RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 RBP1P09455 135 aa19.17■□□□□ 0.66
LMNB1-202ENST00000395354 CD9P21926 228 aa19.17■□□□□ 0.66
LMNB1-202ENST00000395354 MC4RP32245 332 aa19.17■□□□□ 0.66
LMNB1-202ENST00000395354 CCNHP51946 323 aaPredicted RBP19.17■□□□□ 0.66
LMNB1-202ENST00000395354 ARFIP2P53365 341 aa19.17■□□□□ 0.66
LMNB1-202ENST00000395354 PTPN5P54829 565 aa19.17■□□□□ 0.66
LMNB1-202ENST00000395354 ABCE1P61221 599 aaKnown RBP19.17■□□□□ 0.66
LMNB1-202ENST00000395354 DLG1Q12959 904 aa19.17■□□□□ 0.66
LMNB1-202ENST00000395354 CAMK2GQ13555 558 aaPredicted RBP19.17■□□□□ 0.66
LMNB1-202ENST00000395354 ZNF460Q14592 562 aa19.17■□□□□ 0.66
LMNB1-202ENST00000395354 STARD3Q14849 445 aa19.17■□□□□ 0.66
LMNB1-202ENST00000395354 CWF19L1Q69YN2 538 aaKnown RBP19.17■□□□□ 0.66
LMNB1-202ENST00000395354 ZNF549Q6P9A3 640 aa19.17■□□□□ 0.66
LMNB1-202ENST00000395354 ZCCHC23Q6ZST2 131 aa19.17■□□□□ 0.66
LMNB1-202ENST00000395354 PPP4R1Q8TF05 950 aa19.17■□□□□ 0.66
LMNB1-202ENST00000395354 LPGAT1Q92604 370 aa19.17■□□□□ 0.66
LMNB1-202ENST00000395354 THOC1Q96FV9 657 aaKnown RBP19.17■□□□□ 0.66
LMNB1-202ENST00000395354 CHRDQ9H2X0 955 aa19.17■□□□□ 0.66
LMNB1-202ENST00000395354 SUV39H2Q9H5I1 410 aa19.17■□□□□ 0.66
LMNB1-202ENST00000395354 FAM96AQ9H5X1 160 aa19.17■□□□□ 0.66
LMNB1-202ENST00000395354 KCNK13Q9HB14 408 aa19.17■□□□□ 0.66
LMNB1-202ENST00000395354 CRYL1Q9Y2S2 319 aa19.17■□□□□ 0.66
LMNB1-202ENST00000395354 A0A1W2PQF6 199 aa19.16■□□□□ 0.66
LMNB1-202ENST00000395354 SBK3P0C264 359 aa19.16■□□□□ 0.66
LMNB1-202ENST00000395354 ADARP55265 1226 aaKnown RBP19.16■□□□□ 0.66
LMNB1-202ENST00000395354 CDKN2DP55273 166 aa19.16■□□□□ 0.66
LMNB1-202ENST00000395354 XIAPP98170 497 aa19.16■□□□□ 0.66
LMNB1-202ENST00000395354 CACNG1Q06432 222 aa19.16■□□□□ 0.66
LMNB1-202ENST00000395354 PEX6Q13608 980 aa19.16■□□□□ 0.66
LMNB1-202ENST00000395354 ITGA9Q13797 1035 aa19.16■□□□□ 0.66
LMNB1-202ENST00000395354 ELAVL3Q14576 367 aaKnown RBP19.16■□□□□ 0.66
LMNB1-202ENST00000395354 ACAP2Q15057 778 aa19.16■□□□□ 0.66
LMNB1-202ENST00000395354 CDKN3Q16667 212 aa19.16■□□□□ 0.66
LMNB1-202ENST00000395354 LIPMQ5VYY2 423 aa19.16■□□□□ 0.66
LMNB1-202ENST00000395354 KIAA1211LQ6NV74 962 aa19.16■□□□□ 0.66
LMNB1-202ENST00000395354 LYSMD3Q7Z3D4 306 aa19.16■□□□□ 0.66
LMNB1-202ENST00000395354 STK40Q8N2I9 435 aa19.16■□□□□ 0.66
LMNB1-202ENST00000395354 FITM2Q8N6M3 262 aa19.16■□□□□ 0.66
LMNB1-202ENST00000395354 CHST14Q8NCH0 376 aa19.16■□□□□ 0.66
LMNB1-202ENST00000395354 HEXDCQ8WVB3 486 aa19.16■□□□□ 0.66
LMNB1-202ENST00000395354 VOPP1Q96AW1 172 aa19.16■□□□□ 0.66
LMNB1-202ENST00000395354 LRRC37BQ96QE4 947 aa19.16■□□□□ 0.66
LMNB1-202ENST00000395354 FAM129BQ96TA1 746 aa19.16■□□□□ 0.66
LMNB1-202ENST00000395354 HEPHQ9BQS7 1158 aa19.16■□□□□ 0.66
LMNB1-202ENST00000395354 ZFYVE1Q9HBF4 777 aa19.16■□□□□ 0.66
LMNB1-202ENST00000395354 SLC12A4Q9UP95 1085 aa19.16■□□□□ 0.66
LMNB1-202ENST00000395354 COMMD10Q9Y6G5 202 aa19.16■□□□□ 0.66
LMNB1-202ENST00000395354 TNFRSF10AO00220 468 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 SNUPNO95149 360 aaKnown RBP19.15■□□□□ 0.66
LMNB1-202ENST00000395354 ALPIP09923 528 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 CTPS1P17812 591 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 AOC1P19801 751 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 COL9A1P20849 921 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 GKP32189 559 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 CRY1Q16526 586 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 TMEM92Q6UXU6 159 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 CERS6Q6ZMG9 384 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 SYT13Q7L8C5 426 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 WDR75Q8IWA0 830 aaKnown RBP19.15■□□□□ 0.66
LMNB1-202ENST00000395354 CBARPQ8N350 705 aaPredicted RBP19.15■□□□□ 0.66
LMNB1-202ENST00000395354 SPEM1Q8N4L4 309 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 PAF1Q8N7H5 531 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 OR8D1Q8WZ84 308 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.15■□□□□ 0.667e-6■■■■■ 27.5
LMNB1-202ENST00000395354 PBXIP1Q96AQ6 731 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 CCDC126Q96EE4 140 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 C20orf27Q9GZN8 174 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 CCDC68Q9H2F9 335 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 EPHX3Q9H6B9 360 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 CPSF2Q9P2I0 782 aaKnown RBP19.15■□□□□ 0.66
LMNB1-202ENST00000395354 XPR1Q9UBH6 696 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 DCTN4Q9UJW0 460 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 ZDBF2Q9HCK1 2354 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 CKAP5Q14008 2032 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 TK2O00142 265 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 FSBPO95073 299 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 SLC4A1P02730 911 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 CCDC166P0CW27 439 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 HNF1BP35680 557 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 PPARGP37231 505 aaPredicted RBP19.15■□□□□ 0.66
LMNB1-202ENST00000395354 ACTN3Q08043 901 aaPredicted RBP19.15■□□□□ 0.66
LMNB1-202ENST00000395354 CSHL1Q14406 222 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 TECRLQ5HYJ1 363 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 PIWIL2Q8TC59 973 aaKnown RBP19.15■□□□□ 0.66
LMNB1-202ENST00000395354 EID2BQ96D98 161 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 SCRN2Q96FV2 425 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 TMEM120AQ9BXJ8 343 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 STN1Q9H668 368 aaKnown RBP19.15■□□□□ 0.66
LMNB1-202ENST00000395354 ZDHHC6Q9H6R6 413 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 DLGAP2Q9P1A6 1054 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 IL36AQ9UHA7 158 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 APPL1Q9UKG1 709 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 PRDM4Q9UKN5 801 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 SLC30A1Q9Y6M5 507 aa19.15■□□□□ 0.66
LMNB1-202ENST00000395354 MUC3AQ02505 3323 aa19.14■□□□□ 0.65
LMNB1-202ENST00000395354 A0A0G2JND7 137 aa19.14■□□□□ 0.65
LMNB1-202ENST00000395354 ITM2AO43736 263 aa19.14■□□□□ 0.65
LMNB1-202ENST00000395354 DNAJC6O75061 913 aa19.14■□□□□ 0.65
LMNB1-202ENST00000395354 UBOX5O94941 541 aa19.14■□□□□ 0.65
LMNB1-202ENST00000395354 ATP5F1P24539 256 aaPredicted RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms