RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 OLIG2Q13516 323 aa20.11■□□□□ 0.81
GTF3A-202ENST00000419181 SPIDRQ14159 915 aa20.11■□□□□ 0.81
GTF3A-202ENST00000419181 ZDHHC20Q5W0Z9 365 aa20.11■□□□□ 0.81
GTF3A-202ENST00000419181 PHYKPLQ8IUZ5 450 aa20.11■□□□□ 0.81
GTF3A-202ENST00000419181 NAGSQ8N159 534 aa20.11■□□□□ 0.81
GTF3A-202ENST00000419181 GRAMD1AQ96CP6 724 aa20.11■□□□□ 0.81
GTF3A-202ENST00000419181 ALS2CR12Q96Q35 445 aa20.11■□□□□ 0.81
GTF3A-202ENST00000419181 VPS35Q96QK1 796 aa20.11■□□□□ 0.81
GTF3A-202ENST00000419181 APOL2Q9BQE5 337 aa20.11■□□□□ 0.81
GTF3A-202ENST00000419181 TMEM121Q9BTD3 319 aa20.11■□□□□ 0.81
GTF3A-202ENST00000419181 TRIM39Q9HCM9 518 aa20.11■□□□□ 0.81
GTF3A-202ENST00000419181 ARFGAP3Q9NP61 516 aa20.11■□□□□ 0.81
GTF3A-202ENST00000419181 IL26Q9NPH9 171 aa20.11■□□□□ 0.81
GTF3A-202ENST00000419181 TMPRSS11EQ9UL52 423 aa20.11■□□□□ 0.81
GTF3A-202ENST00000419181 DSPP15924 2871 aaKnown RBP20.11■□□□□ 0.81
GTF3A-202ENST00000419181 A0A1W2PQM1 296 aa20.1■□□□□ 0.81
GTF3A-202ENST00000419181 GPR89AB7ZAQ6 455 aa20.1■□□□□ 0.81
GTF3A-202ENST00000419181 USP12O75317 370 aa20.1■□□□□ 0.81
GTF3A-202ENST00000419181 PPFIA2O75334 1257 aa20.1■□□□□ 0.81
GTF3A-202ENST00000419181 ECEL1O95672 775 aa20.1■□□□□ 0.81
GTF3A-202ENST00000419181 RPLP0P05388 317 aaKnown RBP20.1■□□□□ 0.81
GTF3A-202ENST00000419181 GPR89BP0CG08 455 aa20.1■□□□□ 0.81
GTF3A-202ENST00000419181 ZNF8P17098 575 aaPredicted RBP20.1■□□□□ 0.81
GTF3A-202ENST00000419181 CCL7P80098 99 aa20.1■□□□□ 0.81
GTF3A-202ENST00000419181 RPS6KA1Q15418 735 aa20.1■□□□□ 0.81
GTF3A-202ENST00000419181 ATP13A5Q4VNC0 1218 aa20.1■□□□□ 0.81
GTF3A-202ENST00000419181 ZNF648Q5T619 568 aaPredicted RBP20.1■□□□□ 0.81
GTF3A-202ENST00000419181 ARHGEF18Q6ZSZ5 1173 aa20.1■□□□□ 0.81
GTF3A-202ENST00000419181 CHST15Q7LFX5 561 aaPredicted RBP20.1■□□□□ 0.81
GTF3A-202ENST00000419181 ZNF438Q7Z4V0 828 aa20.1■□□□□ 0.81
GTF3A-202ENST00000419181 SPRED1Q7Z699 444 aa20.1■□□□□ 0.81
GTF3A-202ENST00000419181 ADGRG6Q86SQ4 1221 aa20.1■□□□□ 0.81
GTF3A-202ENST00000419181 SLC13A5Q86YT5 568 aaPredicted RBP20.1■□□□□ 0.81
GTF3A-202ENST00000419181 CCNJLQ8IV13 435 aa20.1■□□□□ 0.81
GTF3A-202ENST00000419181 ARL14Q8N4G2 192 aa20.1■□□□□ 0.81
GTF3A-202ENST00000419181 PATE1Q8WXA2 126 aa20.1■□□□□ 0.81
GTF3A-202ENST00000419181 ATG4AQ8WYN0 398 aa20.1■□□□□ 0.81
GTF3A-202ENST00000419181 GFM1Q96RP9 751 aaKnown RBP20.1■□□□□ 0.81
GTF3A-202ENST00000419181 OR2AG1Q9H205 316 aa20.1■□□□□ 0.81
GTF3A-202ENST00000419181 SYNDIG1Q9H7V2 258 aa20.1■□□□□ 0.81
GTF3A-202ENST00000419181 PPP2R2CQ9Y2T4 447 aa20.1■□□□□ 0.81
GTF3A-202ENST00000419181 ENTPD2Q9Y5L3 495 aa20.1■□□□□ 0.81
GTF3A-202ENST00000419181 AK5Q9Y6K8 562 aa20.1■□□□□ 0.81
GTF3A-202ENST00000419181 KIF26BQ2KJY2 2108 aa20.09■□□□□ 0.81
GTF3A-202ENST00000419181 D6RAR5 112 aa20.09■□□□□ 0.81
GTF3A-202ENST00000419181 CHUKO15111 745 aa20.09■□□□□ 0.81
GTF3A-202ENST00000419181 GRID2O43424 1007 aa20.09■□□□□ 0.81
GTF3A-202ENST00000419181 BUD23O43709 281 aaKnown RBP20.09■□□□□ 0.81
GTF3A-202ENST00000419181 SPAM1P38567 509 aa20.09■□□□□ 0.81
GTF3A-202ENST00000419181 MSLNQ13421 630 aaPredicted RBP20.09■□□□□ 0.81
GTF3A-202ENST00000419181 NR1D2Q14995 579 aa20.09■□□□□ 0.81
GTF3A-202ENST00000419181 PARP6Q2NL67 630 aa20.09■□□□□ 0.81
GTF3A-202ENST00000419181 KCTD11Q693B1 232 aa20.09■□□□□ 0.81
GTF3A-202ENST00000419181 DENND5AQ6IQ26 1287 aa20.09■□□□□ 0.81
GTF3A-202ENST00000419181 RTP4Q96DX8 246 aa20.09■□□□□ 0.81
GTF3A-202ENST00000419181 ATXN7L3BQ96GX2 97 aa20.09■□□□□ 0.81
GTF3A-202ENST00000419181 TBL1YQ9BQ87 522 aa20.09■□□□□ 0.81
GTF3A-202ENST00000419181 FRMD8P1Q9BZ68 369 aaPredicted RBP20.09■□□□□ 0.81
GTF3A-202ENST00000419181 LRRN3Q9H3W5 708 aa20.09■□□□□ 0.81
GTF3A-202ENST00000419181 ARNT2Q9HBZ2 717 aa20.09■□□□□ 0.81
GTF3A-202ENST00000419181 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.09■□□□□ 0.818e-6■■■□□ 18.6
GTF3A-202ENST00000419181 RAXQ9Y2V3 346 aa20.09■□□□□ 0.81
GTF3A-202ENST00000419181 PKP3Q9Y446 797 aa20.09■□□□□ 0.81
GTF3A-202ENST00000419181 ARL5AQ9Y689 179 aa20.09■□□□□ 0.81
GTF3A-202ENST00000419181 BPTFQ12830 3046 aa20.09■□□□□ 0.81
GTF3A-202ENST00000419181 LAMA5O15230 3695 aa20.09■□□□□ 0.81
GTF3A-202ENST00000419181 URB1O60287 2271 aaKnown RBP20.09■□□□□ 0.81
GTF3A-202ENST00000419181 GAPDHSO14556 408 aaPredicted RBP20.08■□□□□ 0.81
GTF3A-202ENST00000419181 LIASO43766 372 aa20.08■□□□□ 0.81
GTF3A-202ENST00000419181 BRINP1O60477 761 aa20.08■□□□□ 0.81
GTF3A-202ENST00000419181 METTL18O95568 372 aa20.08■□□□□ 0.81
GTF3A-202ENST00000419181 ACP5P13686 325 aa20.08■□□□□ 0.81
GTF3A-202ENST00000419181 TAF1AQ15573 450 aaPredicted RBP20.08■□□□□ 0.81
GTF3A-202ENST00000419181 OASLQ15646 514 aaKnown RBP20.08■□□□□ 0.81
GTF3A-202ENST00000419181 KHDC1Q4VXA5 237 aaKnown RBP20.08■□□□□ 0.81
GTF3A-202ENST00000419181 Q8N9G6 341 aaPredicted RBP20.08■□□□□ 0.81
GTF3A-202ENST00000419181 TRIM58Q8NG06 486 aa20.08■□□□□ 0.81
GTF3A-202ENST00000419181 KCNK6Q9Y257 313 aa20.08■□□□□ 0.81
GTF3A-202ENST00000419181 GLYATL1P3A0A0U1RQE8 302 aa20.07■□□□□ 0.8
GTF3A-202ENST00000419181 A0A1W2PNU3 283 aaPredicted RBP20.07■□□□□ 0.8
GTF3A-202ENST00000419181 GOLGA6L3A6NEY3 463 aa20.07■□□□□ 0.8
GTF3A-202ENST00000419181 STX7O15400 261 aaKnown RBP20.07■□□□□ 0.8
GTF3A-202ENST00000419181 VEGFDO43915 354 aa20.07■□□□□ 0.8
GTF3A-202ENST00000419181 MTX2O75431 263 aa20.07■□□□□ 0.8
GTF3A-202ENST00000419181 EML2O95834 649 aa20.07■□□□□ 0.8
GTF3A-202ENST00000419181 MPOP05164 745 aa20.07■□□□□ 0.8
GTF3A-202ENST00000419181 LPOP22079 712 aaPredicted RBP20.07■□□□□ 0.8
GTF3A-202ENST00000419181 LSSP48449 732 aa20.07■□□□□ 0.8
GTF3A-202ENST00000419181 B4GALNT1Q00973 533 aa20.07■□□□□ 0.8
GTF3A-202ENST00000419181 SPARCL1Q14515 664 aa20.07■□□□□ 0.8
GTF3A-202ENST00000419181 PTPRCAPQ14761 206 aa20.07■□□□□ 0.8
GTF3A-202ENST00000419181 CHRNA6Q15825 494 aa20.07■□□□□ 0.8
GTF3A-202ENST00000419181 P3H1Q32P28 736 aa20.07■□□□□ 0.8
GTF3A-202ENST00000419181 FAM151BQ6UXP7 276 aa20.07■□□□□ 0.8
GTF3A-202ENST00000419181 SFRP1Q8N474 314 aa20.07■□□□□ 0.8
GTF3A-202ENST00000419181 BRSK1Q8TDC3 778 aa20.07■□□□□ 0.8
GTF3A-202ENST00000419181 TLR10Q9BXR5 811 aa20.07■□□□□ 0.8
GTF3A-202ENST00000419181 POLR1BQ9H9Y6 1135 aa20.07■□□□□ 0.8
GTF3A-202ENST00000419181 TBC1D29Q9UFV1 150 aa20.07■□□□□ 0.8
GTF3A-202ENST00000419181 FEZ2Q9UHY8 353 aaPredicted RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms