RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 MAGEE1Q9HCI5 957 aa2.66□□□□□ -1.98
RNU6-1140P-201ENST00000410517 SPAG4Q9NPE6 437 aa2.66□□□□□ -1.98
RNU6-1140P-201ENST00000410517 TLR8Q9NR97 1041 aaKnown RBP2.66□□□□□ -1.98
RNU6-1140P-201ENST00000410517 SEPT11Q9NVA2 429 aaKnown RBP2.66□□□□□ -1.98
RNU6-1140P-201ENST00000410517 MRPL15Q9P015 296 aaKnown RBP2.66□□□□□ -1.98
RNU6-1140P-201ENST00000410517 CPSF2Q9P2I0 782 aaKnown RBP2.66□□□□□ -1.98
RNU6-1140P-201ENST00000410517 COPG2Q9UBF2 871 aa2.66□□□□□ -1.98
RNU6-1140P-201ENST00000410517 HSPB7Q9UBY9 170 aa2.66□□□□□ -1.98
RNU6-1140P-201ENST00000410517 SEC63Q9UGP8 760 aaKnown RBP2.66□□□□□ -1.98
RNU6-1140P-201ENST00000410517 TTC7AQ9ULT0 858 aaPredicted RBP2.66□□□□□ -1.98
RNU6-1140P-201ENST00000410517 CORO1CQ9ULV4 474 aaPredicted RBP2.66□□□□□ -1.98
RNU6-1140P-201ENST00000410517 BTBD3Q9Y2F9 522 aa2.66□□□□□ -1.98
RNU6-1140P-201ENST00000410517 A3GALT2U3KPV4 340 aa2.66□□□□□ -1.98
RNU6-1140P-201ENST00000410517 ZNF831Q5JPB2 1677 aa2.66□□□□□ -1.98
RNU6-1140P-201ENST00000410517 USP54Q70EL1 1684 aa2.66□□□□□ -1.98
RNU6-1140P-201ENST00000410517 CUL9Q8IWT3 2517 aa2.66□□□□□ -1.98
RNU6-1140P-201ENST00000410517 WNK3Q9BYP7 1800 aa2.65□□□□□ -1.98
RNU6-1140P-201ENST00000410517 KDRP35968 1356 aa2.65□□□□□ -1.98
RNU6-1140P-201ENST00000410517 MEGF6O75095 1541 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 RPS10-NUDT3A0A1W2PQS6 291 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 DYTNA2CJ06 578 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 TARSL2A2RTX5 802 aaKnown RBP2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 DDTLA6NHG4 134 aaPredicted RBP2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 MYMKA6NI61 221 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 C17orf100A8MU93 164 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 CDRT15L2A8MXV6 281 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 A8MZ25 164 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 KDM4EB2RXH2 506 aaPredicted RBP2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 KLRF2D3W0D1 207 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 EIF5BO60841 1220 aaKnown RBP2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 PTP4A3O75365 173 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 DDNO94850 711 aaPredicted RBP2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 CENPBP07199 599 aaPredicted RBP2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 NHLRC4P0CG21 123 aaPredicted RBP2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 VPREB1P12018 145 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 NAGAP17050 411 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 UBA1P22314 1058 aaKnown RBP2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 MCM3P25205 808 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 RPS12P25398 132 aaKnown RBP2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 RYKP34925 604 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 RPL3P39023 403 aaKnown RBP2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 PEX5P50542 639 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 ARSEP51690 589 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 CLCN5P51795 746 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 PGGT1BP53609 377 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 CREB5Q02930 508 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 SREBF2Q12772 1141 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 ITPK1Q13572 414 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 LPIN1Q14693 890 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 HLFQ16534 295 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 SLC45A4Q5BKX6 768 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 FAM133BQ5BKY9 247 aaKnown RBP2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 DCAF12L2Q5VW00 463 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 DAB2IPQ5VWQ8 1189 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 FAM205BPQ63HN1 556 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 KCTD18Q6PI47 426 aaPredicted RBP2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 FBXO46Q6PJ61 603 aaPredicted RBP2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 Q6ZTC4 211 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 PRPF39Q86UA1 669 aaKnown RBP2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 MCEMP1Q8IX19 187 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 C17orf53Q8N3J3 647 aaPredicted RBP2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 TTC30BQ8N4P2 665 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 TMEM199Q8N511 208 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 TEX45Q8NA69 505 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 PSPC1Q8WXF1 523 aaKnown RBP2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 ZNF622Q969S3 477 aaKnown RBP eCLIP2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 MMABQ96EY8 250 aaPredicted RBP2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 RSRC1Q96IZ7 334 aaKnown RBP2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 C1orf74Q96LT6 269 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 SEPT5Q99719 369 aaPredicted RBP2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 FAM110AQ9BQ89 295 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 PCGF1Q9BSM1 259 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 FTOQ9C0B1 505 aaKnown RBP eCLIP2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 LHPPQ9H008 270 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 ISCUQ9H1K1 167 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 EBF3Q9H4W6 596 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 GIMAP4Q9NUV9 329 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 TMEM184CQ9NVA4 438 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 NKIRAS2Q9NYR9 191 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 PLK2Q9NYY3 685 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 MARCH4Q9P2E8 410 aaPredicted RBP2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 NLKQ9UBE8 527 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 ADD3Q9UEY8 706 aaKnown RBP2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 POLG2Q9UHN1 485 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 SLCO3A1Q9UIG8 710 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 FBXW11Q9UKB1 542 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 ZNF215Q9UL58 517 aaPredicted RBP2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 PPIEQ9UNP9 301 aaKnown RBP2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 C5P01031 1676 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 NCAPD2Q15021 1401 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 MKI67P46013 3256 aaKnown RBP2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 KIF7Q2M1P5 1343 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 RNF123Q5XPI4 1314 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 ATXN2Q99700 1313 aaKnown RBP2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 C4AP0C0L4 1744 aa2.65□□□□□ -1.99
RNU6-1140P-201ENST00000410517 KIF13BQ9NQT8 1826 aa2.64□□□□□ -1.99
RNU6-1140P-201ENST00000410517 A0A0A0MQY5 61 aa2.64□□□□□ -1.99
RNU6-1140P-201ENST00000410517 GOLGA6L9A6NEM1 432 aa2.64□□□□□ -1.99
RNU6-1140P-201ENST00000410517 TMEM202A6NGA9 273 aa2.64□□□□□ -1.99
RNU6-1140P-201ENST00000410517 HSPB2A8KAH6 182 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms