RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 EPHA4P54764 986 aa11.66□□□□□ -0.54
TTC28-203ENST00000442232 DYNLT1P63172 113 aa11.66□□□□□ -0.54
TTC28-203ENST00000442232 SLC10A2Q12908 348 aaPredicted RBP11.66□□□□□ -0.54
TTC28-203ENST00000442232 NFATC2Q13469 925 aa11.66□□□□□ -0.54
TTC28-203ENST00000442232 SQSTM1Q13501 440 aa11.66□□□□□ -0.54
TTC28-203ENST00000442232 KIR2DS5Q14953 304 aa11.66□□□□□ -0.54
TTC28-203ENST00000442232 PCSK7Q16549 785 aa11.66□□□□□ -0.54
TTC28-203ENST00000442232 SKOR2Q2VWA4 1001 aaPredicted RBP11.66□□□□□ -0.54
TTC28-203ENST00000442232 ALS2CLQ60I27 953 aa11.66□□□□□ -0.54
TTC28-203ENST00000442232 PDPK2PQ6A1A2 396 aa11.66□□□□□ -0.54
TTC28-203ENST00000442232 SLC9A4Q6AI14 798 aa11.66□□□□□ -0.54
TTC28-203ENST00000442232 ZNF574Q6ZN55 896 aaPredicted RBP11.66□□□□□ -0.54
TTC28-203ENST00000442232 BZW1Q7L1Q6 419 aaKnown RBP11.66□□□□□ -0.54
TTC28-203ENST00000442232 PRICKLE2Q7Z3G6 844 aa11.66□□□□□ -0.54
TTC28-203ENST00000442232 KDELC2Q7Z4H8 507 aa11.66□□□□□ -0.54
TTC28-203ENST00000442232 NT5DC3Q86UY8 548 aa11.66□□□□□ -0.54
TTC28-203ENST00000442232 ZNF761Q86XN6 746 aaPredicted RBP11.66□□□□□ -0.54
TTC28-203ENST00000442232 TRIM48Q8IWZ4 208 aa11.66□□□□□ -0.54
TTC28-203ENST00000442232 PLD5Q8N7P1 536 aa11.66□□□□□ -0.54
TTC28-203ENST00000442232 SLC35G2Q8TBE7 412 aa11.66□□□□□ -0.54
TTC28-203ENST00000442232 NCSTNQ92542 709 aa11.66□□□□□ -0.54
TTC28-203ENST00000442232 EXTL1Q92935 676 aa11.66□□□□□ -0.54
TTC28-203ENST00000442232 AGAP3Q96P47 875 aa11.66□□□□□ -0.54
TTC28-203ENST00000442232 TEFMQ96QE5 360 aaKnown RBP11.66□□□□□ -0.54
TTC28-203ENST00000442232 SRPK1Q96SB4 655 aaKnown RBP11.66□□□□□ -0.54
TTC28-203ENST00000442232 DDA1Q9BW61 102 aa11.66□□□□□ -0.54
TTC28-203ENST00000442232 SEMA4CQ9C0C4 833 aa11.66□□□□□ -0.54
TTC28-203ENST00000442232 CARD9Q9H257 536 aa11.66□□□□□ -0.54
TTC28-203ENST00000442232 EPB41L1Q9H4G0 881 aa11.66□□□□□ -0.54
TTC28-203ENST00000442232 SARS2Q9NP81 518 aaKnown RBP11.66□□□□□ -0.54
TTC28-203ENST00000442232 ABHD10Q9NUJ1 306 aa11.66□□□□□ -0.54
TTC28-203ENST00000442232 PCDHGA3Q9Y5H0 932 aa11.66□□□□□ -0.54
TTC28-203ENST00000442232 ST14Q9Y5Y6 855 aa11.66□□□□□ -0.54
TTC28-203ENST00000442232 OAS3Q9Y6K5 1087 aaKnown RBP11.66□□□□□ -0.54
TTC28-203ENST00000442232 FADS2P1A8MWK0 482 aa11.65□□□□□ -0.54
TTC28-203ENST00000442232 B4E171 279 aa11.65□□□□□ -0.54
TTC28-203ENST00000442232 GPR89AB7ZAQ6 455 aa11.65□□□□□ -0.54
TTC28-203ENST00000442232 SPOPO43791 374 aa11.65□□□□□ -0.54
TTC28-203ENST00000442232 SLC28A2O43868 658 aa11.65□□□□□ -0.54
TTC28-203ENST00000442232 NUAK1O60285 661 aa11.65□□□□□ -0.54
TTC28-203ENST00000442232 SLC25A14O95258 325 aaPredicted RBP11.65□□□□□ -0.54
TTC28-203ENST00000442232 MMP2P08253 660 aa11.65□□□□□ -0.54
TTC28-203ENST00000442232 GPR89BP0CG08 455 aa11.65□□□□□ -0.54
TTC28-203ENST00000442232 FGF3P11487 239 aaPredicted RBP11.65□□□□□ -0.54
TTC28-203ENST00000442232 F3P13726 295 aa11.65□□□□□ -0.54
TTC28-203ENST00000442232 TSPAN7P41732 249 aa11.65□□□□□ -0.54
TTC28-203ENST00000442232 SLC1A1P43005 524 aa11.65□□□□□ -0.54
TTC28-203ENST00000442232 DCDC1P59894 354 aa11.65□□□□□ -0.54
TTC28-203ENST00000442232 CDK18Q07002 472 aa11.65□□□□□ -0.54
TTC28-203ENST00000442232 SLC14A2Q15849 920 aa11.65□□□□□ -0.54
TTC28-203ENST00000442232 INSCQ1MX18 579 aa11.65□□□□□ -0.54
TTC28-203ENST00000442232 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.65□□□□□ -0.54
TTC28-203ENST00000442232 LRRC38Q5VT99 294 aa11.65□□□□□ -0.54
TTC28-203ENST00000442232 WDR74Q6RFH5 385 aaPredicted RBP11.65□□□□□ -0.54
TTC28-203ENST00000442232 DTX1Q86Y01 620 aa11.65□□□□□ -0.54
TTC28-203ENST00000442232 RHOT1Q8IXI2 618 aa11.65□□□□□ -0.54
TTC28-203ENST00000442232 TRAM1L1Q8N609 369 aa11.65□□□□□ -0.54
TTC28-203ENST00000442232 JPH3Q8WXH2 748 aaPredicted RBP11.65□□□□□ -0.54
TTC28-203ENST00000442232 KIAA1143Q96AT1 154 aaPredicted RBP11.65□□□□□ -0.54
TTC28-203ENST00000442232 IMP4Q96G21 291 aaKnown RBP11.65□□□□□ -0.54
TTC28-203ENST00000442232 CEP41Q9BYV8 373 aa11.65□□□□□ -0.54
TTC28-203ENST00000442232 SLC25A51Q9H1U9 297 aa11.65□□□□□ -0.54
TTC28-203ENST00000442232 OR2AG1Q9H205 316 aa11.65□□□□□ -0.54
TTC28-203ENST00000442232 NHEJ1Q9H9Q4 299 aaPredicted RBP11.65□□□□□ -0.54
TTC28-203ENST00000442232 SPTLC3Q9NUV7 552 aa11.65□□□□□ -0.54
TTC28-203ENST00000442232 TMEM9Q9P0T7 183 aa11.65□□□□□ -0.54
TTC28-203ENST00000442232 TBC1D29Q9UFV1 150 aa11.65□□□□□ -0.54
TTC28-203ENST00000442232 SHOC2Q9UQ13 582 aa11.65□□□□□ -0.54
TTC28-203ENST00000442232 ZNF711Q9Y462 761 aa11.65□□□□□ -0.54
TTC28-203ENST00000442232 A0A0A6YYK5 440 aaPredicted RBP11.64□□□□□ -0.55
TTC28-203ENST00000442232 A8MU76 341 aa11.64□□□□□ -0.55
TTC28-203ENST00000442232 MFAP3LO75121 409 aa11.64□□□□□ -0.55
TTC28-203ENST00000442232 ZIC2O95409 532 aaPredicted RBP11.64□□□□□ -0.55
TTC28-203ENST00000442232 PIRTP0C851 137 aa11.64□□□□□ -0.55
TTC28-203ENST00000442232 VCLP18206 1134 aa11.64□□□□□ -0.55
TTC28-203ENST00000442232 NR2C2P49116 596 aa11.64□□□□□ -0.55
TTC28-203ENST00000442232 NFATC3Q12968 1075 aa11.64□□□□□ -0.55
TTC28-203ENST00000442232 SRSF6Q13247 344 aaKnown RBP11.64□□□□□ -0.55
TTC28-203ENST00000442232 GTF2H3Q13889 308 aa11.64□□□□□ -0.55
TTC28-203ENST00000442232 TFDP2Q14188 446 aa11.64□□□□□ -0.55
TTC28-203ENST00000442232 IHHQ14623 411 aa11.64□□□□□ -0.55
TTC28-203ENST00000442232 ASTE1Q2TB18 679 aaPredicted RBP11.64□□□□□ -0.55
TTC28-203ENST00000442232 PLA2G4EQ3MJ16 856 aa11.64□□□□□ -0.55
TTC28-203ENST00000442232 IYDQ6PHW0 289 aa11.64□□□□□ -0.55
TTC28-203ENST00000442232 NPNTQ6UXI9 565 aa11.64□□□□□ -0.55
TTC28-203ENST00000442232 CEACAM20Q6UY09 585 aa11.64□□□□□ -0.55
TTC28-203ENST00000442232 LRRTM4Q86VH4 590 aa11.64□□□□□ -0.55
TTC28-203ENST00000442232 PLXDC1Q8IUK5 500 aa11.64□□□□□ -0.55
TTC28-203ENST00000442232 CNGA4Q8IV77 575 aa11.64□□□□□ -0.55
TTC28-203ENST00000442232 VSTM4Q8IW00 320 aa11.64□□□□□ -0.55
TTC28-203ENST00000442232 CACNA2D3Q8IZS8 1091 aa11.64□□□□□ -0.55
TTC28-203ENST00000442232 GLYATL1Q969I3 302 aa11.64□□□□□ -0.55
TTC28-203ENST00000442232 RNF25Q96BH1 459 aaPredicted RBP11.64□□□□□ -0.55
TTC28-203ENST00000442232 WDR24Q96S15 920 aa11.64□□□□□ -0.55
TTC28-203ENST00000442232 ZPBPQ9BS86 351 aa11.64□□□□□ -0.55
TTC28-203ENST00000442232 EFHD1Q9BUP0 239 aa11.64□□□□□ -0.55
TTC28-203ENST00000442232 TSPY26PQ9H489 355 aa11.64□□□□□ -0.55
TTC28-203ENST00000442232 MAGEE1Q9HCI5 957 aa11.64□□□□□ -0.55
TTC28-203ENST00000442232 KLC4Q9NSK0 619 aa11.64□□□□□ -0.55
TTC28-203ENST00000442232 ATXN10Q9UBB4 475 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms