RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 HOXD9P28356 352 aaPredicted RBP15.1■□□□□ 0.01
MCF2L-205ENST00000397017 HNF1BP35680 557 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 AGTR2P50052 363 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 STX5Q13190 355 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 PRKG2Q13237 762 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 PGS1Q32NB8 556 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 C22orf39Q6P5X5 142 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 BEND7Q8N7W2 519 aaPredicted RBP15.1■□□□□ 0.01
MCF2L-205ENST00000397017 MRPL43Q8N983 215 aaKnown RBP15.1■□□□□ 0.01
MCF2L-205ENST00000397017 PCYOX1LQ8NBM8 494 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 FAM13CQ8NE31 585 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 ZNF599Q96NL3 588 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 PANX3Q96QZ0 392 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 PKMYT1Q99640 499 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 BOCQ9BWV1 1114 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 NOL11Q9H8H0 719 aaKnown RBP15.1■□□□□ 0.01
MCF2L-205ENST00000397017 OXSMQ9NWU1 459 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 TAS2R1Q9NYW7 299 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 ARHGAP10A1A4S6 786 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 SLCO1B7G3V0H7 640 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 MRASO14807 208 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 HNRNPCL1O60812 293 aaKnown RBP15.1■□□□□ 0.01
MCF2L-205ENST00000397017 OR4F21O95013 312 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 LRATO95237 230 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 SERPINA6P08185 405 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 GABRB3P28472 473 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 GDI1P31150 447 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 KLF10Q13118 480 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 MRPL58Q14197 206 aaKnown RBP15.1■□□□□ 0.01
MCF2L-205ENST00000397017 MYLK3Q32MK0 819 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 CARD16Q5EG05 197 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 BEND5Q7L4P6 421 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 SLC43A3Q8NBI5 491 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 MCOLN3Q8TDD5 553 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 HERC2P3Q9BVR0 1158 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 VN1R3Q9BXE9 311 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 C20orf27Q9GZN8 174 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 FBRSL1Q9HCM7 1045 aaKnown RBP15.1■□□□□ 0.01
MCF2L-205ENST00000397017 SPASTQ9UBP0 616 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 BAG5Q9UL15 447 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 MTF2Q9Y483 593 aaPredicted RBP15.1■□□□□ 0.01
MCF2L-205ENST00000397017 PTGDR2Q9Y5Y4 395 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 RNASEH2AO75792 299 aaKnown RBP15.09■□□□□ 0.01
MCF2L-205ENST00000397017 PIK3R1P27986 724 aa15.09■□□□□ 0.01
MCF2L-205ENST00000397017 ARF5P84085 180 aa15.09■□□□□ 0.01
MCF2L-205ENST00000397017 NRG1Q02297 640 aaPredicted RBP15.09■□□□□ 0.01
MCF2L-205ENST00000397017 CACNG1Q06432 222 aa15.09■□□□□ 0.01
MCF2L-205ENST00000397017 GRAMD4Q6IC98 578 aa15.09■□□□□ 0.01
MCF2L-205ENST00000397017 C16orf89Q6UX73 402 aa15.09■□□□□ 0.01
MCF2L-205ENST00000397017 HPS6Q86YV9 775 aa15.09■□□□□ 0.01
MCF2L-205ENST00000397017 C2CD4AQ8NCU7 369 aaPredicted RBP15.09■□□□□ 0.01
MCF2L-205ENST00000397017 KXD1Q9BQD3 176 aa15.09■□□□□ 0.01
MCF2L-205ENST00000397017 PRAMEF12O95522 483 aa15.09■□□□□ 0.01
MCF2L-205ENST00000397017 CCND1P24385 295 aa15.09■□□□□ 0.01
MCF2L-205ENST00000397017 STC1P52823 247 aa15.09■□□□□ 0.01
MCF2L-205ENST00000397017 MRPS22P82650 360 aaKnown RBP15.09■□□□□ 0.01
MCF2L-205ENST00000397017 ZNF33AQ06730 810 aa15.09■□□□□ 0.01
MCF2L-205ENST00000397017 PREPLQ4J6C6 727 aaPredicted RBP15.09■□□□□ 0.01
MCF2L-205ENST00000397017 ATP6AP1LQ52LC2 224 aa15.09■□□□□ 0.01
MCF2L-205ENST00000397017 STEAP4Q687X5 459 aa15.09■□□□□ 0.01
MCF2L-205ENST00000397017 CGB2Q6NT52 195 aa15.09■□□□□ 0.01
MCF2L-205ENST00000397017 ITFG1Q8TB96 612 aa15.09■□□□□ 0.01
MCF2L-205ENST00000397017 CSGALNACT1Q8TDX6 532 aa15.09■□□□□ 0.01
MCF2L-205ENST00000397017 SAR1AQ9NR31 198 aa15.09■□□□□ 0.01
MCF2L-205ENST00000397017 SPHK2Q9NRA0 654 aa15.09■□□□□ 0.01
MCF2L-205ENST00000397017 LEFTY1O75610 366 aa15.09■□□□□ 0.01
MCF2L-205ENST00000397017 S1PR4O95977 384 aa15.09■□□□□ 0.01
MCF2L-205ENST00000397017 DLDP09622 509 aaKnown RBP15.09■□□□□ 0.01
MCF2L-205ENST00000397017 CES1P23141 567 aa15.09■□□□□ 0.01
MCF2L-205ENST00000397017 SGCGQ13326 291 aa15.09■□□□□ 0.01
MCF2L-205ENST00000397017 AP5B1Q2VPB7 878 aa15.09■□□□□ 0.01
MCF2L-205ENST00000397017 C6orf89Q6UWU4 347 aa15.09■□□□□ 0.01
MCF2L-205ENST00000397017 HMX2A2RU54 273 aa15.08■□□□□ 0.01
MCF2L-205ENST00000397017 BHMG1C9JSJ3 638 aaPredicted RBP15.08■□□□□ 0.01
MCF2L-205ENST00000397017 SLC31A1O15431 190 aa15.08■□□□□ 0.01
MCF2L-205ENST00000397017 ADH5P11766 374 aa15.08■□□□□ 0.01
MCF2L-205ENST00000397017 FSHRP23945 695 aa15.08■□□□□ 0.01
MCF2L-205ENST00000397017 TIE1P35590 1138 aa15.08■□□□□ 0.01
MCF2L-205ENST00000397017 TBCCQ15814 346 aa15.08■□□□□ 0.01
MCF2L-205ENST00000397017 UBE2R2Q712K3 238 aaPredicted RBP15.08■□□□□ 0.01
MCF2L-205ENST00000397017 PHACTR4Q8IZ21 702 aa15.08■□□□□ 0.01
MCF2L-205ENST00000397017 OR9I1Q8NGQ6 314 aa15.08■□□□□ 0.01
MCF2L-205ENST00000397017 SELENOMQ8WWX9 145 aa15.08■□□□□ 0.01
MCF2L-205ENST00000397017 EFHD1Q9BUP0 239 aa15.08■□□□□ 0.01
MCF2L-205ENST00000397017 AK5Q9Y6K8 562 aa15.08■□□□□ 0.01
MCF2L-205ENST00000397017 GSC2O15499 205 aa15.08■□□□□ 0
MCF2L-205ENST00000397017 FFAR2O15552 330 aa15.08■□□□□ 0
MCF2L-205ENST00000397017 SKIV2L2P42285 1042 aaKnown RBP15.08■□□□□ 0
MCF2L-205ENST00000397017 C1QTNF8P60827 252 aa15.08■□□□□ 0
MCF2L-205ENST00000397017 RPL38P63173 70 aaKnown RBP15.08■□□□□ 0
MCF2L-205ENST00000397017 ACAP2Q15057 778 aa15.08■□□□□ 0
MCF2L-205ENST00000397017 TMEM259Q4ZIN3 620 aa15.08■□□□□ 0
MCF2L-205ENST00000397017 TREML1Q86YW5 311 aa15.08■□□□□ 0
MCF2L-205ENST00000397017 MDGA1Q8NFP4 955 aa15.08■□□□□ 0
MCF2L-205ENST00000397017 SHKBP1Q8TBC3 707 aa15.08■□□□□ 0
MCF2L-205ENST00000397017 TBCDQ9BTW9 1192 aa15.08■□□□□ 0
MCF2L-205ENST00000397017 RIOK2Q9BVS4 552 aaKnown RBP15.08■□□□□ 0
MCF2L-205ENST00000397017 MCOLN1Q9GZU1 580 aa15.08■□□□□ 0
MCF2L-205ENST00000397017 SIRPGQ9P1W8 387 aa15.08■□□□□ 0
MCF2L-205ENST00000397017 VTI1BQ9UEU0 232 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms