RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 ITGA9Q13797 1035 aa10.84□□□□□ -0.67
USP49-204ENST00000423567 GTF2H3Q13889 308 aa10.84□□□□□ -0.67
USP49-204ENST00000423567 SPIDRQ14159 915 aa10.84□□□□□ -0.67
USP49-204ENST00000423567 TAF1AQ15573 450 aaPredicted RBP10.84□□□□□ -0.67
USP49-204ENST00000423567 ST3GAL2Q16842 350 aa10.84□□□□□ -0.67
USP49-204ENST00000423567 C14orf28Q4W4Y0 310 aa10.84□□□□□ -0.67
USP49-204ENST00000423567 OGFOD3Q6PK18 319 aa10.84□□□□□ -0.67
USP49-204ENST00000423567 RANBP10Q6VN20 620 aa10.84□□□□□ -0.67
USP49-204ENST00000423567 PACS2Q86VP3 889 aa10.84□□□□□ -0.67
USP49-204ENST00000423567 TTC30BQ8N4P2 665 aa10.84□□□□□ -0.67
USP49-204ENST00000423567 CCDC89Q8N998 374 aa10.84□□□□□ -0.67
USP49-204ENST00000423567 ANKK1Q8NFD2 765 aa10.84□□□□□ -0.67
USP49-204ENST00000423567 GPR156Q8NFN8 814 aa10.84□□□□□ -0.67
USP49-204ENST00000423567 DTX3LQ8TDB6 740 aa10.84□□□□□ -0.67
USP49-204ENST00000423567 C1orf54Q8WWF1 131 aa10.84□□□□□ -0.67
USP49-204ENST00000423567 ZCCHC14Q8WYQ9 949 aaKnown RBP10.84□□□□□ -0.67
USP49-204ENST00000423567 GLYATL1Q969I3 302 aa10.84□□□□□ -0.67
USP49-204ENST00000423567 CCDC74AQ96AQ1 378 aa10.84□□□□□ -0.67
USP49-204ENST00000423567 NXPE2Q96DL1 559 aa10.84□□□□□ -0.67
USP49-204ENST00000423567 TTC25Q96NG3 672 aa10.84□□□□□ -0.67
USP49-204ENST00000423567 VPS35Q96QK1 796 aa10.84□□□□□ -0.67
USP49-204ENST00000423567 APOL2Q9BQE5 337 aa10.84□□□□□ -0.67
USP49-204ENST00000423567 GORASP1Q9BQQ3 440 aa10.84□□□□□ -0.67
USP49-204ENST00000423567 ZCCHC2Q9C0B9 1178 aaKnown RBP10.84□□□□□ -0.67
USP49-204ENST00000423567 OR2AG1Q9H205 316 aa10.84□□□□□ -0.67
USP49-204ENST00000423567 CCDC86Q9H6F5 360 aaKnown RBP10.84□□□□□ -0.67
USP49-204ENST00000423567 TRIM39Q9HCM9 518 aa10.84□□□□□ -0.67
USP49-204ENST00000423567 PLA2G2EQ9NZK7 142 aa10.84□□□□□ -0.67
USP49-204ENST00000423567 IL17CQ9P0M4 197 aa10.84□□□□□ -0.67
USP49-204ENST00000423567 CNOT6Q9ULM6 557 aaKnown RBP10.84□□□□□ -0.67
USP49-204ENST00000423567 ZKSCAN5Q9Y2L8 839 aa10.84□□□□□ -0.67
USP49-204ENST00000423567 TDRD6O60522 2096 aaKnown RBP10.83□□□□□ -0.68
USP49-204ENST00000423567 TRABD2BA6NFA1 517 aa10.83□□□□□ -0.68
USP49-204ENST00000423567 ERI2A8K979 691 aaKnown RBP10.83□□□□□ -0.68
USP49-204ENST00000423567 RHPN2P1A8MT19 583 aa10.83□□□□□ -0.68
USP49-204ENST00000423567 E7EVH7 732 aa10.83□□□□□ -0.68
USP49-204ENST00000423567 GRID2O43424 1007 aa10.83□□□□□ -0.68
USP49-204ENST00000423567 VEGFDO43915 354 aa10.83□□□□□ -0.68
USP49-204ENST00000423567 NUAK1O60285 661 aa10.83□□□□□ -0.68
USP49-204ENST00000423567 NOBOXO60393 691 aa10.83□□□□□ -0.68
USP49-204ENST00000423567 DNAJC6O75061 913 aa10.83□□□□□ -0.68
USP49-204ENST00000423567 GAS8O95995 478 aa10.83□□□□□ -0.68
USP49-204ENST00000423567 FGGP02679 453 aa10.83□□□□□ -0.68
USP49-204ENST00000423567 SLC2A4P14672 509 aa10.83□□□□□ -0.68
USP49-204ENST00000423567 LPOP22079 712 aaPredicted RBP10.83□□□□□ -0.68
USP49-204ENST00000423567 ADRA1AP35348 466 aa10.83□□□□□ -0.68
USP49-204ENST00000423567 FDFT1P37268 417 aa10.83□□□□□ -0.68
USP49-204ENST00000423567 GDF10P55107 478 aa10.83□□□□□ -0.68
USP49-204ENST00000423567 SNX1Q13596 522 aa10.83□□□□□ -0.68
USP49-204ENST00000423567 SPARCL1Q14515 664 aa10.83□□□□□ -0.68
USP49-204ENST00000423567 CCNG2Q16589 344 aa10.83□□□□□ -0.68
USP49-204ENST00000423567 LONRF2Q1L5Z9 754 aa10.83□□□□□ -0.68
USP49-204ENST00000423567 PERM1Q5SV97 790 aa10.83□□□□□ -0.68
USP49-204ENST00000423567 CERCAMQ5T4B2 595 aa10.83□□□□□ -0.68
USP49-204ENST00000423567 CDCP2Q5VXM1 449 aa10.83□□□□□ -0.68
USP49-204ENST00000423567 FAM151BQ6UXP7 276 aa10.83□□□□□ -0.68
USP49-204ENST00000423567 RBM44Q6ZP01 1051 aaKnown RBP10.83□□□□□ -0.68
USP49-204ENST00000423567 CHST15Q7LFX5 561 aaPredicted RBP10.83□□□□□ -0.68
USP49-204ENST00000423567 LINC00523Q86TU6 105 aa10.83□□□□□ -0.68
USP49-204ENST00000423567 NRROSQ86YC3 692 aa10.83□□□□□ -0.68
USP49-204ENST00000423567 MARCH9Q86YJ5 346 aa10.83□□□□□ -0.68
USP49-204ENST00000423567 DCBLD1Q8N8Z6 715 aa10.83□□□□□ -0.68
USP49-204ENST00000423567 KDF1Q8NAX2 398 aaPredicted RBP10.83□□□□□ -0.68
USP49-204ENST00000423567 BRSK1Q8TDC3 778 aa10.83□□□□□ -0.68
USP49-204ENST00000423567 GRAMD1AQ96CP6 724 aa10.83□□□□□ -0.68
USP49-204ENST00000423567 RTP4Q96DX8 246 aa10.83□□□□□ -0.68
USP49-204ENST00000423567 TLR10Q9BXR5 811 aa10.83□□□□□ -0.68
USP49-204ENST00000423567 HOMER3Q9NSC5 361 aa10.83□□□□□ -0.68
USP49-204ENST00000423567 SPATS2LQ9NUQ6 558 aaKnown RBP10.83□□□□□ -0.68
USP49-204ENST00000423567 LRIT1Q9P2V4 623 aa10.83□□□□□ -0.68
USP49-204ENST00000423567 ATXN10Q9UBB4 475 aa10.83□□□□□ -0.68
USP49-204ENST00000423567 APPL1Q9UKG1 709 aa10.83□□□□□ -0.68
USP49-204ENST00000423567 JRKLQ9Y4A0 524 aa10.83□□□□□ -0.68
USP49-204ENST00000423567 OAS3Q9Y6K5 1087 aaKnown RBP10.83□□□□□ -0.68
USP49-204ENST00000423567 AK5Q9Y6K8 562 aa10.83□□□□□ -0.68
USP49-204ENST00000423567 BUD23O43709 281 aaKnown RBP10.82□□□□□ -0.68
USP49-204ENST00000423567 NUDT21O43809 227 aaKnown RBP10.82□□□□□ -0.68
USP49-204ENST00000423567 KIF5CO60282 957 aa10.82□□□□□ -0.68
USP49-204ENST00000423567 USP12O75317 370 aa10.82□□□□□ -0.68
USP49-204ENST00000423567 CSO75390 466 aaKnown RBP10.82□□□□□ -0.68
USP49-204ENST00000423567 CDK14O94921 469 aa10.82□□□□□ -0.68
USP49-204ENST00000423567 METTL18O95568 372 aa10.82□□□□□ -0.68
USP49-204ENST00000423567 AP2A1O95782 977 aa10.82□□□□□ -0.68
USP49-204ENST00000423567 RPLP0P05388 317 aaKnown RBP10.82□□□□□ -0.68
USP49-204ENST00000423567 ACP5P13686 325 aa10.82□□□□□ -0.68
USP49-204ENST00000423567 PNLIPP16233 465 aa10.82□□□□□ -0.68
USP49-204ENST00000423567 ZNF8P17098 575 aaPredicted RBP10.82□□□□□ -0.68
USP49-204ENST00000423567 VCLP18206 1134 aa10.82□□□□□ -0.68
USP49-204ENST00000423567 OLIG2Q13516 323 aa10.82□□□□□ -0.68
USP49-204ENST00000423567 HLTFQ14527 1009 aaKnown RBP eCLIP10.82□□□□□ -0.68
USP49-204ENST00000423567 OASLQ15646 514 aaKnown RBP10.82□□□□□ -0.68
USP49-204ENST00000423567 CHRNA6Q15825 494 aa10.82□□□□□ -0.68
USP49-204ENST00000423567 INSCQ1MX18 579 aa10.82□□□□□ -0.68
USP49-204ENST00000423567 ATP13A5Q4VNC0 1218 aa10.82□□□□□ -0.68
USP49-204ENST00000423567 LDLRAP1Q5SW96 308 aa10.82□□□□□ -0.68
USP49-204ENST00000423567 GSTA5Q7RTV2 222 aa10.82□□□□□ -0.68
USP49-204ENST00000423567 TAB3Q8N5C8 712 aaPredicted RBP10.82□□□□□ -0.68
USP49-204ENST00000423567 Q8N9G6 341 aaPredicted RBP10.82□□□□□ -0.68
USP49-204ENST00000423567 OR4K2Q8NGD2 314 aa10.82□□□□□ -0.68
USP49-204ENST00000423567 GFM1Q96RP9 751 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms