RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 RNASEH2BQ5TBB1 312 aaKnown RBP14.43□□□□□ -0.1
SGCE-204ENST00000428696 C8orf74Q6P047 294 aa14.43□□□□□ -0.1
SGCE-204ENST00000428696 DET1Q7L5Y6 550 aa14.43□□□□□ -0.1
SGCE-204ENST00000428696 NLRP9Q7RTR0 991 aa14.43□□□□□ -0.1
SGCE-204ENST00000428696 TAF8Q7Z7C8 310 aa14.43□□□□□ -0.1
SGCE-204ENST00000428696 CAND1Q86VP6 1230 aaKnown RBP14.43□□□□□ -0.1
SGCE-204ENST00000428696 MPP5Q8N3R9 675 aa14.43□□□□□ -0.1
SGCE-204ENST00000428696 OTUD6BQ8N6M0 293 aa14.43□□□□□ -0.1
SGCE-204ENST00000428696 NAT8LQ8N9F0 302 aa14.43□□□□□ -0.1
SGCE-204ENST00000428696 CDKN2AIPNLQ96HQ2 116 aa14.43□□□□□ -0.1
SGCE-204ENST00000428696 ZNF778Q96MU6 729 aa14.43□□□□□ -0.1
SGCE-204ENST00000428696 TMEM168Q9H0V1 697 aa14.43□□□□□ -0.1
SGCE-204ENST00000428696 TRIM39Q9HCM9 518 aa14.43□□□□□ -0.1
SGCE-204ENST00000428696 XAB2Q9HCS7 855 aaKnown RBP14.43□□□□□ -0.1
SGCE-204ENST00000428696 GPR27Q9NS67 375 aa14.43□□□□□ -0.1
SGCE-204ENST00000428696 ATXN10Q9UBB4 475 aa14.43□□□□□ -0.1
SGCE-204ENST00000428696 TCAF1Q9Y4C2 921 aa14.43□□□□□ -0.1
SGCE-204ENST00000428696 CCDC162PA2VCL2 907 aa14.42□□□□□ -0.1
SGCE-204ENST00000428696 OR51F1A6NGY5 319 aa14.42□□□□□ -0.1
SGCE-204ENST00000428696 TNFRSF10CO14798 259 aa14.42□□□□□ -0.1
SGCE-204ENST00000428696 AQP9O43315 295 aa14.42□□□□□ -0.1
SGCE-204ENST00000428696 CDK14O94921 469 aa14.42□□□□□ -0.1
SGCE-204ENST00000428696 MSH3P20585 1137 aa14.42□□□□□ -0.1
SGCE-204ENST00000428696 SDHBP21912 280 aa14.42□□□□□ -0.1
SGCE-204ENST00000428696 MAGEA6P43360 314 aa14.42□□□□□ -0.1
SGCE-204ENST00000428696 RPL21P46778 160 aaKnown RBP14.42□□□□□ -0.1
SGCE-204ENST00000428696 ARSDP51689 593 aa14.42□□□□□ -0.1
SGCE-204ENST00000428696 CALCOCO2Q13137 446 aa14.42□□□□□ -0.1
SGCE-204ENST00000428696 SLC14A1Q13336 389 aa14.42□□□□□ -0.1
SGCE-204ENST00000428696 DEFB133Q30KQ1 61 aa14.42□□□□□ -0.1
SGCE-204ENST00000428696 INAVAQ3KP66 663 aa14.42□□□□□ -0.1
SGCE-204ENST00000428696 BBS9Q3SYG4 887 aa14.42□□□□□ -0.1
SGCE-204ENST00000428696 PDPK2PQ6A1A2 396 aa14.42□□□□□ -0.1
SGCE-204ENST00000428696 CRTC3Q6UUV7 619 aa14.42□□□□□ -0.1
SGCE-204ENST00000428696 ZNF534Q76KX8 674 aa14.42□□□□□ -0.1
SGCE-204ENST00000428696 CHST15Q7LFX5 561 aaPredicted RBP14.42□□□□□ -0.1
SGCE-204ENST00000428696 GALNT13Q8IUC8 556 aa14.42□□□□□ -0.1
SGCE-204ENST00000428696 NAXDQ8IW45 347 aa14.42□□□□□ -0.1
SGCE-204ENST00000428696 SLC25A45Q8N413 288 aa14.42□□□□□ -0.1
SGCE-204ENST00000428696 MCUQ8NE86 351 aa14.42□□□□□ -0.1
SGCE-204ENST00000428696 ZNF548Q8NEK5 533 aaPredicted RBP14.42□□□□□ -0.1
SGCE-204ENST00000428696 DEFB124Q8NES8 71 aa14.42□□□□□ -0.1
SGCE-204ENST00000428696 SAP25Q8TEE9 199 aa14.42□□□□□ -0.1
SGCE-204ENST00000428696 PTCD2Q8WV60 388 aaKnown RBP14.42□□□□□ -0.1
SGCE-204ENST00000428696 DCUN1D1Q96GG9 259 aa14.42□□□□□ -0.1
SGCE-204ENST00000428696 COX14Q96I36 57 aa14.42□□□□□ -0.1
SGCE-204ENST00000428696 PWWP2AQ96N64 755 aa14.42□□□□□ -0.1
SGCE-204ENST00000428696 SERPINB12Q96P63 405 aa14.42□□□□□ -0.1
SGCE-204ENST00000428696 ERP44Q9BS26 406 aa14.42□□□□□ -0.1
SGCE-204ENST00000428696 LRRC1Q9BTT6 524 aa14.42□□□□□ -0.1
SGCE-204ENST00000428696 CARD6Q9BX69 1037 aa14.42□□□□□ -0.1
SGCE-204ENST00000428696 FRMD8Q9BZ67 464 aaPredicted RBP14.42□□□□□ -0.1
SGCE-204ENST00000428696 SLC32A1Q9H598 525 aa14.42□□□□□ -0.1
SGCE-204ENST00000428696 BTBD3Q9Y2F9 522 aa14.42□□□□□ -0.1
SGCE-204ENST00000428696 CFAP54Q96N23 3096 aa14.42□□□□□ -0.1
SGCE-204ENST00000428696 ESPNB1AK53 854 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 FUCA1P04066 466 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 ANXA6P08133 673 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 CELA2BP08218 269 aaPredicted RBP14.41□□□□□ -0.1
SGCE-204ENST00000428696 PRSS56P0CW18 603 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 ALPPL2P10696 532 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 MLNP12872 115 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 ZNF8P17098 575 aaPredicted RBP14.41□□□□□ -0.1
SGCE-204ENST00000428696 NMBRP28336 390 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 GRK6P43250 576 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 CDKN1CP49918 316 aaPredicted RBP14.41□□□□□ -0.1
SGCE-204ENST00000428696 LIMK1P53667 647 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 XIAPP98170 497 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 TMEM115Q12893 351 aaPredicted RBP14.41□□□□□ -0.1
SGCE-204ENST00000428696 NFATC2Q13469 925 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 PEX6Q13608 980 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 MORF4L2Q15014 288 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 ELOCQ15369 112 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 PLA2G4EQ3MJ16 856 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 LDLRAP1Q5SW96 308 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 FNBP1LQ5T0N5 605 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 GPRC6AQ5T6X5 926 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 ADGRG6Q86SQ4 1221 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 CEP112Q8N8E3 955 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 NAT14Q8WUY8 206 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 SCG3Q8WXD2 468 aaKnown RBP14.41□□□□□ -0.1
SGCE-204ENST00000428696 RANBP9Q96S59 729 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 LRRC61Q9BV99 259 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 RAB17Q9H0T7 212 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 SIRPGQ9P1W8 387 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 GULP1Q9UBP9 304 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 TMPRSS11EQ9UL52 423 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 SLC17A4Q9Y2C5 497 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 PLEKHM1Q9Y4G2 1056 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 PCDHGB2Q9Y5G2 931 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 CACNA1EQ15878 2313 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 GAPDHSO14556 408 aaPredicted RBP14.41□□□□□ -0.1
SGCE-204ENST00000428696 SLC30A4O14863 429 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 FLRT2O43155 660 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 GRID2O43424 1007 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 PCDHGA12O60330 932 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 VAPBO95292 243 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 GOT2P00505 430 aaKnown RBP14.41□□□□□ -0.1
SGCE-204ENST00000428696 ZNF883P0CG24 379 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 IVDP26440 423 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms