RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 UNC13CQ8NB66 2214 aa16.09■□□□□ 0.17
SMPD4-207ENST00000435455 TRABD2BA6NFA1 517 aa16.09■□□□□ 0.17
SMPD4-207ENST00000435455 VEGFDO43915 354 aa16.09■□□□□ 0.17
SMPD4-207ENST00000435455 CEP104O60308 925 aa16.09■□□□□ 0.17
SMPD4-207ENST00000435455 TCEA3O75764 348 aa16.09■□□□□ 0.17
SMPD4-207ENST00000435455 METTL18O95568 372 aa16.09■□□□□ 0.17
SMPD4-207ENST00000435455 CRTAMO95727 393 aa16.09■□□□□ 0.17
SMPD4-207ENST00000435455 FGGP02679 453 aa16.09■□□□□ 0.17
SMPD4-207ENST00000435455 OLIG2Q13516 323 aa16.09■□□□□ 0.17
SMPD4-207ENST00000435455 HLTFQ14527 1009 aaKnown RBP eCLIP16.09■□□□□ 0.17
SMPD4-207ENST00000435455 CCNG2Q16589 344 aa16.09■□□□□ 0.17
SMPD4-207ENST00000435455 ST3GAL2Q16842 350 aa16.09■□□□□ 0.17
SMPD4-207ENST00000435455 KCTD11Q693B1 232 aa16.09■□□□□ 0.17
SMPD4-207ENST00000435455 DENND5AQ6IQ26 1287 aa16.09■□□□□ 0.17
SMPD4-207ENST00000435455 ZCCHC14Q8WYQ9 949 aaKnown RBP16.09■□□□□ 0.17
SMPD4-207ENST00000435455 C19orf43Q9BQ61 176 aa16.09■□□□□ 0.17
SMPD4-207ENST00000435455 CCDC86Q9H6F5 360 aaKnown RBP16.09■□□□□ 0.17
SMPD4-207ENST00000435455 ATXN10Q9UBB4 475 aa16.09■□□□□ 0.17
SMPD4-207ENST00000435455 APPL1Q9UKG1 709 aa16.09■□□□□ 0.17
SMPD4-207ENST00000435455 JRKLQ9Y4A0 524 aa16.09■□□□□ 0.17
SMPD4-207ENST00000435455 ST14Q9Y5Y6 855 aa16.09■□□□□ 0.17
SMPD4-207ENST00000435455 APC2O95996 2303 aa16.08■□□□□ 0.17
SMPD4-207ENST00000435455 CACNA1BQ00975 2339 aa16.08■□□□□ 0.17
SMPD4-207ENST00000435455 BPTFQ12830 3046 aa16.08■□□□□ 0.17
SMPD4-207ENST00000435455 DMXL2Q8TDJ6 3036 aa16.08■□□□□ 0.17
SMPD4-207ENST00000435455 GLYATL1P3A0A0U1RQE8 302 aa16.08■□□□□ 0.16
SMPD4-207ENST00000435455 ERI2A8K979 691 aaKnown RBP16.08■□□□□ 0.16
SMPD4-207ENST00000435455 GRID2O43424 1007 aa16.08■□□□□ 0.16
SMPD4-207ENST00000435455 BUD23O43709 281 aaKnown RBP16.08■□□□□ 0.16
SMPD4-207ENST00000435455 NUDT21O43809 227 aaKnown RBP16.08■□□□□ 0.16
SMPD4-207ENST00000435455 USP12O75317 370 aa16.08■□□□□ 0.16
SMPD4-207ENST00000435455 AP2A1O95782 977 aa16.08■□□□□ 0.16
SMPD4-207ENST00000435455 IFNB1P01574 187 aa16.08■□□□□ 0.16
SMPD4-207ENST00000435455 PNLIPP16233 465 aa16.08■□□□□ 0.16
SMPD4-207ENST00000435455 ZNF8P17098 575 aaPredicted RBP16.08■□□□□ 0.16
SMPD4-207ENST00000435455 MSNP26038 577 aaKnown RBP16.08■□□□□ 0.16
SMPD4-207ENST00000435455 FDFT1P37268 417 aa16.08■□□□□ 0.16
SMPD4-207ENST00000435455 SNX1Q13596 522 aa16.08■□□□□ 0.16
SMPD4-207ENST00000435455 ITGA9Q13797 1035 aa16.08■□□□□ 0.16
SMPD4-207ENST00000435455 SPARCL1Q14515 664 aa16.08■□□□□ 0.16
SMPD4-207ENST00000435455 SIX1Q15475 284 aaPredicted RBP16.08■□□□□ 0.16
SMPD4-207ENST00000435455 CHRNA6Q15825 494 aa16.08■□□□□ 0.16
SMPD4-207ENST00000435455 ATP13A5Q4VNC0 1218 aa16.08■□□□□ 0.16
SMPD4-207ENST00000435455 DRICH1Q6PGQ1 229 aaPredicted RBP16.08■□□□□ 0.16
SMPD4-207ENST00000435455 FAM151BQ6UXP7 276 aa16.08■□□□□ 0.16
SMPD4-207ENST00000435455 RBM44Q6ZP01 1051 aaKnown RBP16.08■□□□□ 0.16
SMPD4-207ENST00000435455 CHST15Q7LFX5 561 aaPredicted RBP16.08■□□□□ 0.16
SMPD4-207ENST00000435455 ADGRG6Q86SQ4 1221 aa16.08■□□□□ 0.16
SMPD4-207ENST00000435455 LINC00523Q86TU6 105 aa16.08■□□□□ 0.16
SMPD4-207ENST00000435455 C17orf82Q86X59 251 aaPredicted RBP16.08■□□□□ 0.16
SMPD4-207ENST00000435455 REXO1L1PQ8IX06 675 aa16.08■□□□□ 0.16
SMPD4-207ENST00000435455 GDAP1Q8TB36 358 aa16.08■□□□□ 0.16
SMPD4-207ENST00000435455 GRAMD1AQ96CP6 724 aa16.08■□□□□ 0.16
SMPD4-207ENST00000435455 NXPE2Q96DL1 559 aa16.08■□□□□ 0.16
SMPD4-207ENST00000435455 PDLIM2Q96JY6 352 aa16.08■□□□□ 0.16
SMPD4-207ENST00000435455 ZCCHC2Q9C0B9 1178 aaKnown RBP16.08■□□□□ 0.16
SMPD4-207ENST00000435455 NRSN2Q9GZP1 204 aa16.08■□□□□ 0.16
SMPD4-207ENST00000435455 KCNF1Q9H3M0 494 aa16.08■□□□□ 0.16
SMPD4-207ENST00000435455 ARFGAP3Q9NP61 516 aa16.08■□□□□ 0.16
SMPD4-207ENST00000435455 HOMER3Q9NSC5 361 aa16.08■□□□□ 0.16
SMPD4-207ENST00000435455 LRIT1Q9P2V4 623 aa16.08■□□□□ 0.16
SMPD4-207ENST00000435455 DKK4Q9UBT3 224 aa16.08■□□□□ 0.16
SMPD4-207ENST00000435455 DRG1Q9Y295 367 aaKnown RBP16.08■□□□□ 0.16
SMPD4-207ENST00000435455 PRKAB1Q9Y478 270 aa16.08■□□□□ 0.16
SMPD4-207ENST00000435455 PLEKHM1Q9Y4G2 1056 aa16.08■□□□□ 0.16
SMPD4-207ENST00000435455 ARL5AQ9Y689 179 aa16.08■□□□□ 0.16
SMPD4-207ENST00000435455 KMT2BQ9UMN6 2715 aaPredicted RBP16.07■□□□□ 0.16
SMPD4-207ENST00000435455 CHUKO15111 745 aa16.07■□□□□ 0.16
SMPD4-207ENST00000435455 KMOO15229 486 aa16.07■□□□□ 0.16
SMPD4-207ENST00000435455 ZW10O43264 779 aa16.07■□□□□ 0.16
SMPD4-207ENST00000435455 CDK14O94921 469 aa16.07■□□□□ 0.16
SMPD4-207ENST00000435455 SPIDRQ14159 915 aa16.07■□□□□ 0.16
SMPD4-207ENST00000435455 LONRF2Q1L5Z9 754 aa16.07■□□□□ 0.16
SMPD4-207ENST00000435455 LDLRAP1Q5SW96 308 aa16.07■□□□□ 0.16
SMPD4-207ENST00000435455 CCDC89Q8N998 374 aa16.07■□□□□ 0.16
SMPD4-207ENST00000435455 OR4K2Q8NGD2 314 aa16.07■□□□□ 0.16
SMPD4-207ENST00000435455 TTC25Q96NG3 672 aa16.07■□□□□ 0.16
SMPD4-207ENST00000435455 RABGEF1Q9UJ41 708 aa16.07■□□□□ 0.16
SMPD4-207ENST00000435455 TMPRSS11EQ9UL52 423 aa16.07■□□□□ 0.16
SMPD4-207ENST00000435455 RNF215Q9Y6U7 377 aa16.07■□□□□ 0.16
SMPD4-207ENST00000435455 COL27A1Q8IZC6 1860 aaPredicted RBP16.07■□□□□ 0.16
SMPD4-207ENST00000435455 RHPN2P1A8MT19 583 aa16.06■□□□□ 0.16
SMPD4-207ENST00000435455 NTN3O00634 580 aaPredicted RBP16.06■□□□□ 0.16
SMPD4-207ENST00000435455 GAPDHSO14556 408 aaPredicted RBP16.06■□□□□ 0.16
SMPD4-207ENST00000435455 CSO75390 466 aaKnown RBP16.06■□□□□ 0.16
SMPD4-207ENST00000435455 ECEL1O95672 775 aa16.06■□□□□ 0.16
SMPD4-207ENST00000435455 CAPNS1P04632 268 aa16.06■□□□□ 0.16
SMPD4-207ENST00000435455 ACP5P13686 325 aa16.06■□□□□ 0.16
SMPD4-207ENST00000435455 SLC2A4P14672 509 aa16.06■□□□□ 0.16
SMPD4-207ENST00000435455 CXCR5P32302 372 aa16.06■□□□□ 0.16
SMPD4-207ENST00000435455 HADHAP40939 763 aa16.06■□□□□ 0.16
SMPD4-207ENST00000435455 CLCNKAP51800 687 aa16.06■□□□□ 0.16
SMPD4-207ENST00000435455 ZNF140P52738 457 aaPredicted RBP16.06■□□□□ 0.16
SMPD4-207ENST00000435455 MAZP56270 477 aaKnown RBP16.06■□□□□ 0.16
SMPD4-207ENST00000435455 MSLNQ13421 630 aaPredicted RBP16.06■□□□□ 0.16
SMPD4-207ENST00000435455 BIRC2Q13490 618 aa16.06■□□□□ 0.16
SMPD4-207ENST00000435455 GTF2H3Q13889 308 aa16.06■□□□□ 0.16
SMPD4-207ENST00000435455 RTP5Q14D33 572 aa16.06■□□□□ 0.16
SMPD4-207ENST00000435455 ZNF648Q5T619 568 aaPredicted RBP16.06■□□□□ 0.16
SMPD4-207ENST00000435455 C4orf22Q6V702 233 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms