RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 BNIP3Q12983 259 aa12.29□□□□□ -0.44
CLCN4-203ENST00000421085 OTOP3Q7RTS5 596 aa12.29□□□□□ -0.44
CLCN4-203ENST00000421085 CACUL1Q86Y37 369 aa12.29□□□□□ -0.44
CLCN4-203ENST00000421085 GAD1Q99259 594 aa12.29□□□□□ -0.44
CLCN4-203ENST00000421085 EIF3KQ9UBQ5 218 aaKnown RBP12.29□□□□□ -0.44
CLCN4-203ENST00000421085 ROBO3Q96MS0 1386 aa12.29□□□□□ -0.44
CLCN4-203ENST00000421085 ZNF432O94892 652 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 ATP5C1P36542 298 aaKnown RBP12.28□□□□□ -0.44
CLCN4-203ENST00000421085 ATN1P54259 1190 aaPredicted RBP12.28□□□□□ -0.44
CLCN4-203ENST00000421085 MERTKQ12866 999 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 PLD1Q13393 1074 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 FAM151BQ6UXP7 276 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 AGMOQ6ZNB7 445 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 OAFQ86UD1 273 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 KIAA0319LQ8IZA0 1049 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 TNFAIP8L1Q8WVP5 186 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 CSPG4P5Q96PW8 444 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 AARSD1Q9BTE6 412 aaKnown RBP12.28□□□□□ -0.44
CLCN4-203ENST00000421085 MTIF3Q9H2K0 278 aaKnown RBP12.28□□□□□ -0.44
CLCN4-203ENST00000421085 HES2Q9Y543 173 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 MID1O15344 667 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 ACADMP11310 421 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 LIMK2P53671 638 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 MFSD10Q14728 455 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 VSTM1Q6UX27 236 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 PLD5Q8N7P1 536 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 CDT1Q9H211 546 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 ABCA9Q8IUA7 1624 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 ABHD14A-ACY1A0A1B0GW23 586 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 LRRC14BA6NHZ5 514 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 NOTOA8MTQ0 251 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 FGF1P05230 155 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 KIR3DL1P43629 444 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 MPP1Q00013 466 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 COLEC12Q5KU26 742 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 MON1BQ7L1V2 547 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 XYLT1Q86Y38 959 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 TBATAQ96M53 351 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 MALT1Q9UDY8 824 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 OR14I1A6ND48 311 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 hCG_2039718K7EN88 272 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 JAM2P57087 298 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 HERC3Q15034 1050 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 ULK3Q6PHR2 472 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 LAPTM4BQ86VI4 370 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 COLGALT2Q8IYK4 626 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 RASSF5Q8WWW0 418 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 TP53INP1Q96A56 240 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 AGAP2Q99490 1192 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 C2orf49Q9BVC5 232 aaPredicted RBP12.28□□□□□ -0.44
CLCN4-203ENST00000421085 GLOD4Q9HC38 313 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 SUCOQ9UBS9 1254 aaKnown RBP12.28□□□□□ -0.44
CLCN4-203ENST00000421085 DNAJB4Q9UDY4 337 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 SCGNO76038 276 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 IFNGP01579 166 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 IFNA6P05013 189 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 GTF2A2P52657 109 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 GSCP56915 257 aaPredicted RBP12.28□□□□□ -0.44
CLCN4-203ENST00000421085 CAPSQ13938 189 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 ERMAPQ96PL5 475 aaPredicted RBP12.28□□□□□ -0.44
CLCN4-203ENST00000421085 KLHL5Q96PQ7 755 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 PCDHAC1Q9H158 963 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 LHX5Q9H2C1 402 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 SNTG1Q9NSN8 517 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 SPATA31A1Q5TZJ5 1347 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 ARHGDIBP52566 201 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 RAB2AP61019 212 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 FBXO48Q5FWF7 155 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 FBXL19Q6PCT2 694 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 ZNF730Q6ZMV8 503 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 OR10A6Q8NH74 314 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 CHIAQ9BZP6 476 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 SEMA3GQ9NS98 782 aa12.28□□□□□ -0.44
CLCN4-203ENST00000421085 DEPDC5O75140 1603 aa12.27□□□□□ -0.44
CLCN4-203ENST00000421085 MFSD11O43934 449 aa12.27□□□□□ -0.44
CLCN4-203ENST00000421085 RPLP2P05387 115 aaKnown RBP12.27□□□□□ -0.44
CLCN4-203ENST00000421085 FMO3P31513 532 aa12.27□□□□□ -0.44
CLCN4-203ENST00000421085 GBE1Q04446 702 aa12.27□□□□□ -0.44
CLCN4-203ENST00000421085 FSTL4Q6MZW2 842 aa12.27□□□□□ -0.44
CLCN4-203ENST00000421085 DQX1Q8TE96 717 aaKnown RBP12.27□□□□□ -0.44
CLCN4-203ENST00000421085 HSD17B14Q9BPX1 270 aa12.27□□□□□ -0.44
CLCN4-203ENST00000421085 GATA5Q9BWX5 397 aaPredicted RBP12.27□□□□□ -0.44
CLCN4-203ENST00000421085 B3GNT5Q9BYG0 378 aa12.27□□□□□ -0.44
CLCN4-203ENST00000421085 PDGFDQ9GZP0 370 aaPredicted RBP12.27□□□□□ -0.44
CLCN4-203ENST00000421085 MAGEE1Q9HCI5 957 aa12.27□□□□□ -0.44
CLCN4-203ENST00000421085 PPM1HQ9ULR3 514 aa12.27□□□□□ -0.44
CLCN4-203ENST00000421085 GRIP1Q9Y3R0 1128 aa12.27□□□□□ -0.44
CLCN4-203ENST00000421085 KCNE2Q9Y6J6 123 aa12.27□□□□□ -0.44
CLCN4-203ENST00000421085 C1orf167Q5SNV9 1468 aa12.27□□□□□ -0.44
CLCN4-203ENST00000421085 DNAJA2O60884 412 aa12.27□□□□□ -0.45
CLCN4-203ENST00000421085 SCELO95171 688 aa12.27□□□□□ -0.45
CLCN4-203ENST00000421085 YAP1P46937 504 aaKnown RBP12.27□□□□□ -0.45
CLCN4-203ENST00000421085 SNRPD1P62314 119 aaKnown RBP12.27□□□□□ -0.45
CLCN4-203ENST00000421085 CLCQ05315 142 aa12.27□□□□□ -0.45
CLCN4-203ENST00000421085 MBTD1Q05BQ5 628 aa12.27□□□□□ -0.45
CLCN4-203ENST00000421085 SLC25A52Q3SY17 297 aa12.27□□□□□ -0.45
CLCN4-203ENST00000421085 TEX44Q53QW1 395 aa12.27□□□□□ -0.45
CLCN4-203ENST00000421085 UBE2R2Q712K3 238 aaPredicted RBP12.27□□□□□ -0.45
CLCN4-203ENST00000421085 DENND1CQ8IV53 801 aa12.27□□□□□ -0.45
CLCN4-203ENST00000421085 DCBLD1Q8N8Z6 715 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms