RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 JAMLQ86YT9 394 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 PPIL6Q8IXY8 311 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 SLC25A45Q8N413 288 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 ZNF398Q8TD17 642 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 STYXQ8WUJ0 223 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 GLMNQ92990 594 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 COX14Q96I36 57 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 OR2M4Q96R27 311 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 DUSP23Q9BVJ7 150 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 GSDMCQ9BYG8 508 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 TRIM31Q9BZY9 425 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 TMEM168Q9H0V1 697 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 UGT1A7Q9HAW7 530 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 UGT1A10Q9HAW8 530 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 UGT1A8Q9HAW9 530 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 SIRPGQ9P1W8 387 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 VPS18Q9P253 973 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 SLC17A4Q9Y2C5 497 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 PRKAB1Q9Y478 270 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 OAS3Q9Y6K5 1087 aaKnown RBP15.38■□□□□ 0.05
TREX1-201ENST00000433541 ARHGEF17Q96PE2 2063 aaPredicted RBP15.38■□□□□ 0.05
TREX1-201ENST00000433541 ARID1BQ8NFD5 2236 aaPredicted RBP15.37■□□□□ 0.05
TREX1-201ENST00000433541 TCRBV7S3A2A0A539 114 aa15.37■□□□□ 0.05
TREX1-201ENST00000433541 TTI1O43156 1089 aa15.37■□□□□ 0.05
TREX1-201ENST00000433541 SIGLEC6O43699 453 aa15.37■□□□□ 0.05
TREX1-201ENST00000433541 CDK14O94921 469 aa15.37■□□□□ 0.05
TREX1-201ENST00000433541 TUBB4AP04350 444 aa15.37■□□□□ 0.05
TREX1-201ENST00000433541 IVLP07476 585 aa15.37■□□□□ 0.05
TREX1-201ENST00000433541 CELA2BP08218 269 aaPredicted RBP15.37■□□□□ 0.05
TREX1-201ENST00000433541 MSH3P20585 1137 aa15.37■□□□□ 0.05
TREX1-201ENST00000433541 MGAT1P26572 445 aa15.37■□□□□ 0.05
TREX1-201ENST00000433541 NPY2RP49146 381 aa15.37■□□□□ 0.05
TREX1-201ENST00000433541 PRAMEP78395 509 aa15.37■□□□□ 0.05
TREX1-201ENST00000433541 BIRC2Q13490 618 aa15.37■□□□□ 0.05
TREX1-201ENST00000433541 DHX34Q14147 1143 aaKnown RBP15.37■□□□□ 0.05
TREX1-201ENST00000433541 PLA2G4EQ3MJ16 856 aa15.37■□□□□ 0.05
TREX1-201ENST00000433541 LDLRAP1Q5SW96 308 aa15.37■□□□□ 0.05
TREX1-201ENST00000433541 ANKRD22Q5VYY1 191 aa15.37■□□□□ 0.05
TREX1-201ENST00000433541 IZUMO3Q5VZ72 239 aa15.37■□□□□ 0.05
TREX1-201ENST00000433541 SLC30A9Q6PML9 568 aa15.37■□□□□ 0.05
TREX1-201ENST00000433541 PCGF5Q86SE9 256 aa15.37■□□□□ 0.05
TREX1-201ENST00000433541 OTUD6BQ8N6M0 293 aa15.37■□□□□ 0.05
TREX1-201ENST00000433541 SPATA4Q8NEY3 305 aa15.37■□□□□ 0.05
TREX1-201ENST00000433541 OR4C6Q8NH72 309 aa15.37■□□□□ 0.05
TREX1-201ENST00000433541 KIF18AQ8NI77 898 aa15.37■□□□□ 0.05
TREX1-201ENST00000433541 CPT1BQ92523 772 aa15.37■□□□□ 0.05
TREX1-201ENST00000433541 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.37■□□□□ 0.052e-7■■■■■ 62.8
TREX1-201ENST00000433541 ULK4Q96C45 1275 aa15.37■□□□□ 0.05
TREX1-201ENST00000433541 DCUN1D1Q96GG9 259 aa15.37■□□□□ 0.05
TREX1-201ENST00000433541 TBATAQ96M53 351 aa15.37■□□□□ 0.05
TREX1-201ENST00000433541 VPS35Q96QK1 796 aa15.37■□□□□ 0.05
TREX1-201ENST00000433541 TRIM51Q9BSJ1 452 aa15.37■□□□□ 0.05
TREX1-201ENST00000433541 IL22Q9GZX6 179 aa15.37■□□□□ 0.05
TREX1-201ENST00000433541 DPEP2Q9H4A9 486 aa15.37■□□□□ 0.05
TREX1-201ENST00000433541 FAM96AQ9H5X1 160 aa15.37■□□□□ 0.05
TREX1-201ENST00000433541 TRIM39Q9HCM9 518 aa15.37■□□□□ 0.05
TREX1-201ENST00000433541 NLE1Q9NVX2 485 aaPredicted RBP15.37■□□□□ 0.05
TREX1-201ENST00000433541 ATXN10Q9UBB4 475 aa15.37■□□□□ 0.05
TREX1-201ENST00000433541 GULP1Q9UBP9 304 aa15.37■□□□□ 0.05
TREX1-201ENST00000433541 CNOT6Q9ULM6 557 aaKnown RBP15.37■□□□□ 0.05
TREX1-201ENST00000433541 CSNK1G3Q9Y6M4 447 aa15.37■□□□□ 0.05
TREX1-201ENST00000433541 COL5A1P20908 1838 aaPredicted RBP15.37■□□□□ 0.05
TREX1-201ENST00000433541 B4DGG1 531 aa15.36■□□□□ 0.05
TREX1-201ENST00000433541 LMO7DNF2Z398 122 aa15.36■□□□□ 0.05
TREX1-201ENST00000433541 TM4SF5O14894 197 aa15.36■□□□□ 0.05
TREX1-201ENST00000433541 RALBP11234 206 aa15.36■□□□□ 0.05
TREX1-201ENST00000433541 ACP5P13686 325 aa15.36■□□□□ 0.05
TREX1-201ENST00000433541 NFATC2Q13469 925 aa15.36■□□□□ 0.05
TREX1-201ENST00000433541 INSCQ1MX18 579 aa15.36■□□□□ 0.05
TREX1-201ENST00000433541 PCID2Q5JVF3 399 aa15.36■□□□□ 0.05
TREX1-201ENST00000433541 TSTD2Q5T7W7 516 aa15.36■□□□□ 0.05
TREX1-201ENST00000433541 ZCCHC8Q6NZY4 707 aaKnown RBP15.36■□□□□ 0.05
TREX1-201ENST00000433541 LRRC8BQ6P9F7 803 aa15.36■□□□□ 0.05
TREX1-201ENST00000433541 DBX2Q6ZNG2 339 aa15.36■□□□□ 0.05
TREX1-201ENST00000433541 NLRP9Q7RTR0 991 aa15.36■□□□□ 0.05
TREX1-201ENST00000433541 KANSL1Q7Z3B3 1105 aa15.36■□□□□ 0.05
TREX1-201ENST00000433541 TRAPPC5Q8IUR0 188 aa15.36■□□□□ 0.05
TREX1-201ENST00000433541 FAM46DQ8NEK8 389 aa15.36■□□□□ 0.05
TREX1-201ENST00000433541 OR6P1Q8NGX9 317 aa15.36■□□□□ 0.05
TREX1-201ENST00000433541 PTCD2Q8WV60 388 aaKnown RBP15.36■□□□□ 0.05
TREX1-201ENST00000433541 SLCO2A1Q92959 643 aa15.36■□□□□ 0.05
TREX1-201ENST00000433541 RANBP9Q96S59 729 aa15.36■□□□□ 0.05
TREX1-201ENST00000433541 CLPBQ9H078 707 aa15.36■□□□□ 0.05
TREX1-201ENST00000433541 OSGEPL1Q9H4B0 414 aa15.36■□□□□ 0.05
TREX1-201ENST00000433541 XAB2Q9HCS7 855 aaKnown RBP15.36■□□□□ 0.05
TREX1-201ENST00000433541 SYBUQ9NX95 663 aa15.36■□□□□ 0.05
TREX1-201ENST00000433541 CDC23Q9UJX2 597 aa15.36■□□□□ 0.05
TREX1-201ENST00000433541 GPR34Q9UPC5 381 aa15.36■□□□□ 0.05
TREX1-201ENST00000433541 TCAF1Q9Y4C2 921 aa15.36■□□□□ 0.05
TREX1-201ENST00000433541 BPTFQ12830 3046 aa15.35■□□□□ 0.05
TREX1-201ENST00000433541 MROH6A6NGR9 719 aa15.35■□□□□ 0.05
TREX1-201ENST00000433541 EFCAB8A8MWE9 144 aa15.35■□□□□ 0.05
TREX1-201ENST00000433541 CFAP99D6REC4 459 aa15.35■□□□□ 0.05
TREX1-201ENST00000433541 TRIM38O00635 465 aa15.35■□□□□ 0.05
TREX1-201ENST00000433541 DNALI1O14645 258 aaPredicted RBP15.35■□□□□ 0.05
TREX1-201ENST00000433541 YY2O15391 372 aa15.35■□□□□ 0.05
TREX1-201ENST00000433541 GRID2O43424 1007 aa15.35■□□□□ 0.05
TREX1-201ENST00000433541 TNFSF14O43557 240 aa15.35■□□□□ 0.05
TREX1-201ENST00000433541 VEGFDO43915 354 aa15.35■□□□□ 0.05
TREX1-201ENST00000433541 AVILO75366 819 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms