RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 BRD4O60885 1362 aaPredicted RBP3.72□□□□□ -1.81
SF3B1-205ENST00000424674 TBC1D3DA0A087WVF3 549 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 TBC1D3IA0A087WXS9 549 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 A0A087WZY1 265 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 TBC1D3EA0A087X179 549 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 TBC1D3KA0A087X1G2 549 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 C13orf42A0A1B0GVH6 325 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 GRID2IPA4D2P6 1211 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 TRIM49BA6NDI0 452 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 TBC1D3BA6NDS4 549 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 TBC1D3FA6NER0 549 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-205ENST00000424674 ZSCAN5BA6NJL1 495 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 YDJCA8MPS7 323 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 AHRRA9YTQ3 701 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 TBC1D3LB9A6J9 549 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 QSOX1O00391 747 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 PLK4O00444 970 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 SOCS6O14544 535 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 MEIS2O14770 477 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 RGS10O43665 173 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 LIASO43766 372 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 USP12O75317 370 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 SCGB2A1O75556 95 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 ITGA10O75578 1167 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 RHBDL1O75783 438 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 TRUB2O95900 331 aaKnown RBP3.71□□□□□ -1.82
SF3B1-205ENST00000424674 SERPINC1P01008 464 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 RLN1P04808 185 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 TBC1D3HP0C7X1 549 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 VCLP18206 1134 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 FPR1P21462 350 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 ACHEP22303 614 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 PRKACBP22694 351 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 PROZP22891 400 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 CTNNA2P26232 953 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 ZFP36P26651 326 aaKnown RBP3.71□□□□□ -1.82
SF3B1-205ENST00000424674 PTPN4P29074 926 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 PRKAR1BP31321 381 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 APOBEC3AP31941 199 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-205ENST00000424674 OTX2P32243 289 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 BMI1P35226 326 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 PTPN7P35236 360 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 RFC2P35250 354 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 NUP62P37198 522 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-205ENST00000424674 GSTM5P46439 218 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 CLCNKAP51800 687 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 METAP1P53582 386 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 PDE1AP54750 535 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 MAP3K7CLP57077 242 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 CTAG1AP78358 180 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 TAP1Q03518 808 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 TSTA3Q13630 321 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-205ENST00000424674 HNRNPDQ14103 355 aaKnown RBP3.71□□□□□ -1.82
SF3B1-205ENST00000424674 ARHGAP19Q14CB8 494 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 KARSQ15046 597 aaKnown RBP3.71□□□□□ -1.82
SF3B1-205ENST00000424674 PCGF3Q3KNV8 242 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 XKR3Q5GH77 459 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 ANKRD40Q6AI12 368 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 TBC1D3GQ6DHY5 549 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 TBC1D3CQ6IPX1 549 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 CLEC2AQ6UVW9 174 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 MTSS1LQ765P7 747 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 CENPQQ7L2Z9 268 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-205ENST00000424674 GPRIN1Q7Z2K8 1008 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 GDF7Q7Z4P5 450 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 ABI3BPQ7Z7G0 1075 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 ZNF410Q86VK4 478 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 AMZ2Q86W34 360 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 ZNF573Q86YE8 665 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 VRK3Q8IV63 474 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 SIAH3Q8IW03 269 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 DHX40Q8IX18 779 aaKnown RBP3.71□□□□□ -1.82
SF3B1-205ENST00000424674 PM20D2Q8IYS1 436 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 TBC1D3Q8IZP1 549 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-205ENST00000424674 TTC5Q8N0Z6 440 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 ARFGAP2Q8N6H7 521 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 LINC00469Q8N7U9 141 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 ZNF321PQ8N8H1 164 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 RNF169Q8NCN4 708 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 FAM46DQ8NEK8 389 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 DBF4BQ8NFT6 615 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 OR52E1Q8NGJ3 308 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 LILRB4Q8NHJ6 448 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 ZNF671Q8TAW3 534 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 LRRC8CQ8TDW0 803 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 ACTRT2Q8TDY3 377 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 RAB40AQ8WXH6 277 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 CNOT9Q92600 299 aaKnown RBP3.71□□□□□ -1.82
SF3B1-205ENST00000424674 LPGAT1Q92604 370 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 SCAMP4Q969E2 229 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 GTF3C6Q969F1 213 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 LRRC39Q96DD0 335 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 CCDC51Q96ER9 411 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 DHTKD1Q96HY7 919 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-205ENST00000424674 FAR2Q96K12 515 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 LINC00615Q96LM1 132 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-205ENST00000424674 PRICKLE1Q96MT3 831 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-205ENST00000424674 DCLRE1CQ96SD1 692 aaKnown RBP3.71□□□□□ -1.82
SF3B1-205ENST00000424674 EIF3CQ99613 913 aaKnown RBP3.71□□□□□ -1.82
SF3B1-205ENST00000424674 ZSCAN5AQ9BUG6 496 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms