RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 UBL4BQ8N7F7 174 aa16.31■□□□□ 0.2
LINC00404-201ENST00000418660 ZNF248Q8NDW4 579 aa16.31■□□□□ 0.2
LINC00404-201ENST00000418660 IPMKQ8NFU5 416 aa16.31■□□□□ 0.2
LINC00404-201ENST00000418660 GLYATL1Q969I3 302 aa16.31■□□□□ 0.2
LINC00404-201ENST00000418660 PLEKHG4BQ96PX9 1271 aa16.31■□□□□ 0.2
LINC00404-201ENST00000418660 FOXP3Q9BZS1 431 aa16.31■□□□□ 0.2
LINC00404-201ENST00000418660 GBA3Q9H227 469 aa16.31■□□□□ 0.2
LINC00404-201ENST00000418660 EPB41L5Q9HCM4 733 aa16.31■□□□□ 0.2
LINC00404-201ENST00000418660 HACD3Q9P035 362 aa16.31■□□□□ 0.2
LINC00404-201ENST00000418660 ATXN10Q9UBB4 475 aa16.31■□□□□ 0.2
LINC00404-201ENST00000418660 ATXN7L1Q9ULK2 861 aaPredicted RBP16.31■□□□□ 0.2
LINC00404-201ENST00000418660 PRKAB1Q9Y478 270 aa16.31■□□□□ 0.2
LINC00404-201ENST00000418660 URB1O60287 2271 aaKnown RBP16.3■□□□□ 0.2
LINC00404-201ENST00000418660 CHD6Q8TD26 2715 aa16.3■□□□□ 0.2
LINC00404-201ENST00000418660 GPR89AB7ZAQ6 455 aa16.3■□□□□ 0.2
LINC00404-201ENST00000418660 PPM1DO15297 605 aa16.3■□□□□ 0.2
LINC00404-201ENST00000418660 GRID2O43424 1007 aa16.3■□□□□ 0.2
LINC00404-201ENST00000418660 ANXA9O76027 345 aa16.3■□□□□ 0.2
LINC00404-201ENST00000418660 GPR89BP0CG08 455 aa16.3■□□□□ 0.2
LINC00404-201ENST00000418660 ZNF8P17098 575 aaPredicted RBP16.3■□□□□ 0.2
LINC00404-201ENST00000418660 ALDH4A1P30038 563 aa16.3■□□□□ 0.2
LINC00404-201ENST00000418660 CHRNA4P43681 627 aa16.3■□□□□ 0.2
LINC00404-201ENST00000418660 OR1D5P58170 312 aa16.3■□□□□ 0.2
LINC00404-201ENST00000418660 ZFP36L1Q07352 338 aaKnown RBP16.3■□□□□ 0.2
LINC00404-201ENST00000418660 CCDC173Q0VFZ6 552 aa16.3■□□□□ 0.2
LINC00404-201ENST00000418660 SLC1A5Q15758 541 aa16.3■□□□□ 0.2
LINC00404-201ENST00000418660 CLPPQ16740 277 aaPredicted RBP16.3■□□□□ 0.2
LINC00404-201ENST00000418660 ZDHHC20Q5W0Z9 365 aa16.3■□□□□ 0.2
LINC00404-201ENST00000418660 DARS2Q6PI48 645 aaKnown RBP16.3■□□□□ 0.2
LINC00404-201ENST00000418660 FOXR1Q6PIV2 292 aa16.3■□□□□ 0.2
LINC00404-201ENST00000418660 RAB11FIP2Q7L804 512 aa16.3■□□□□ 0.2
LINC00404-201ENST00000418660 PDZD3Q86UT5 571 aa16.3■□□□□ 0.2
LINC00404-201ENST00000418660 PHYKPLQ8IUZ5 450 aa16.3■□□□□ 0.2
LINC00404-201ENST00000418660 FBXO39Q8N4B4 442 aa16.3■□□□□ 0.2
LINC00404-201ENST00000418660 TTC30BQ8N4P2 665 aa16.3■□□□□ 0.2
LINC00404-201ENST00000418660 BPIFA1Q9NP55 256 aa16.3■□□□□ 0.2
LINC00404-201ENST00000418660 ADGRG1Q9Y653 693 aa16.3■□□□□ 0.2
LINC00404-201ENST00000418660 A0A0U1RQJ8 604 aa16.29■□□□□ 0.2
LINC00404-201ENST00000418660 PMS2P1A4D2B8 440 aa16.29■□□□□ 0.2
LINC00404-201ENST00000418660 CDRT15L2A8MXV6 281 aa16.29■□□□□ 0.2
LINC00404-201ENST00000418660 PLD2O14939 933 aa16.29■□□□□ 0.2
LINC00404-201ENST00000418660 KCNN4O15554 427 aa16.29■□□□□ 0.2
LINC00404-201ENST00000418660 ZNF189O75820 626 aaPredicted RBP16.29■□□□□ 0.2
LINC00404-201ENST00000418660 STK10O94804 968 aaKnown RBP16.29■□□□□ 0.2
LINC00404-201ENST00000418660 TNFSF15O95150 251 aa16.29■□□□□ 0.2
LINC00404-201ENST00000418660 CPNE6O95741 557 aa16.29■□□□□ 0.2
LINC00404-201ENST00000418660 ACP5P13686 325 aa16.29■□□□□ 0.2
LINC00404-201ENST00000418660 GEMP55040 296 aa16.29■□□□□ 0.2
LINC00404-201ENST00000418660 ANKRD20A2Q5SQ80 823 aa16.29■□□□□ 0.2
LINC00404-201ENST00000418660 ZNF648Q5T619 568 aaPredicted RBP16.29■□□□□ 0.2
LINC00404-201ENST00000418660 ANKRD20A1Q5TYW2 823 aa16.29■□□□□ 0.2
LINC00404-201ENST00000418660 ANKRD20A3Q5VUR7 823 aa16.29■□□□□ 0.2
LINC00404-201ENST00000418660 ADGRG6Q86SQ4 1221 aa16.29■□□□□ 0.2
LINC00404-201ENST00000418660 PIM3Q86V86 326 aa16.29■□□□□ 0.2
LINC00404-201ENST00000418660 DTX3LQ8TDB6 740 aa16.29■□□□□ 0.2
LINC00404-201ENST00000418660 VPS35Q96QK1 796 aa16.29■□□□□ 0.2
LINC00404-201ENST00000418660 FSD1LQ9BXM9 530 aa16.29■□□□□ 0.2
LINC00404-201ENST00000418660 OR2AG1Q9H205 316 aa16.29■□□□□ 0.2
LINC00404-201ENST00000418660 ARFGAP3Q9NP61 516 aa16.29■□□□□ 0.2
LINC00404-201ENST00000418660 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.29■□□□□ 0.2
LINC00404-201ENST00000418660 GOLGA6L9A6NEM1 432 aa16.28■□□□□ 0.2
LINC00404-201ENST00000418660 CHUKO15111 745 aa16.28■□□□□ 0.2
LINC00404-201ENST00000418660 DDX3YO15523 660 aaKnown RBP16.28■□□□□ 0.2
LINC00404-201ENST00000418660 VEGFDO43915 354 aa16.28■□□□□ 0.2
LINC00404-201ENST00000418660 EML2O95834 649 aa16.28■□□□□ 0.2
LINC00404-201ENST00000418660 FTCDO95954 541 aa16.28■□□□□ 0.2
LINC00404-201ENST00000418660 AGTP01019 485 aa16.28■□□□□ 0.2
LINC00404-201ENST00000418660 ITGA2BP08514 1039 aa16.28■□□□□ 0.2
LINC00404-201ENST00000418660 CD1CP29017 333 aa16.28■□□□□ 0.2
LINC00404-201ENST00000418660 UGT1A5P35504 534 aa16.28■□□□□ 0.2
LINC00404-201ENST00000418660 FASLGP48023 281 aa16.28■□□□□ 0.2
LINC00404-201ENST00000418660 CLCNKAP51800 687 aa16.28■□□□□ 0.2
LINC00404-201ENST00000418660 SQSTM1Q13501 440 aa16.28■□□□□ 0.2
LINC00404-201ENST00000418660 PRPSAP1Q14558 356 aa16.28■□□□□ 0.2
LINC00404-201ENST00000418660 AMZ1Q400G9 498 aa16.28■□□□□ 0.2
LINC00404-201ENST00000418660 MAP9Q49MG5 647 aa16.28■□□□□ 0.2
LINC00404-201ENST00000418660 TMPRSS9Q7Z410 1059 aa16.28■□□□□ 0.2
LINC00404-201ENST00000418660 GLT6D1Q7Z4J2 308 aa16.28■□□□□ 0.2
LINC00404-201ENST00000418660 CLEC14AQ86T13 490 aa16.28■□□□□ 0.2
LINC00404-201ENST00000418660 SLITRK4Q8IW52 837 aa16.28■□□□□ 0.2
LINC00404-201ENST00000418660 SPACA3Q8IXA5 215 aa16.28■□□□□ 0.2
LINC00404-201ENST00000418660 SFRP1Q8N474 314 aa16.28■□□□□ 0.2
LINC00404-201ENST00000418660 RNF10Q8N5U6 811 aaKnown RBP16.28■□□□□ 0.2
LINC00404-201ENST00000418660 TTC13Q8NBP0 860 aa16.28■□□□□ 0.2
LINC00404-201ENST00000418660 BLOC1S5Q8TDH9 187 aa16.28■□□□□ 0.2
LINC00404-201ENST00000418660 SLC37A2Q8TED4 501 aa16.28■□□□□ 0.2
LINC00404-201ENST00000418660 TMEM159Q96B96 161 aa16.28■□□□□ 0.2
LINC00404-201ENST00000418660 FAM118BQ9BPY3 351 aa16.28■□□□□ 0.2
LINC00404-201ENST00000418660 GORASP1Q9BQQ3 440 aa16.28■□□□□ 0.2
LINC00404-201ENST00000418660 IL26Q9NPH9 171 aa16.28■□□□□ 0.2
LINC00404-201ENST00000418660 IL17CQ9P0M4 197 aa16.28■□□□□ 0.2
LINC00404-201ENST00000418660 TBC1D29Q9UFV1 150 aa16.28■□□□□ 0.2
LINC00404-201ENST00000418660 PACSIN2Q9UNF0 486 aaPredicted RBP16.28■□□□□ 0.2
LINC00404-201ENST00000418660 KCNK6Q9Y257 313 aa16.28■□□□□ 0.2
LINC00404-201ENST00000418660 AAR2Q9Y312 384 aaKnown RBP16.28■□□□□ 0.2
LINC00404-201ENST00000418660 CFAP47Q6ZTR5 3102 aa16.27■□□□□ 0.2
LINC00404-201ENST00000418660 TRBV23OR9-2A0A075B6M9 112 aa16.27■□□□□ 0.2
LINC00404-201ENST00000418660 A6NCN8 305 aa16.27■□□□□ 0.2
LINC00404-201ENST00000418660 PTMAP06454 111 aaKnown RBP16.27■□□□□ 0.2
LINC00404-201ENST00000418660 SLC2A4P14672 509 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms