RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 UGT1A9O60656 530 aa22.87■■□□□ 1.25
SMARCB1-205ENST00000417137 UGT1A6P19224 532 aa22.87■■□□□ 1.25
SMARCB1-205ENST00000417137 UGT1A1P22309 533 aa22.87■■□□□ 1.25
SMARCB1-205ENST00000417137 UGT1A4P22310 534 aa22.87■■□□□ 1.25
SMARCB1-205ENST00000417137 UGT1A3P35503 534 aa22.87■■□□□ 1.25
SMARCB1-205ENST00000417137 UGT1A5P35504 534 aa22.87■■□□□ 1.25
SMARCB1-205ENST00000417137 PTGIRP43119 386 aa22.87■■□□□ 1.25
SMARCB1-205ENST00000417137 SESN2P58004 480 aaPredicted RBP22.87■■□□□ 1.25
SMARCB1-205ENST00000417137 ILF3Q12906 894 aaKnown RBP eCLIP22.87■■□□□ 1.251e-9■■□□□ 11.4
SMARCB1-205ENST00000417137 DHX34Q14147 1143 aaKnown RBP22.87■■□□□ 1.25
SMARCB1-205ENST00000417137 PCID2Q5JVF3 399 aa22.87■■□□□ 1.25
SMARCB1-205ENST00000417137 KCTD16Q68DU8 428 aa22.87■■□□□ 1.25
SMARCB1-205ENST00000417137 MARK2Q7KZI7 788 aaKnown RBP22.87■■□□□ 1.25
SMARCB1-205ENST00000417137 TAF8Q7Z7C8 310 aa22.87■■□□□ 1.25
SMARCB1-205ENST00000417137 MCUQ8NE86 351 aa22.87■■□□□ 1.25
SMARCB1-205ENST00000417137 ZNF592Q92610 1267 aa22.87■■□□□ 1.25
SMARCB1-205ENST00000417137 OR2M4Q96R27 311 aa22.87■■□□□ 1.25
SMARCB1-205ENST00000417137 GSDMCQ9BYG8 508 aa22.87■■□□□ 1.25
SMARCB1-205ENST00000417137 ZCCHC2Q9C0B9 1178 aaKnown RBP22.87■■□□□ 1.25
SMARCB1-205ENST00000417137 CLPBQ9H078 707 aa22.87■■□□□ 1.25
SMARCB1-205ENST00000417137 TMEM168Q9H0V1 697 aa22.87■■□□□ 1.25
SMARCB1-205ENST00000417137 ASB8Q9H765 288 aa22.87■■□□□ 1.25
SMARCB1-205ENST00000417137 SUDS3Q9H7L9 328 aaPredicted RBP22.87■■□□□ 1.25
SMARCB1-205ENST00000417137 CAAP1Q9H8G2 361 aa22.87■■□□□ 1.25
SMARCB1-205ENST00000417137 UGT1A7Q9HAW7 530 aa22.87■■□□□ 1.25
SMARCB1-205ENST00000417137 UGT1A10Q9HAW8 530 aa22.87■■□□□ 1.25
SMARCB1-205ENST00000417137 UGT1A8Q9HAW9 530 aa22.87■■□□□ 1.25
SMARCB1-205ENST00000417137 SMOXQ9NWM0 555 aa22.87■■□□□ 1.25
SMARCB1-205ENST00000417137 CABIN1Q9Y6J0 2220 aa22.87■■□□□ 1.25
SMARCB1-205ENST00000417137 LAMA1P25391 3075 aa22.87■■□□□ 1.25
SMARCB1-205ENST00000417137 H7C0S8 307 aa22.86■■□□□ 1.25
SMARCB1-205ENST00000417137 TRIM38O00635 465 aa22.86■■□□□ 1.25
SMARCB1-205ENST00000417137 SIGLEC6O43699 453 aa22.86■■□□□ 1.25
SMARCB1-205ENST00000417137 URI1O94763 535 aaPredicted RBP22.86■■□□□ 1.25
SMARCB1-205ENST00000417137 FUCA1P04066 466 aa22.86■■□□□ 1.25
SMARCB1-205ENST00000417137 MLNP12872 115 aa22.86■■□□□ 1.25
SMARCB1-205ENST00000417137 ITGALP20701 1170 aa22.86■■□□□ 1.25
SMARCB1-205ENST00000417137 SIM1P81133 766 aaPredicted RBP22.86■■□□□ 1.25
SMARCB1-205ENST00000417137 XIAPP98170 497 aa22.86■■□□□ 1.25
SMARCB1-205ENST00000417137 CKAP4Q07065 602 aaKnown RBP22.86■■□□□ 1.25
SMARCB1-205ENST00000417137 NFATC2Q13469 925 aa22.86■■□□□ 1.25
SMARCB1-205ENST00000417137 GTF2H3Q13889 308 aa22.86■■□□□ 1.25
SMARCB1-205ENST00000417137 KCTD19Q17RG1 926 aaPredicted RBP22.86■■□□□ 1.25
SMARCB1-205ENST00000417137 DEFB133Q30KQ1 61 aa22.86■■□□□ 1.25
SMARCB1-205ENST00000417137 CCDC38Q502W7 563 aa22.86■■□□□ 1.25
SMARCB1-205ENST00000417137 PYCR3Q53H96 274 aa22.86■■□□□ 1.25
SMARCB1-205ENST00000417137 ZCCHC8Q6NZY4 707 aaKnown RBP22.86■■□□□ 1.25
SMARCB1-205ENST00000417137 PPIL6Q8IXY8 311 aa22.86■■□□□ 1.25
SMARCB1-205ENST00000417137 FAM181AQ8N9Y4 354 aa22.86■■□□□ 1.25
SMARCB1-205ENST00000417137 SPATA4Q8NEY3 305 aa22.86■■□□□ 1.25
SMARCB1-205ENST00000417137 PEX13Q92968 403 aa22.86■■□□□ 1.25
SMARCB1-205ENST00000417137 ULK4Q96C45 1275 aa22.86■■□□□ 1.25
SMARCB1-205ENST00000417137 CDKN2AIPNLQ96HQ2 116 aa22.86■■□□□ 1.25
SMARCB1-205ENST00000417137 OR2AG1Q9H205 316 aa22.86■■□□□ 1.25
SMARCB1-205ENST00000417137 XAB2Q9HCS7 855 aaKnown RBP22.86■■□□□ 1.25
SMARCB1-205ENST00000417137 ATXN10Q9UBB4 475 aa22.86■■□□□ 1.25
SMARCB1-205ENST00000417137 CDC23Q9UJX2 597 aa22.86■■□□□ 1.25
SMARCB1-205ENST00000417137 TCRBV7S3A2A0A539 114 aa22.85■■□□□ 1.25
SMARCB1-205ENST00000417137 GAPDHSO14556 408 aaPredicted RBP22.85■■□□□ 1.25
SMARCB1-205ENST00000417137 GIPC1O14908 333 aa22.85■■□□□ 1.25
SMARCB1-205ENST00000417137 NUAK1O60285 661 aa22.85■■□□□ 1.25
SMARCB1-205ENST00000417137 DNAJC6O75061 913 aa22.85■■□□□ 1.25
SMARCB1-205ENST00000417137 CDK14O94921 469 aa22.85■■□□□ 1.25
SMARCB1-205ENST00000417137 GIMD1P0DJR0 217 aa22.85■■□□□ 1.25
SMARCB1-205ENST00000417137 PSMA3P25788 255 aa22.85■■□□□ 1.25
SMARCB1-205ENST00000417137 DUSP3P51452 185 aaPredicted RBP22.85■■□□□ 1.25
SMARCB1-205ENST00000417137 TMEM115Q12893 351 aaPredicted RBP22.85■■□□□ 1.25
SMARCB1-205ENST00000417137 TUBB2AQ13885 445 aa22.85■■□□□ 1.25
SMARCB1-205ENST00000417137 LRP8Q14114 963 aa22.85■■□□□ 1.25
SMARCB1-205ENST00000417137 GPR33Q49SQ1 333 aa22.85■■□□□ 1.25
SMARCB1-205ENST00000417137 TSTD2Q5T7W7 516 aa22.85■■□□□ 1.25
SMARCB1-205ENST00000417137 ARMC3Q5W041 872 aa22.85■■□□□ 1.25
SMARCB1-205ENST00000417137 SNX20Q7Z614 316 aa22.85■■□□□ 1.25
SMARCB1-205ENST00000417137 ADGRG6Q86SQ4 1221 aa22.85■■□□□ 1.25
SMARCB1-205ENST00000417137 GPBAR1Q8TDU6 330 aa22.85■■□□□ 1.25
SMARCB1-205ENST00000417137 KRT12Q99456 494 aa22.85■■□□□ 1.25
SMARCB1-205ENST00000417137 TUBB2BQ9BVA1 445 aa22.85■■□□□ 1.25
SMARCB1-205ENST00000417137 ARFGAP3Q9NP61 516 aa22.85■■□□□ 1.25
SMARCB1-205ENST00000417137 CRLS1Q9UJA2 301 aa22.85■■□□□ 1.25
SMARCB1-205ENST00000417137 TMPRSS11EQ9UL52 423 aa22.85■■□□□ 1.25
SMARCB1-205ENST00000417137 APOBEC2Q9Y235 224 aaKnown RBP22.85■■□□□ 1.25
SMARCB1-205ENST00000417137 TCAF1Q9Y4C2 921 aa22.85■■□□□ 1.25
SMARCB1-205ENST00000417137 TP53BP1Q12888 1972 aaPredicted RBP22.84■■□□□ 1.25
SMARCB1-205ENST00000417137 GRID2O43424 1007 aa22.84■■□□□ 1.25
SMARCB1-205ENST00000417137 ZNF8P17098 575 aaPredicted RBP22.84■■□□□ 1.25
SMARCB1-205ENST00000417137 CKMT2P17540 419 aa22.84■■□□□ 1.25
SMARCB1-205ENST00000417137 MC4RP32245 332 aa22.84■■□□□ 1.25
SMARCB1-205ENST00000417137 RPIAP49247 311 aa22.84■■□□□ 1.25
SMARCB1-205ENST00000417137 DAB2P98082 770 aa22.84■■□□□ 1.25
SMARCB1-205ENST00000417137 ZRANB3Q5FWF4 1079 aa22.84■■□□□ 1.25
SMARCB1-205ENST00000417137 MAATS1Q7Z4T9 603 aa22.84■■□□□ 1.25
SMARCB1-205ENST00000417137 JAMLQ86YT9 394 aa22.84■■□□□ 1.25
SMARCB1-205ENST00000417137 DDHD1Q8NEL9 900 aa22.84■■□□□ 1.25
SMARCB1-205ENST00000417137 PTCD2Q8WV60 388 aaKnown RBP22.84■■□□□ 1.25
SMARCB1-205ENST00000417137 HEXDCQ8WVB3 486 aa22.84■■□□□ 1.25
SMARCB1-205ENST00000417137 GPR34Q9UPC5 381 aa22.84■■□□□ 1.25
SMARCB1-205ENST00000417137 SPAARA0A1B0GVQ0 90 aa22.83■■□□□ 1.25
SMARCB1-205ENST00000417137 DNALI1O14645 258 aaPredicted RBP22.83■■□□□ 1.25
SMARCB1-205ENST00000417137 CELA2BP08218 269 aaPredicted RBP22.83■■□□□ 1.25
SMARCB1-205ENST00000417137 RALBP11234 206 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms