RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 GRID2O43424 1007 aa24.48■■□□□ 1.51
RAPGEF1-206ENST00000438647 STIP1P31948 543 aaKnown RBP24.48■■□□□ 1.51
RAPGEF1-206ENST00000438647 CHST15Q7LFX5 561 aaPredicted RBP24.48■■□□□ 1.51
RAPGEF1-206ENST00000438647 C17orf82Q86X59 251 aaPredicted RBP24.48■■□□□ 1.51
RAPGEF1-206ENST00000438647 CCNJLQ8IV13 435 aa24.48■■□□□ 1.51
RAPGEF1-206ENST00000438647 GFM1Q96RP9 751 aaKnown RBP24.48■■□□□ 1.51
RAPGEF1-206ENST00000438647 TBL1YQ9BQ87 522 aa24.48■■□□□ 1.51
RAPGEF1-206ENST00000438647 OR2AG1Q9H205 316 aa24.48■■□□□ 1.51
RAPGEF1-206ENST00000438647 ATXN10Q9UBB4 475 aa24.48■■□□□ 1.51
RAPGEF1-206ENST00000438647 RABGEF1Q9UJ41 708 aa24.48■■□□□ 1.51
RAPGEF1-206ENST00000438647 PPP2R2CQ9Y2T4 447 aa24.48■■□□□ 1.51
RAPGEF1-206ENST00000438647 PCDHB1Q9Y5F3 818 aa24.48■■□□□ 1.51
RAPGEF1-206ENST00000438647 RNF215Q9Y6U7 377 aa24.48■■□□□ 1.51
RAPGEF1-206ENST00000438647 STX7O15400 261 aaKnown RBP24.47■■□□□ 1.51
RAPGEF1-206ENST00000438647 VEGFDO43915 354 aa24.47■■□□□ 1.51
RAPGEF1-206ENST00000438647 ECEL1O95672 775 aa24.47■■□□□ 1.51
RAPGEF1-206ENST00000438647 PDE1BQ01064 536 aa24.47■■□□□ 1.51
RAPGEF1-206ENST00000438647 TAF1AQ15573 450 aaPredicted RBP24.47■■□□□ 1.51
RAPGEF1-206ENST00000438647 KLHDC8BQ8IXV7 354 aa24.47■■□□□ 1.51
RAPGEF1-206ENST00000438647 APOL2Q9BQE5 337 aa24.47■■□□□ 1.51
RAPGEF1-206ENST00000438647 IL26Q9NPH9 171 aa24.47■■□□□ 1.51
RAPGEF1-206ENST00000438647 PLEKHM1Q9Y4G2 1056 aa24.47■■□□□ 1.51
RAPGEF1-206ENST00000438647 GLYATL1P3A0A0U1RQE8 302 aa24.46■■□□□ 1.51
RAPGEF1-206ENST00000438647 SRRM3A6NNA2 597 aaPredicted RBP24.46■■□□□ 1.51
RAPGEF1-206ENST00000438647 RHPN2P1A8MT19 583 aa24.46■■□□□ 1.51
RAPGEF1-206ENST00000438647 USP12O75317 370 aa24.46■■□□□ 1.51
RAPGEF1-206ENST00000438647 RPLP0P05388 317 aaKnown RBP24.46■■□□□ 1.51
RAPGEF1-206ENST00000438647 ZNF8P17098 575 aaPredicted RBP24.46■■□□□ 1.51
RAPGEF1-206ENST00000438647 LPOP22079 712 aaPredicted RBP24.46■■□□□ 1.51
RAPGEF1-206ENST00000438647 MAZP56270 477 aaKnown RBP24.46■■□□□ 1.51
RAPGEF1-206ENST00000438647 ITGA9Q13797 1035 aa24.46■■□□□ 1.51
RAPGEF1-206ENST00000438647 ATP13A5Q4VNC0 1218 aa24.46■■□□□ 1.51
RAPGEF1-206ENST00000438647 SFTPA2Q8IWL1 248 aa24.46■■□□□ 1.51
RAPGEF1-206ENST00000438647 NAGSQ8N159 534 aa24.46■■□□□ 1.51
RAPGEF1-206ENST00000438647 ARL14Q8N4G2 192 aa24.46■■□□□ 1.51
RAPGEF1-206ENST00000438647 BRSK1Q8TDC3 778 aa24.46■■□□□ 1.51
RAPGEF1-206ENST00000438647 ATG4AQ8WYN0 398 aa24.46■■□□□ 1.51
RAPGEF1-206ENST00000438647 RTP4Q96DX8 246 aa24.46■■□□□ 1.51
RAPGEF1-206ENST00000438647 LRRN3Q9H3W5 708 aa24.46■■□□□ 1.51
RAPGEF1-206ENST00000438647 LRRC40Q9H9A6 602 aa24.46■■□□□ 1.51
RAPGEF1-206ENST00000438647 ARFGAP3Q9NP61 516 aa24.46■■□□□ 1.51
RAPGEF1-206ENST00000438647 PRKAB1Q9Y478 270 aa24.46■■□□□ 1.51
RAPGEF1-206ENST00000438647 ACACAQ13085 2346 aa24.46■■□□□ 1.51
RAPGEF1-206ENST00000438647 SCN8AQ9UQD0 1980 aa24.45■■□□□ 1.51
RAPGEF1-206ENST00000438647 TMX2-CTNND1H3BSU7 103 aa24.45■■□□□ 1.5
RAPGEF1-206ENST00000438647 TAF4O00268 1085 aa24.45■■□□□ 1.5
RAPGEF1-206ENST00000438647 PSMD3O43242 534 aa24.45■■□□□ 1.5
RAPGEF1-206ENST00000438647 LIASO43766 372 aa24.45■■□□□ 1.5
RAPGEF1-206ENST00000438647 CRTAMO95727 393 aa24.45■■□□□ 1.5
RAPGEF1-206ENST00000438647 ACP5P13686 325 aa24.45■■□□□ 1.5
RAPGEF1-206ENST00000438647 ACTN2P35609 894 aa24.45■■□□□ 1.5
RAPGEF1-206ENST00000438647 GDF10P55107 478 aa24.45■■□□□ 1.5
RAPGEF1-206ENST00000438647 CCL7P80098 99 aa24.45■■□□□ 1.5
RAPGEF1-206ENST00000438647 SPRED1Q7Z699 444 aa24.45■■□□□ 1.5
RAPGEF1-206ENST00000438647 ADGRG6Q86SQ4 1221 aa24.45■■□□□ 1.5
RAPGEF1-206ENST00000438647 LSMEM2Q8N112 164 aa24.45■■□□□ 1.5
RAPGEF1-206ENST00000438647 Q8N9G6 341 aaPredicted RBP24.45■■□□□ 1.5
RAPGEF1-206ENST00000438647 GDAP1Q8TB36 358 aa24.45■■□□□ 1.5
RAPGEF1-206ENST00000438647 ZCCHC2Q9C0B9 1178 aaKnown RBP24.45■■□□□ 1.5
RAPGEF1-206ENST00000438647 ARNT2Q9HBZ2 717 aa24.45■■□□□ 1.5
RAPGEF1-206ENST00000438647 PCYT1BQ9Y5K3 369 aaPredicted RBP24.45■■□□□ 1.5
RAPGEF1-206ENST00000438647 APC2O95996 2303 aa24.44■■□□□ 1.5
RAPGEF1-206ENST00000438647 D6RAR5 112 aa24.44■■□□□ 1.5
RAPGEF1-206ENST00000438647 CHUKO15111 745 aa24.44■■□□□ 1.5
RAPGEF1-206ENST00000438647 CDK14O94921 469 aa24.44■■□□□ 1.5
RAPGEF1-206ENST00000438647 SLC2A4P14672 509 aa24.44■■□□□ 1.5
RAPGEF1-206ENST00000438647 OLIG2Q13516 323 aa24.44■■□□□ 1.5
RAPGEF1-206ENST00000438647 GTF2H3Q13889 308 aa24.44■■□□□ 1.5
RAPGEF1-206ENST00000438647 OASLQ15646 514 aaKnown RBP24.44■■□□□ 1.5
RAPGEF1-206ENST00000438647 FAM151BQ6UXP7 276 aa24.44■■□□□ 1.5
RAPGEF1-206ENST00000438647 ZNF438Q7Z4V0 828 aa24.44■■□□□ 1.5
RAPGEF1-206ENST00000438647 LRRTM4Q86VH4 590 aa24.44■■□□□ 1.5
RAPGEF1-206ENST00000438647 MAIP1Q8WWC4 291 aa24.44■■□□□ 1.5
RAPGEF1-206ENST00000438647 ANP32BQ92688 251 aaKnown RBP24.44■■□□□ 1.5
RAPGEF1-206ENST00000438647 TTC25Q96NG3 672 aa24.44■■□□□ 1.5
RAPGEF1-206ENST00000438647 C19orf43Q9BQ61 176 aa24.44■■□□□ 1.5
RAPGEF1-206ENST00000438647 ZNF148Q9UQR1 794 aa24.44■■□□□ 1.5
RAPGEF1-206ENST00000438647 ENTPD2Q9Y5L3 495 aa24.44■■□□□ 1.5
RAPGEF1-206ENST00000438647 ARL5AQ9Y689 179 aa24.44■■□□□ 1.5
RAPGEF1-206ENST00000438647 KMT2BQ9UMN6 2715 aaPredicted RBP24.44■■□□□ 1.5
RAPGEF1-206ENST00000438647 A0A1W2PQM1 296 aa24.43■■□□□ 1.5
RAPGEF1-206ENST00000438647 KMOO15229 486 aa24.43■■□□□ 1.5
RAPGEF1-206ENST00000438647 BUD23O43709 281 aaKnown RBP24.43■■□□□ 1.5
RAPGEF1-206ENST00000438647 METTL18O95568 372 aa24.43■■□□□ 1.5
RAPGEF1-206ENST00000438647 GPR3P46089 330 aa24.43■■□□□ 1.5
RAPGEF1-206ENST00000438647 NR1D2Q14995 579 aa24.43■■□□□ 1.5
RAPGEF1-206ENST00000438647 CHRNA6Q15825 494 aa24.43■■□□□ 1.5
RAPGEF1-206ENST00000438647 LDLRAP1Q5SW96 308 aa24.43■■□□□ 1.5
RAPGEF1-206ENST00000438647 ZNF648Q5T619 568 aaPredicted RBP24.43■■□□□ 1.5
RAPGEF1-206ENST00000438647 KCTD11Q693B1 232 aa24.43■■□□□ 1.5
RAPGEF1-206ENST00000438647 OR4K2Q8NGD2 314 aa24.43■■□□□ 1.5
RAPGEF1-206ENST00000438647 PATE1Q8WXA2 126 aa24.43■■□□□ 1.5
RAPGEF1-206ENST00000438647 ATXN7L3BQ96GX2 97 aa24.43■■□□□ 1.5
RAPGEF1-206ENST00000438647 TMEM74Q96NL1 305 aa24.43■■□□□ 1.5
RAPGEF1-206ENST00000438647 STN1Q9H668 368 aaKnown RBP24.43■■□□□ 1.5
RAPGEF1-206ENST00000438647 POLR1BQ9H9Y6 1135 aa24.43■■□□□ 1.5
RAPGEF1-206ENST00000438647 KCNK6Q9Y257 313 aa24.43■■□□□ 1.5
RAPGEF1-206ENST00000438647 ZKSCAN5Q9Y2L8 839 aa24.43■■□□□ 1.5
RAPGEF1-206ENST00000438647 BRINP1O60477 761 aa24.42■■□□□ 1.5
RAPGEF1-206ENST00000438647 MTX2O75431 263 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms