RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 VSTM4Q8IW00 320 aa20.18■□□□□ 0.82
MCF2L-212ENST00000420013 MAK16Q9BXY0 300 aaKnown RBP20.18■□□□□ 0.82
MCF2L-212ENST00000420013 SLC25A51Q9H1U9 297 aa20.18■□□□□ 0.82
MCF2L-212ENST00000420013 ZFYVE1Q9HBF4 777 aa20.18■□□□□ 0.82
MCF2L-212ENST00000420013 MAGEE1Q9HCI5 957 aa20.18■□□□□ 0.82
MCF2L-212ENST00000420013 PDP2Q9P2J9 529 aa20.18■□□□□ 0.82
MCF2L-212ENST00000420013 ZNHIT2Q9UHR6 403 aa20.18■□□□□ 0.82
MCF2L-212ENST00000420013 INTUQ9ULD6 942 aa20.18■□□□□ 0.82
MCF2L-212ENST00000420013 ZNF106Q9H2Y7 1883 aaKnown RBP20.18■□□□□ 0.82
MCF2L-212ENST00000420013 A6NCN8 305 aa20.17■□□□□ 0.82
MCF2L-212ENST00000420013 NUAK1O60285 661 aa20.17■□□□□ 0.82
MCF2L-212ENST00000420013 ATP1A1P05023 1023 aaKnown RBP20.17■□□□□ 0.82
MCF2L-212ENST00000420013 CCL4P13236 92 aa20.17■□□□□ 0.82
MCF2L-212ENST00000420013 F3P13726 295 aa20.17■□□□□ 0.82
MCF2L-212ENST00000420013 CLCNKAP51800 687 aa20.17■□□□□ 0.82
MCF2L-212ENST00000420013 GALNT3Q14435 633 aa20.17■□□□□ 0.82
MCF2L-212ENST00000420013 TCEAL1Q15170 157 aa20.17■□□□□ 0.82
MCF2L-212ENST00000420013 WDR74Q6RFH5 385 aaPredicted RBP20.17■□□□□ 0.82
MCF2L-212ENST00000420013 BZW1Q7L1Q6 419 aaKnown RBP20.17■□□□□ 0.82
MCF2L-212ENST00000420013 CHST15Q7LFX5 561 aaPredicted RBP20.17■□□□□ 0.82
MCF2L-212ENST00000420013 SLC9B2Q86UD5 537 aa20.17■□□□□ 0.82
MCF2L-212ENST00000420013 CNGA4Q8IV77 575 aa20.17■□□□□ 0.82
MCF2L-212ENST00000420013 RHOT1Q8IXI2 618 aa20.17■□□□□ 0.82
MCF2L-212ENST00000420013 RNF214Q8ND24 703 aa20.17■□□□□ 0.82
MCF2L-212ENST00000420013 LRRN4Q8WUT4 740 aa20.17■□□□□ 0.82
MCF2L-212ENST00000420013 TADA1Q96BN2 335 aa20.17■□□□□ 0.82
MCF2L-212ENST00000420013 TEFMQ96QE5 360 aaKnown RBP20.17■□□□□ 0.82
MCF2L-212ENST00000420013 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.17■□□□□ 0.82
MCF2L-212ENST00000420013 ASPSCR1Q9BZE9 553 aa20.17■□□□□ 0.82
MCF2L-212ENST00000420013 LILRA5A6NI73 299 aa20.16■□□□□ 0.82
MCF2L-212ENST00000420013 B8ZZF3 427 aa20.16■□□□□ 0.82
MCF2L-212ENST00000420013 J3QKU1 62 aa20.16■□□□□ 0.82
MCF2L-212ENST00000420013 FGF3P11487 239 aaPredicted RBP20.16■□□□□ 0.82
MCF2L-212ENST00000420013 ACP5P13686 325 aa20.16■□□□□ 0.82
MCF2L-212ENST00000420013 NKAIN2Q5VXU1 208 aa20.16■□□□□ 0.82
MCF2L-212ENST00000420013 RFX6Q8HWS3 928 aa20.16■□□□□ 0.82
MCF2L-212ENST00000420013 TRAM1L1Q8N609 369 aa20.16■□□□□ 0.82
MCF2L-212ENST00000420013 NHEJ1Q9H9Q4 299 aaPredicted RBP20.16■□□□□ 0.82
MCF2L-212ENST00000420013 TBC1D29Q9UFV1 150 aa20.16■□□□□ 0.82
MCF2L-212ENST00000420013 KCNK6Q9Y257 313 aa20.16■□□□□ 0.82
MCF2L-212ENST00000420013 ZNF711Q9Y462 761 aa20.16■□□□□ 0.82
MCF2L-212ENST00000420013 PCYT1BQ9Y5K3 369 aaPredicted RBP20.16■□□□□ 0.82
MCF2L-212ENST00000420013 SPTA1P02549 2419 aa20.15■□□□□ 0.82
MCF2L-212ENST00000420013 AGRPO00253 132 aa20.15■□□□□ 0.82
MCF2L-212ENST00000420013 GRID2O43424 1007 aa20.15■□□□□ 0.82
MCF2L-212ENST00000420013 NR2C2P49116 596 aa20.15■□□□□ 0.82
MCF2L-212ENST00000420013 CDK18Q07002 472 aa20.15■□□□□ 0.82
MCF2L-212ENST00000420013 IYDQ6PHW0 289 aa20.15■□□□□ 0.82
MCF2L-212ENST00000420013 VASH2Q86V25 355 aa20.15■□□□□ 0.82
MCF2L-212ENST00000420013 ART4Q93070 314 aa20.15■□□□□ 0.82
MCF2L-212ENST00000420013 AGAP3Q96P47 875 aa20.15■□□□□ 0.82
MCF2L-212ENST00000420013 CHP1Q99653 195 aa20.15■□□□□ 0.82
MCF2L-212ENST00000420013 SPATA16Q9BXB7 569 aa20.15■□□□□ 0.82
MCF2L-212ENST00000420013 SPTLC3Q9NUV7 552 aa20.15■□□□□ 0.82
MCF2L-212ENST00000420013 ADGRG1Q9Y653 693 aa20.15■□□□□ 0.82
MCF2L-212ENST00000420013 A0A0A6YYK5 440 aaPredicted RBP20.14■□□□□ 0.81
MCF2L-212ENST00000420013 MTSS1O43312 755 aa20.14■□□□□ 0.81
MCF2L-212ENST00000420013 PSTPIP1O43586 416 aa20.14■□□□□ 0.81
MCF2L-212ENST00000420013 SLC25A14O95258 325 aaPredicted RBP20.14■□□□□ 0.81
MCF2L-212ENST00000420013 NDST3O95803 873 aa20.14■□□□□ 0.81
MCF2L-212ENST00000420013 EML2O95834 649 aa20.14■□□□□ 0.81
MCF2L-212ENST00000420013 SFTPCP11686 197 aa20.14■□□□□ 0.81
MCF2L-212ENST00000420013 PPM1FP49593 454 aaPredicted RBP20.14■□□□□ 0.81
MCF2L-212ENST00000420013 SRSF6Q13247 344 aaKnown RBP20.14■□□□□ 0.81
MCF2L-212ENST00000420013 TFDP2Q14188 446 aa20.14■□□□□ 0.81
MCF2L-212ENST00000420013 TMC3Q7Z5M5 1100 aa20.14■□□□□ 0.81
MCF2L-212ENST00000420013 FAM129CQ86XR2 697 aa20.14■□□□□ 0.81
MCF2L-212ENST00000420013 GLYATL1Q969I3 302 aa20.14■□□□□ 0.81
MCF2L-212ENST00000420013 PLEKHG4BQ96PX9 1271 aa20.14■□□□□ 0.81
MCF2L-212ENST00000420013 ARHGAP9Q9BRR9 750 aa20.14■□□□□ 0.81
MCF2L-212ENST00000420013 CEP41Q9BYV8 373 aa20.14■□□□□ 0.81
MCF2L-212ENST00000420013 UCK1Q9HA47 277 aa20.14■□□□□ 0.81
MCF2L-212ENST00000420013 TRIM39Q9HCM9 518 aa20.14■□□□□ 0.81
MCF2L-212ENST00000420013 TMEM9Q9P0T7 183 aa20.14■□□□□ 0.81
MCF2L-212ENST00000420013 ATXN10Q9UBB4 475 aa20.14■□□□□ 0.81
MCF2L-212ENST00000420013 PRKAB1Q9Y478 270 aa20.14■□□□□ 0.81
MCF2L-212ENST00000420013 ASH1LQ9NR48 2969 aaKnown RBP20.14■□□□□ 0.81
MCF2L-212ENST00000420013 TLN1Q9Y490 2541 aaKnown RBP20.14■□□□□ 0.81
MCF2L-212ENST00000420013 TENM4Q6N022 2769 aa20.13■□□□□ 0.81
MCF2L-212ENST00000420013 MN1Q10571 1320 aaPredicted RBP20.13■□□□□ 0.81
MCF2L-212ENST00000420013 SPOPO43791 374 aa20.13■□□□□ 0.81
MCF2L-212ENST00000420013 VEGFDO43915 354 aa20.13■□□□□ 0.81
MCF2L-212ENST00000420013 ARSDP51689 593 aa20.13■□□□□ 0.81
MCF2L-212ENST00000420013 HADHBP55084 474 aaKnown RBP20.13■□□□□ 0.81
MCF2L-212ENST00000420013 PRKD1Q15139 912 aaPredicted RBP20.13■□□□□ 0.81
MCF2L-212ENST00000420013 TEX44Q53QW1 395 aa20.13■□□□□ 0.81
MCF2L-212ENST00000420013 DCAF12Q5T6F0 453 aa20.13■□□□□ 0.81
MCF2L-212ENST00000420013 CCDC70Q6NSX1 233 aa20.13■□□□□ 0.81
MCF2L-212ENST00000420013 NPNTQ6UXI9 565 aa20.13■□□□□ 0.81
MCF2L-212ENST00000420013 ZNF761Q86XN6 746 aaPredicted RBP20.13■□□□□ 0.81
MCF2L-212ENST00000420013 BMPERQ8N8U9 685 aa20.13■□□□□ 0.81
MCF2L-212ENST00000420013 GPR26Q8NDV2 337 aa20.13■□□□□ 0.81
MCF2L-212ENST00000420013 NKD1Q969G9 470 aa20.13■□□□□ 0.81
MCF2L-212ENST00000420013 EID2BQ96D98 161 aa20.13■□□□□ 0.81
MCF2L-212ENST00000420013 VPS35Q96QK1 796 aa20.13■□□□□ 0.81
MCF2L-212ENST00000420013 ZPBPQ9BS86 351 aa20.13■□□□□ 0.81
MCF2L-212ENST00000420013 TIMM29Q9BSF4 260 aa20.13■□□□□ 0.81
MCF2L-212ENST00000420013 GPR63Q9BZJ6 419 aa20.13■□□□□ 0.81
MCF2L-212ENST00000420013 GLOD4Q9HC38 313 aa20.13■□□□□ 0.81
MCF2L-212ENST00000420013 SLC39A1Q9NY26 324 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms