RNA–Protein interactions for RNA: ENST00000458337.5

COMMD1-206, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-206ENST00000458337 CCDC86Q9H6F5 360 aaKnown RBP13.2□□□□□ -0.3
COMMD1-206ENST00000458337 BPIFA1Q9NP55 256 aa13.2□□□□□ -0.3
COMMD1-206ENST00000458337 ATXN10Q9UBB4 475 aa13.2□□□□□ -0.3
COMMD1-206ENST00000458337 ZNHIT2Q9UHR6 403 aa13.2□□□□□ -0.3
COMMD1-206ENST00000458337 FEZ2Q9UHY8 353 aaPredicted RBP13.2□□□□□ -0.3
COMMD1-206ENST00000458337 ZMIZ1Q9ULJ6 1067 aa13.2□□□□□ -0.3
COMMD1-206ENST00000458337 PKD1L2Q7Z442 2459 aa13.19□□□□□ -0.3
COMMD1-206ENST00000458337 GAPDHSO14556 408 aaPredicted RBP13.19□□□□□ -0.3
COMMD1-206ENST00000458337 PSMD3O43242 534 aa13.19□□□□□ -0.3
COMMD1-206ENST00000458337 VEGFDO43915 354 aa13.19□□□□□ -0.3
COMMD1-206ENST00000458337 ZNF8P17098 575 aaPredicted RBP13.19□□□□□ -0.3
COMMD1-206ENST00000458337 LPOP22079 712 aaPredicted RBP13.19□□□□□ -0.3
COMMD1-206ENST00000458337 CLCNKAP51800 687 aa13.19□□□□□ -0.3
COMMD1-206ENST00000458337 CYP4F3Q08477 520 aa13.19□□□□□ -0.3
COMMD1-206ENST00000458337 OLIG2Q13516 323 aa13.19□□□□□ -0.3
COMMD1-206ENST00000458337 NR1D2Q14995 579 aa13.19□□□□□ -0.3
COMMD1-206ENST00000458337 CCNG2Q16589 344 aa13.19□□□□□ -0.3
COMMD1-206ENST00000458337 ISXQ2M1V0 245 aa13.19□□□□□ -0.3
COMMD1-206ENST00000458337 P3H1Q32P28 736 aa13.19□□□□□ -0.3
COMMD1-206ENST00000458337 ATP13A5Q4VNC0 1218 aa13.19□□□□□ -0.3
COMMD1-206ENST00000458337 ZNF569Q5MCW4 686 aa13.19□□□□□ -0.3
COMMD1-206ENST00000458337 DRICH1Q6PGQ1 229 aaPredicted RBP13.19□□□□□ -0.3
COMMD1-206ENST00000458337 SLC30A9Q6PML9 568 aa13.19□□□□□ -0.3
COMMD1-206ENST00000458337 ARHGEF18Q6ZSZ5 1173 aa13.19□□□□□ -0.3
COMMD1-206ENST00000458337 MARK2Q7KZI7 788 aaKnown RBP13.19□□□□□ -0.3
COMMD1-206ENST00000458337 GLT6D1Q7Z4J2 308 aa13.19□□□□□ -0.3
COMMD1-206ENST00000458337 ZNF438Q7Z4V0 828 aa13.19□□□□□ -0.3
COMMD1-206ENST00000458337 PROSER1Q86XN7 944 aa13.19□□□□□ -0.3
COMMD1-206ENST00000458337 NAGSQ8N159 534 aa13.19□□□□□ -0.3
COMMD1-206ENST00000458337 ARL14Q8N4G2 192 aa13.19□□□□□ -0.3
COMMD1-206ENST00000458337 ZDHHC1Q8WTX9 485 aa13.19□□□□□ -0.3
COMMD1-206ENST00000458337 ATG4AQ8WYN0 398 aa13.19□□□□□ -0.3
COMMD1-206ENST00000458337 CCDC74AQ96AQ1 378 aa13.19□□□□□ -0.3
COMMD1-206ENST00000458337 DEPDC7Q96QD5 511 aa13.19□□□□□ -0.3
COMMD1-206ENST00000458337 TBL1YQ9BQ87 522 aa13.19□□□□□ -0.3
COMMD1-206ENST00000458337 LRIT1Q9P2V4 623 aa13.19□□□□□ -0.3
COMMD1-206ENST00000458337 DRG1Q9Y295 367 aaKnown RBP13.19□□□□□ -0.3
COMMD1-206ENST00000458337 RNF215Q9Y6U7 377 aa13.19□□□□□ -0.3
COMMD1-206ENST00000458337 A0A1W2PQM1 296 aa13.18□□□□□ -0.3
COMMD1-206ENST00000458337 PRR19A6NJB7 356 aa13.18□□□□□ -0.3
COMMD1-206ENST00000458337 C2orf81A6NN90 581 aa13.18□□□□□ -0.3
COMMD1-206ENST00000458337 B4DGG1 531 aa13.18□□□□□ -0.3
COMMD1-206ENST00000458337 CASC3O15234 703 aaKnown RBP13.18□□□□□ -0.3
COMMD1-206ENST00000458337 STX7O15400 261 aaKnown RBP13.18□□□□□ -0.3
COMMD1-206ENST00000458337 GRID2O43424 1007 aa13.18□□□□□ -0.3
COMMD1-206ENST00000458337 ECEL1O95672 775 aa13.18□□□□□ -0.3
COMMD1-206ENST00000458337 SPAM1P38567 509 aa13.18□□□□□ -0.3
COMMD1-206ENST00000458337 ACTR1BP42025 376 aa13.18□□□□□ -0.3
COMMD1-206ENST00000458337 ACTR1AP61163 376 aa13.18□□□□□ -0.3
COMMD1-206ENST00000458337 CCL7P80098 99 aa13.18□□□□□ -0.3
COMMD1-206ENST00000458337 B4GALNT1Q00973 533 aa13.18□□□□□ -0.3
COMMD1-206ENST00000458337 RBM44Q6ZP01 1051 aaKnown RBP13.18□□□□□ -0.3
COMMD1-206ENST00000458337 CHST15Q7LFX5 561 aaPredicted RBP13.18□□□□□ -0.3
COMMD1-206ENST00000458337 PHYKPLQ8IUZ5 450 aa13.18□□□□□ -0.3
COMMD1-206ENST00000458337 REXO1L1PQ8IX06 675 aa13.18□□□□□ -0.3
COMMD1-206ENST00000458337 MDM1Q8TC05 714 aa13.18□□□□□ -0.3
COMMD1-206ENST00000458337 C1orf54Q8WWF1 131 aa13.18□□□□□ -0.3
COMMD1-206ENST00000458337 ZCCHC14Q8WYQ9 949 aaKnown RBP13.18□□□□□ -0.3
COMMD1-206ENST00000458337 APOL2Q9BQE5 337 aa13.18□□□□□ -0.3
COMMD1-206ENST00000458337 OR2AG1Q9H205 316 aa13.18□□□□□ -0.3
COMMD1-206ENST00000458337 SUDS3Q9H7L9 328 aaPredicted RBP13.18□□□□□ -0.3
COMMD1-206ENST00000458337 ZKSCAN5Q9Y2L8 839 aa13.18□□□□□ -0.3
COMMD1-206ENST00000458337 PKP3Q9Y446 797 aa13.18□□□□□ -0.3
COMMD1-206ENST00000458337 PRKAB1Q9Y478 270 aa13.18□□□□□ -0.3
COMMD1-206ENST00000458337 ARL5AQ9Y689 179 aa13.18□□□□□ -0.3
COMMD1-206ENST00000458337 BPTFQ12830 3046 aa13.18□□□□□ -0.3
COMMD1-206ENST00000458337 GLYATL1P3A0A0U1RQE8 302 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 A6NCN8 305 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 SRRM3A6NNA2 597 aaPredicted RBP13.17□□□□□ -0.3
COMMD1-206ENST00000458337 AGAP14A8MT82 685 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 B4GAT1O43505 415 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 BUD23O43709 281 aaKnown RBP13.17□□□□□ -0.3
COMMD1-206ENST00000458337 UGT1A9O60656 530 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 USP12O75317 370 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 CSO75390 466 aaKnown RBP13.17□□□□□ -0.3
COMMD1-206ENST00000458337 CRTAMO95727 393 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 AP2A1O95782 977 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 SLC4A1P02730 911 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 UGT1A6P19224 532 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 UGT1A1P22309 533 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 UGT1A4P22310 534 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 PSMA3P25788 255 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 UGT1A3P35503 534 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 UGT1A5P35504 534 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 GPR3P46089 330 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 XIAPP98170 497 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 PDE1BQ01064 536 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 TMEM115Q12893 351 aaPredicted RBP13.17□□□□□ -0.3
COMMD1-206ENST00000458337 SQSTM1Q13501 440 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 SPARCL1Q14515 664 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 PTPRCAPQ14761 206 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 CHRNA6Q15825 494 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 KIF26BQ2KJY2 2108 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 KHDC1Q4VXA5 237 aaKnown RBP13.17□□□□□ -0.3
COMMD1-206ENST00000458337 ZNF648Q5T619 568 aaPredicted RBP13.17□□□□□ -0.3
COMMD1-206ENST00000458337 IYDQ6PHW0 289 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 ZNF547Q8IVP9 402 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 SFRP1Q8N474 314 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 OR4K2Q8NGD2 314 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 MAIP1Q8WWC4 291 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms