RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 NUAK1O60285 661 aa15.96■□□□□ 0.15
COL7A1-203ENST00000459756 SLC25A14O95258 325 aaPredicted RBP15.96■□□□□ 0.15
COL7A1-203ENST00000459756 FTCDO95954 541 aa15.96■□□□□ 0.15
COL7A1-203ENST00000459756 PTMAP06454 111 aaKnown RBP15.96■□□□□ 0.15
COL7A1-203ENST00000459756 RBMS1P29558 406 aaKnown RBP15.96■□□□□ 0.15
COL7A1-203ENST00000459756 CCKBRP32239 447 aa15.96■□□□□ 0.15
COL7A1-203ENST00000459756 MLLT3P42568 568 aaPredicted RBP15.96■□□□□ 0.15
COL7A1-203ENST00000459756 CHRNA4P43681 627 aa15.96■□□□□ 0.15
COL7A1-203ENST00000459756 GPR3P46089 330 aa15.96■□□□□ 0.15
COL7A1-203ENST00000459756 GEMP55040 296 aa15.96■□□□□ 0.15
COL7A1-203ENST00000459756 INHBCP55103 352 aa15.96■□□□□ 0.15
COL7A1-203ENST00000459756 B4GALNT1Q00973 533 aa15.96■□□□□ 0.15
COL7A1-203ENST00000459756 EIF3IQ13347 325 aaKnown RBP15.96■□□□□ 0.15
COL7A1-203ENST00000459756 NR1D2Q14995 579 aa15.96■□□□□ 0.15
COL7A1-203ENST00000459756 ZDHHC20Q5W0Z9 365 aa15.96■□□□□ 0.15
COL7A1-203ENST00000459756 AADACL2Q6P093 401 aa15.96■□□□□ 0.15
COL7A1-203ENST00000459756 DARS2Q6PI48 645 aaKnown RBP15.96■□□□□ 0.15
COL7A1-203ENST00000459756 LRRC69Q6ZNQ3 347 aa15.96■□□□□ 0.15
COL7A1-203ENST00000459756 B3GNT8Q7Z7M8 397 aa15.96■□□□□ 0.15
COL7A1-203ENST00000459756 PHYKPLQ8IUZ5 450 aa15.96■□□□□ 0.15
COL7A1-203ENST00000459756 SLC25A41Q8N5S1 370 aa15.96■□□□□ 0.15
COL7A1-203ENST00000459756 GLYATL1Q969I3 302 aa15.96■□□□□ 0.15
COL7A1-203ENST00000459756 C10orf88Q9H8K7 445 aa15.96■□□□□ 0.15
COL7A1-203ENST00000459756 ASCL3Q9NQ33 180 aa15.96■□□□□ 0.15
COL7A1-203ENST00000459756 THSD1Q9NS62 852 aa15.96■□□□□ 0.15
COL7A1-203ENST00000459756 ATXN10Q9UBB4 475 aa15.96■□□□□ 0.15
COL7A1-203ENST00000459756 AAR2Q9Y312 384 aaKnown RBP15.96■□□□□ 0.15
COL7A1-203ENST00000459756 UNC13CQ8NB66 2214 aa15.96■□□□□ 0.15
COL7A1-203ENST00000459756 SCN8AQ9UQD0 1980 aa15.96■□□□□ 0.15
COL7A1-203ENST00000459756 A0A0U1RQJ8 604 aa15.95■□□□□ 0.14
COL7A1-203ENST00000459756 A0A1W2PNU3 283 aaPredicted RBP15.95■□□□□ 0.14
COL7A1-203ENST00000459756 KCNN4O15554 427 aa15.95■□□□□ 0.14
COL7A1-203ENST00000459756 GRID2O43424 1007 aa15.95■□□□□ 0.14
COL7A1-203ENST00000459756 PCBP4P57723 403 aaKnown RBP15.95■□□□□ 0.14
COL7A1-203ENST00000459756 PRPSAP1Q14558 356 aa15.95■□□□□ 0.14
COL7A1-203ENST00000459756 CLPPQ16740 277 aaPredicted RBP15.95■□□□□ 0.14
COL7A1-203ENST00000459756 COL28A1Q2UY09 1125 aa15.95■□□□□ 0.14
COL7A1-203ENST00000459756 ANKRD20A2Q5SQ80 823 aa15.95■□□□□ 0.14
COL7A1-203ENST00000459756 ANKRD20A1Q5TYW2 823 aa15.95■□□□□ 0.14
COL7A1-203ENST00000459756 ANKRD20A3Q5VUR7 823 aa15.95■□□□□ 0.14
COL7A1-203ENST00000459756 CHST15Q7LFX5 561 aaPredicted RBP15.95■□□□□ 0.14
COL7A1-203ENST00000459756 TTC30BQ8N4P2 665 aa15.95■□□□□ 0.14
COL7A1-203ENST00000459756 TTC13Q8NBP0 860 aa15.95■□□□□ 0.14
COL7A1-203ENST00000459756 DTX3LQ8TDB6 740 aa15.95■□□□□ 0.14
COL7A1-203ENST00000459756 UBE2Q2Q8WVN8 375 aa15.95■□□□□ 0.14
COL7A1-203ENST00000459756 PATE1Q8WXA2 126 aa15.95■□□□□ 0.14
COL7A1-203ENST00000459756 SLC46A1Q96NT5 459 aa15.95■□□□□ 0.14
COL7A1-203ENST00000459756 PPP1R2P1Q96PQ5 205 aa15.95■□□□□ 0.14
COL7A1-203ENST00000459756 VPS35Q96QK1 796 aa15.95■□□□□ 0.14
COL7A1-203ENST00000459756 FOXP3Q9BZS1 431 aa15.95■□□□□ 0.14
COL7A1-203ENST00000459756 TSGA10Q9BZW7 698 aa15.95■□□□□ 0.14
COL7A1-203ENST00000459756 OR2AG1Q9H205 316 aa15.95■□□□□ 0.14
COL7A1-203ENST00000459756 EPB41L5Q9HCM4 733 aa15.95■□□□□ 0.14
COL7A1-203ENST00000459756 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.95■□□□□ 0.14
COL7A1-203ENST00000459756 ATXN7L1Q9ULK2 861 aaPredicted RBP15.95■□□□□ 0.14
COL7A1-203ENST00000459756 PACSIN2Q9UNF0 486 aaPredicted RBP15.95■□□□□ 0.14
COL7A1-203ENST00000459756 PRKAB1Q9Y478 270 aa15.95■□□□□ 0.14
COL7A1-203ENST00000459756 PCYT1BQ9Y5K3 369 aaPredicted RBP15.95■□□□□ 0.14
COL7A1-203ENST00000459756 ZFYVE26Q68DK2 2539 aa15.95■□□□□ 0.14
COL7A1-203ENST00000459756 BPTFQ12830 3046 aa15.94■□□□□ 0.14
COL7A1-203ENST00000459756 KIF26BQ2KJY2 2108 aa15.94■□□□□ 0.14
COL7A1-203ENST00000459756 PLD2O14939 933 aa15.94■□□□□ 0.14
COL7A1-203ENST00000459756 DDX3YO15523 660 aaKnown RBP15.94■□□□□ 0.14
COL7A1-203ENST00000459756 B4GAT1O43505 415 aa15.94■□□□□ 0.14
COL7A1-203ENST00000459756 PPFIA2O75334 1257 aa15.94■□□□□ 0.14
COL7A1-203ENST00000459756 CPNE6O95741 557 aa15.94■□□□□ 0.14
COL7A1-203ENST00000459756 ACP5P13686 325 aa15.94■□□□□ 0.14
COL7A1-203ENST00000459756 ZNF8P17098 575 aaPredicted RBP15.94■□□□□ 0.14
COL7A1-203ENST00000459756 ALDH4A1P30038 563 aa15.94■□□□□ 0.14
COL7A1-203ENST00000459756 ABCG1P45844 678 aa15.94■□□□□ 0.14
COL7A1-203ENST00000459756 OR1D5P58170 312 aa15.94■□□□□ 0.14
COL7A1-203ENST00000459756 ZFP36L1Q07352 338 aaKnown RBP15.94■□□□□ 0.14
COL7A1-203ENST00000459756 GLT6D1Q7Z4J2 308 aa15.94■□□□□ 0.14
COL7A1-203ENST00000459756 SFRP1Q8N474 314 aa15.94■□□□□ 0.14
COL7A1-203ENST00000459756 ZNF248Q8NDW4 579 aa15.94■□□□□ 0.14
COL7A1-203ENST00000459756 BLOC1S5Q8TDH9 187 aa15.94■□□□□ 0.14
COL7A1-203ENST00000459756 ANP32BQ92688 251 aaKnown RBP15.94■□□□□ 0.14
COL7A1-203ENST00000459756 PRR11Q96HE9 360 aaPredicted RBP15.94■□□□□ 0.14
COL7A1-203ENST00000459756 HES6Q96HZ4 224 aa15.94■□□□□ 0.14
COL7A1-203ENST00000459756 SPATA13Q96N96 652 aa15.94■□□□□ 0.14
COL7A1-203ENST00000459756 FAM118BQ9BPY3 351 aa15.94■□□□□ 0.14
COL7A1-203ENST00000459756 GORASP1Q9BQQ3 440 aa15.94■□□□□ 0.14
COL7A1-203ENST00000459756 BPIFA1Q9NP55 256 aa15.94■□□□□ 0.14
COL7A1-203ENST00000459756 ARFGAP3Q9NP61 516 aa15.94■□□□□ 0.14
COL7A1-203ENST00000459756 IL17CQ9P0M4 197 aa15.94■□□□□ 0.14
COL7A1-203ENST00000459756 PKP3Q9Y446 797 aa15.94■□□□□ 0.14
COL7A1-203ENST00000459756 ADGRG1Q9Y653 693 aa15.94■□□□□ 0.14
COL7A1-203ENST00000459756 CAPN6Q9Y6Q1 641 aa15.94■□□□□ 0.14
COL7A1-203ENST00000459756 CHUKO15111 745 aa15.93■□□□□ 0.14
COL7A1-203ENST00000459756 PPM1DO15297 605 aa15.93■□□□□ 0.14
COL7A1-203ENST00000459756 ARHGAP6O43182 974 aa15.93■□□□□ 0.14
COL7A1-203ENST00000459756 KRT86O43790 486 aa15.93■□□□□ 0.14
COL7A1-203ENST00000459756 VEGFDO43915 354 aa15.93■□□□□ 0.14
COL7A1-203ENST00000459756 AGTP01019 485 aa15.93■□□□□ 0.14
COL7A1-203ENST00000459756 ITGA2BP08514 1039 aa15.93■□□□□ 0.14
COL7A1-203ENST00000459756 SLC2A4P14672 509 aa15.93■□□□□ 0.14
COL7A1-203ENST00000459756 PSMB4P28070 264 aa15.93■□□□□ 0.14
COL7A1-203ENST00000459756 SPAM1P38567 509 aa15.93■□□□□ 0.14
COL7A1-203ENST00000459756 FASLGP48023 281 aa15.93■□□□□ 0.14
COL7A1-203ENST00000459756 KLF1Q13351 362 aaPredicted RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms