RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 CDH4P55283 916 aa18.53■□□□□ 0.56
SHANK3-203ENST00000445220 BCL2L1Q07817 233 aa18.53■□□□□ 0.56
SHANK3-203ENST00000445220 DEF8Q6ZN54 512 aa18.53■□□□□ 0.56
SHANK3-203ENST00000445220 ANKRD23Q86SG2 305 aa18.53■□□□□ 0.56
SHANK3-203ENST00000445220 FAM156AQ8NDB6 213 aa18.53■□□□□ 0.56
SHANK3-203ENST00000445220 P2RY11Q96G91 374 aa18.53■□□□□ 0.56
SHANK3-203ENST00000445220 TRIT1Q9H3H1 467 aaKnown RBP18.53■□□□□ 0.56
SHANK3-203ENST00000445220 PCDH18Q9HCL0 1135 aa18.53■□□□□ 0.56
SHANK3-203ENST00000445220 MTRRQ9UBK8 725 aa18.53■□□□□ 0.56
SHANK3-203ENST00000445220 PSME2Q9UL46 239 aa18.53■□□□□ 0.56
SHANK3-203ENST00000445220 PHLPP1O60346 1717 aa18.53■□□□□ 0.56
SHANK3-203ENST00000445220 SPATA31C2B4DYI2 1134 aa18.53■□□□□ 0.56
SHANK3-203ENST00000445220 SNX4O95219 450 aa18.53■□□□□ 0.56
SHANK3-203ENST00000445220 SPATA31C1P0DKV0 1188 aa18.53■□□□□ 0.56
SHANK3-203ENST00000445220 RBM48Q5RL73 367 aaKnown RBP18.53■□□□□ 0.56
SHANK3-203ENST00000445220 ZNF613Q6PF04 617 aa18.53■□□□□ 0.56
SHANK3-203ENST00000445220 TNFRSF25Q93038 417 aa18.53■□□□□ 0.56
SHANK3-203ENST00000445220 VMP1Q96GC9 406 aa18.53■□□□□ 0.56
SHANK3-203ENST00000445220 OSGEPL1Q9H4B0 414 aa18.53■□□□□ 0.56
SHANK3-203ENST00000445220 SLC35C2Q9NQQ7 365 aa18.53■□□□□ 0.56
SHANK3-203ENST00000445220 UXTQ9UBK9 157 aaPredicted RBP18.53■□□□□ 0.56
SHANK3-203ENST00000445220 RPN2P04844 631 aa18.53■□□□□ 0.56
SHANK3-203ENST00000445220 ITGA3P26006 1051 aa18.53■□□□□ 0.56
SHANK3-203ENST00000445220 BIKQ13323 160 aa18.53■□□□□ 0.56
SHANK3-203ENST00000445220 SMG8Q8ND04 991 aaKnown RBP18.53■□□□□ 0.56
SHANK3-203ENST00000445220 TWIST2Q8WVJ9 160 aa18.53■□□□□ 0.56
SHANK3-203ENST00000445220 KCNS3Q9BQ31 491 aa18.53■□□□□ 0.56
SHANK3-203ENST00000445220 NRG1Q02297 640 aaPredicted RBP18.52■□□□□ 0.56
SHANK3-203ENST00000445220 PPM1JQ5JR12 505 aa18.52■□□□□ 0.56
SHANK3-203ENST00000445220 LAPTM4BQ86VI4 370 aa18.52■□□□□ 0.56
SHANK3-203ENST00000445220 TBC1D24Q9ULP9 559 aa18.52■□□□□ 0.56
SHANK3-203ENST00000445220 GABBR2O75899 941 aa18.52■□□□□ 0.56
SHANK3-203ENST00000445220 PTPN1P18031 435 aaKnown RBP18.52■□□□□ 0.56
SHANK3-203ENST00000445220 VBP1P61758 197 aa18.52■□□□□ 0.56
SHANK3-203ENST00000445220 CPSF6Q16630 551 aaKnown RBP eCLIP18.52■□□□□ 0.56
SHANK3-203ENST00000445220 CRY2Q49AN0 593 aa18.52■□□□□ 0.56
SHANK3-203ENST00000445220 RNASE12Q5GAN4 147 aaKnown RBP18.52■□□□□ 0.56
SHANK3-203ENST00000445220 TMEM214Q6NUQ4 689 aaKnown RBP18.52■□□□□ 0.56
SHANK3-203ENST00000445220 LGI2Q8N0V4 545 aa18.52■□□□□ 0.56
SHANK3-203ENST00000445220 UROC1Q96N76 676 aa18.52■□□□□ 0.56
SHANK3-203ENST00000445220 ACO2Q99798 780 aaKnown RBP18.52■□□□□ 0.56
SHANK3-203ENST00000445220 REM1O75628 298 aa18.52■□□□□ 0.55
SHANK3-203ENST00000445220 LIMK2P53671 638 aa18.52■□□□□ 0.55
SHANK3-203ENST00000445220 FAM171A1Q5VUB5 890 aa18.52■□□□□ 0.55
SHANK3-203ENST00000445220 TTC29Q8NA56 475 aaPredicted RBP18.52■□□□□ 0.55
SHANK3-203ENST00000445220 LRRN4Q8WUT4 740 aa18.52■□□□□ 0.55
SHANK3-203ENST00000445220 C18orf25Q96B23 403 aaPredicted RBP18.52■□□□□ 0.55
SHANK3-203ENST00000445220 GATA5Q9BWX5 397 aaPredicted RBP18.52■□□□□ 0.55
SHANK3-203ENST00000445220 MAN2B2Q9Y2E5 1009 aa18.52■□□□□ 0.55
SHANK3-203ENST00000445220 MFHAS1Q9Y4C4 1052 aa18.52■□□□□ 0.55
SHANK3-203ENST00000445220 J3QRK9 145 aa18.52■□□□□ 0.55
SHANK3-203ENST00000445220 SMIM22K7EJ46 135 aa18.52■□□□□ 0.55
SHANK3-203ENST00000445220 AP3D1O14617 1153 aa18.52■□□□□ 0.55
SHANK3-203ENST00000445220 IGSF6O95976 241 aa18.52■□□□□ 0.55
SHANK3-203ENST00000445220 HLA-DQA2P01906 255 aa18.52■□□□□ 0.55
SHANK3-203ENST00000445220 MAGEA8P43361 318 aa18.52■□□□□ 0.55
SHANK3-203ENST00000445220 DLG1Q12959 904 aa18.52■□□□□ 0.55
SHANK3-203ENST00000445220 PTPN20Q4JDL3 420 aa18.52■□□□□ 0.55
SHANK3-203ENST00000445220 COLEC12Q5KU26 742 aa18.52■□□□□ 0.55
SHANK3-203ENST00000445220 ANKS1BQ7Z6G8 1248 aa18.52■□□□□ 0.55
SHANK3-203ENST00000445220 TNFAIP8L1Q8WVP5 186 aa18.52■□□□□ 0.55
SHANK3-203ENST00000445220 IPCEF1Q8WWN9 437 aaPredicted RBP18.52■□□□□ 0.55
SHANK3-203ENST00000445220 FBXL8Q96CD0 374 aa18.52■□□□□ 0.55
SHANK3-203ENST00000445220 ANKRA2Q9H9E1 313 aa18.52■□□□□ 0.55
SHANK3-203ENST00000445220 FKBP14Q9NWM8 211 aa18.52■□□□□ 0.55
SHANK3-203ENST00000445220 TLL2Q9Y6L7 1015 aa18.52■□□□□ 0.55
SHANK3-203ENST00000445220 KIF13AQ9H1H9 1805 aa18.51■□□□□ 0.55
SHANK3-203ENST00000445220 WTIPA6NIX2 430 aaPredicted RBP18.51■□□□□ 0.55
SHANK3-203ENST00000445220 TNFRSF11BO00300 401 aa18.51■□□□□ 0.55
SHANK3-203ENST00000445220 LRATO95237 230 aa18.51■□□□□ 0.55
SHANK3-203ENST00000445220 RAB2AP61019 212 aa18.51■□□□□ 0.55
SHANK3-203ENST00000445220 RGMBQ6NW40 437 aa18.51■□□□□ 0.55
SHANK3-203ENST00000445220 MAF1Q9H063 256 aa18.51■□□□□ 0.55
SHANK3-203ENST00000445220 INTS10Q9NVR2 710 aaKnown RBP18.51■□□□□ 0.55
SHANK3-203ENST00000445220 TMEM9Q9P0T7 183 aa18.51■□□□□ 0.55
SHANK3-203ENST00000445220 ABCG2Q9UNQ0 655 aa18.51■□□□□ 0.55
SHANK3-203ENST00000445220 GIT1Q9Y2X7 761 aa18.51■□□□□ 0.55
SHANK3-203ENST00000445220 AQP12BA6NM10 295 aa18.51■□□□□ 0.55
SHANK3-203ENST00000445220 FAM47E-STBD1D6RA91 191 aa18.51■□□□□ 0.55
SHANK3-203ENST00000445220 ALDH3A2P51648 485 aa18.51■□□□□ 0.55
SHANK3-203ENST00000445220 HSPA14Q0VDF9 509 aa18.51■□□□□ 0.55
SHANK3-203ENST00000445220 SEMA5AQ13591 1074 aa18.51■□□□□ 0.55
SHANK3-203ENST00000445220 AQP12AQ8IXF9 295 aa18.51■□□□□ 0.55
SHANK3-203ENST00000445220 CNPPD1Q9BV87 410 aa18.51■□□□□ 0.55
SHANK3-203ENST00000445220 CDT1Q9H211 546 aa18.51■□□□□ 0.55
SHANK3-203ENST00000445220 ASB8Q9H765 288 aa18.51■□□□□ 0.55
SHANK3-203ENST00000445220 ZDHHC18Q9NUE0 388 aa18.51■□□□□ 0.55
SHANK3-203ENST00000445220 TAS2R7Q9NYW3 318 aa18.51■□□□□ 0.55
SHANK3-203ENST00000445220 MMP8P22894 467 aa18.51■□□□□ 0.55
SHANK3-203ENST00000445220 MNDAP41218 407 aa18.51■□□□□ 0.55
SHANK3-203ENST00000445220 CAPSQ13938 189 aa18.51■□□□□ 0.55
SHANK3-203ENST00000445220 ZDHHC24Q6UX98 284 aa18.51■□□□□ 0.55
SHANK3-203ENST00000445220 CYP4X1Q8N118 509 aa18.51■□□□□ 0.55
SHANK3-203ENST00000445220 CENPSQ8N2Z9 138 aa18.51■□□□□ 0.55
SHANK3-203ENST00000445220 GALNT6Q8NCL4 622 aa18.51■□□□□ 0.55
SHANK3-203ENST00000445220 PTCD2Q8WV60 388 aaKnown RBP18.51■□□□□ 0.55
SHANK3-203ENST00000445220 HDAC10Q969S8 669 aa18.51■□□□□ 0.55
SHANK3-203ENST00000445220 TRNT1Q96Q11 434 aaKnown RBP18.51■□□□□ 0.55
SHANK3-203ENST00000445220 SUCOQ9UBS9 1254 aaKnown RBP18.51■□□□□ 0.55
SHANK3-203ENST00000445220 ZNHIT2Q9UHR6 403 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms