RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 ADAMTS3O15072 1205 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 ERAL1O75616 437 aaKnown RBP14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 ATP6AP2O75787 350 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 WFS1O76024 890 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 PRPS2P11908 318 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 C4BPBP20851 252 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 GPAT3Q53EU6 434 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 ESRP1Q6NXG1 681 aaKnown RBP14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 MSANTD2Q6P1R3 559 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 CENPIQ92674 756 aaPredicted RBP14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 RAD51AP1Q96B01 352 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 MARK4Q96L34 752 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 NMUR1Q9HB89 426 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 CCDC177Q9NQR7 707 aaPredicted RBP14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 GRHL1Q9NZI5 618 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 NUP188Q5SRE5 1749 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 A0A0J9YYE9 177 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 ENO4A6NNW6 628 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 H0Y858 1186 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 SMNDC1O75940 238 aaKnown RBP eCLIP14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 MED26O95402 600 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 CCL5P13501 91 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 EDNRBP24530 442 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 CMPK1P30085 196 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 HSD17B2P37059 387 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 USP4Q13107 963 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 CARD16Q5EG05 197 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 FSTL4Q6MZW2 842 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 GALNT18Q6P9A2 607 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 OFCC1Q8IZS5 231 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 SCAMP5Q8TAC9 235 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 TLCD1Q96CP7 247 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 POLR1BQ9H9Y6 1135 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 ATP6V1HQ9UI12 483 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 CNTN6Q9UQ52 1028 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 HEBP2Q9Y5Z4 205 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 SUV39H1O43463 412 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 TRBC1P01850 177 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 NOVP48745 357 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 MLLT6P55198 1093 aaPredicted RBP14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 CLCQ05315 142 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 FSTL1Q12841 308 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 GRSF1Q12849 480 aaKnown RBP eCLIP14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 UBAP2LQ14157 1087 aaKnown RBP14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 TCEAL1Q15170 157 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 TIGD2Q4W5G0 525 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 SCIMPQ6UWF3 145 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 OR14C36Q8NHC7 312 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 HERVK_113Q902F9 699 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 MTERF3Q96E29 417 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 TNKS2Q9H2K2 1166 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 IPPKQ9H8X2 491 aa14.34□□□□□ -0.11
PPARGC1B-203ENST00000394320 GPM6BQ13491 265 aa14.33□□□□□ -0.11
PPARGC1B-203ENST00000394320 SNX20Q7Z614 316 aa14.33□□□□□ -0.11
PPARGC1B-203ENST00000394320 CYP4X1Q8N118 509 aa14.33□□□□□ -0.11
PPARGC1B-203ENST00000394320 OR2T12Q8NG77 320 aa14.33□□□□□ -0.11
PPARGC1B-203ENST00000394320 SH3RF2Q8TEC5 729 aa14.33□□□□□ -0.11
PPARGC1B-203ENST00000394320 FCF1Q9Y324 198 aaKnown RBP14.33□□□□□ -0.11
PPARGC1B-203ENST00000394320 HMGB3O15347 200 aaKnown RBP14.33□□□□□ -0.12
PPARGC1B-203ENST00000394320 SERPINI2O75830 405 aa14.33□□□□□ -0.12
PPARGC1B-203ENST00000394320 PIAS1O75925 651 aa14.33□□□□□ -0.12
PPARGC1B-203ENST00000394320 MT-CYBP00156 380 aaPredicted RBP14.33□□□□□ -0.12
PPARGC1B-203ENST00000394320 MPSTP25325 297 aa14.33□□□□□ -0.12
PPARGC1B-203ENST00000394320 CDH5P33151 784 aaPredicted RBP14.33□□□□□ -0.12
PPARGC1B-203ENST00000394320 MPP1Q00013 466 aa14.33□□□□□ -0.12
PPARGC1B-203ENST00000394320 MED27Q6P2C8 311 aa14.33□□□□□ -0.12
PPARGC1B-203ENST00000394320 FAM92BQ6ZTR7 304 aa14.33□□□□□ -0.12
PPARGC1B-203ENST00000394320 VMP1Q96GC9 406 aa14.33□□□□□ -0.12
PPARGC1B-203ENST00000394320 RNF39Q9H2S5 420 aa14.33□□□□□ -0.12
PPARGC1B-203ENST00000394320 CLN6Q9NWW5 311 aa14.33□□□□□ -0.12
PPARGC1B-203ENST00000394320 HMGXB4Q9UGU5 601 aa14.33□□□□□ -0.12
PPARGC1B-203ENST00000394320 SMIM31A0A1B0GVY4 71 aa14.33□□□□□ -0.12
PPARGC1B-203ENST00000394320 TSPAN19P0C672 248 aa14.33□□□□□ -0.12
PPARGC1B-203ENST00000394320 DNAJB1P25685 340 aa14.33□□□□□ -0.12
PPARGC1B-203ENST00000394320 NMBRP28336 390 aa14.33□□□□□ -0.12
PPARGC1B-203ENST00000394320 UGT2B15P54855 530 aa14.33□□□□□ -0.12
PPARGC1B-203ENST00000394320 MANFP55145 182 aaKnown RBP14.33□□□□□ -0.12
PPARGC1B-203ENST00000394320 CA9Q16790 459 aa14.33□□□□□ -0.12
PPARGC1B-203ENST00000394320 MACC1Q6ZN28 852 aa14.33□□□□□ -0.12
PPARGC1B-203ENST00000394320 CEP68Q76N32 757 aa14.33□□□□□ -0.12
PPARGC1B-203ENST00000394320 CTU1Q7Z7A3 348 aaKnown RBP14.33□□□□□ -0.12
PPARGC1B-203ENST00000394320 SAMD14Q8IZD0 417 aaPredicted RBP14.33□□□□□ -0.12
PPARGC1B-203ENST00000394320 KLHL23Q8NBE8 558 aa14.33□□□□□ -0.12
PPARGC1B-203ENST00000394320 OR10G6Q8NH81 332 aa14.33□□□□□ -0.12
PPARGC1B-203ENST00000394320 TWIST2Q8WVJ9 160 aa14.33□□□□□ -0.12
PPARGC1B-203ENST00000394320 GSTK1Q9Y2Q3 226 aa14.33□□□□□ -0.12
PPARGC1B-203ENST00000394320 hCG_2014768A0A024R1R8 64 aa14.32□□□□□ -0.12
PPARGC1B-203ENST00000394320 SLC22A2O15244 555 aa14.32□□□□□ -0.12
PPARGC1B-203ENST00000394320 SLC7A2P52569 658 aa14.32□□□□□ -0.12
PPARGC1B-203ENST00000394320 NAE1Q13564 534 aa14.32□□□□□ -0.12
PPARGC1B-203ENST00000394320 SF1Q15637 639 aaKnown RBP14.32□□□□□ -0.12
PPARGC1B-203ENST00000394320 SLC1A5Q15758 541 aa14.32□□□□□ -0.12
PPARGC1B-203ENST00000394320 OLFML1Q6UWY5 402 aa14.32□□□□□ -0.12
PPARGC1B-203ENST00000394320 FGD2Q7Z6J4 655 aa14.32□□□□□ -0.12
PPARGC1B-203ENST00000394320 TMPRSS11BQ86T26 416 aa14.32□□□□□ -0.12
PPARGC1B-203ENST00000394320 TFB2MQ9H5Q4 396 aaKnown RBP14.32□□□□□ -0.12
PPARGC1B-203ENST00000394320 CCNB1IP1Q9NPC3 277 aa14.32□□□□□ -0.12
PPARGC1B-203ENST00000394320 FKBPLQ9UIM3 349 aa14.32□□□□□ -0.12
PPARGC1B-203ENST00000394320 C10orf71Q711Q0 1435 aa14.32□□□□□ -0.12
PPARGC1B-203ENST00000394320 CENPXA8MT69 81 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms