaKnown RBP12.91□□□□□ -0.34
R3HDM1-213ENST00000463230 ZNF8P17098 575 aaPredicted RBP12.91□□□□□ -0.34
R3HDM1-213ENST00000463230 TCP1P17987 556 aaKnown RBP12.91□□□□□ -0.34
R3HDM1-213ENST00000463230 VCLP18206 1134 aa12.91□□□□□ -0.34
R3HDM1-213ENST00000463230 CXCR5P32302 372 aa12.91□□□□□ -0.34
R3HDM1-213ENST00000463230 LMAN1P49257 510 aa12.91□□□□□ -0.34
R3HDM1-213ENST00000463230 CDK16Q00536 496 aa12.91□□□□□ -0.34
R3HDM1-213ENST00000463230 SPARCL1Q14515 664 aa12.91□□□□□ -0.34
R3HDM1-213ENST00000463230 GPR33Q49SQ1 333 aa12.91□□□□□ -0.34
R3HDM1-213ENST00000463230 MARK2Q7KZI7 788 aaKnown RBP12.91□□□□□ -0.34
R3HDM1-213ENST00000463230 NLRP9Q7RTR0 991 aa12.91□□□□□ -0.34
R3HDM1-213ENST00000463230 GSTA5Q7RTV2 222 aa12.91□□□□□ -0.34
R3HDM1-213ENST00000463230 KDF1Q8NAX2 398 aaPredicted RBP12.91□□□□□ -0.34
R3HDM1-213ENST00000463230 ZNF398Q8TD17 642 aa12.91□□□□□ -0.34
R3HDM1-213ENST00000463230 STYXQ8WUJ0 223 aa12.91□□□□□ -0.34
R3HDM1-213ENST00000463230 PEX13Q92968 403 aa12.91□□□□□ -0.34
R3HDM1-213ENST00000463230 CCDC74AQ96AQ1 378 aa12.91□□□□□ -0.34
R3HDM1-213ENST00000463230 NXPE2Q96DL1 559 aa12.91□□□□□ -0.34
R3HDM1-213ENST00000463230 OSBPL9Q96SU4 736 aa12.91□□□□□ -0.34
R3HDM1-213ENST00000463230 CCDC3Q9BQI4 270 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms