RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 ZDHHC1Q8WTX9 485 aa11.28□□□□□ -0.6
IGHV4-28-201ENST00000390612 GLYATL1Q969I3 302 aa11.28□□□□□ -0.6
IGHV4-28-201ENST00000390612 RTP4Q96DX8 246 aa11.28□□□□□ -0.6
IGHV4-28-201ENST00000390612 PRR11Q96HE9 360 aaPredicted RBP11.28□□□□□ -0.6
IGHV4-28-201ENST00000390612 VPS35Q96QK1 796 aa11.28□□□□□ -0.6
IGHV4-28-201ENST00000390612 FERMT1Q9BQL6 677 aa11.28□□□□□ -0.6
IGHV4-28-201ENST00000390612 SPATA16Q9BXB7 569 aa11.28□□□□□ -0.6
IGHV4-28-201ENST00000390612 LRRN3Q9H3W5 708 aa11.28□□□□□ -0.6
IGHV4-28-201ENST00000390612 DPEP2Q9H4A9 486 aa11.28□□□□□ -0.6
IGHV4-28-201ENST00000390612 IL26Q9NPH9 171 aa11.28□□□□□ -0.6
IGHV4-28-201ENST00000390612 ATXN10Q9UBB4 475 aa11.28□□□□□ -0.6
IGHV4-28-201ENST00000390612 AAR2Q9Y312 384 aaKnown RBP11.28□□□□□ -0.6
IGHV4-28-201ENST00000390612 ATMQ13315 3056 aa11.27□□□□□ -0.6
IGHV4-28-201ENST00000390612 A6NCN8 305 aa11.27□□□□□ -0.61
IGHV4-28-201ENST00000390612 GOLGA6L9A6NEM1 432 aa11.27□□□□□ -0.61
IGHV4-28-201ENST00000390612 B4DGG1 531 aa11.27□□□□□ -0.61
IGHV4-28-201ENST00000390612 B4GAT1O43505 415 aa11.27□□□□□ -0.61
IGHV4-28-201ENST00000390612 PPFIA2O75334 1257 aa11.27□□□□□ -0.61
IGHV4-28-201ENST00000390612 ASMTLO95671 621 aa11.27□□□□□ -0.61
IGHV4-28-201ENST00000390612 ECEL1O95672 775 aa11.27□□□□□ -0.61
IGHV4-28-201ENST00000390612 EML2O95834 649 aa11.27□□□□□ -0.61
IGHV4-28-201ENST00000390612 ZNF8P17098 575 aaPredicted RBP11.27□□□□□ -0.61
IGHV4-28-201ENST00000390612 MAZP56270 477 aaKnown RBP11.27□□□□□ -0.61
IGHV4-28-201ENST00000390612 SQSTM1Q13501 440 aa11.27□□□□□ -0.61
IGHV4-28-201ENST00000390612 OLIG2Q13516 323 aa11.27□□□□□ -0.61
IGHV4-28-201ENST00000390612 PEX6Q13608 980 aa11.27□□□□□ -0.61
IGHV4-28-201ENST00000390612 OASLQ15646 514 aaKnown RBP11.27□□□□□ -0.61
IGHV4-28-201ENST00000390612 PARP6Q2NL67 630 aa11.27□□□□□ -0.61
IGHV4-28-201ENST00000390612 ATP13A5Q4VNC0 1218 aa11.27□□□□□ -0.61
IGHV4-28-201ENST00000390612 KHDC1Q4VXA5 237 aaKnown RBP11.27□□□□□ -0.61
IGHV4-28-201ENST00000390612 ZNF569Q5MCW4 686 aa11.27□□□□□ -0.61
IGHV4-28-201ENST00000390612 ZDHHC20Q5W0Z9 365 aa11.27□□□□□ -0.61
IGHV4-28-201ENST00000390612 ALS2CLQ60I27 953 aa11.27□□□□□ -0.61
IGHV4-28-201ENST00000390612 SLC30A9Q6PML9 568 aa11.27□□□□□ -0.61
IGHV4-28-201ENST00000390612 MARK2Q7KZI7 788 aaKnown RBP11.27□□□□□ -0.61
IGHV4-28-201ENST00000390612 SPRED1Q7Z699 444 aa11.27□□□□□ -0.61
IGHV4-28-201ENST00000390612 ADGRG6Q86SQ4 1221 aa11.27□□□□□ -0.61
IGHV4-28-201ENST00000390612 GALNT13Q8IUC8 556 aa11.27□□□□□ -0.61
IGHV4-28-201ENST00000390612 CCNJLQ8IV13 435 aa11.27□□□□□ -0.61
IGHV4-28-201ENST00000390612 FAM71DQ8N9W8 422 aa11.27□□□□□ -0.61
IGHV4-28-201ENST00000390612 PATE1Q8WXA2 126 aa11.27□□□□□ -0.61
IGHV4-28-201ENST00000390612 PPP1R2P1Q96PQ5 205 aa11.27□□□□□ -0.61
IGHV4-28-201ENST00000390612 C19orf43Q9BQ61 176 aa11.27□□□□□ -0.61
IGHV4-28-201ENST00000390612 FICDQ9BVA6 458 aa11.27□□□□□ -0.61
IGHV4-28-201ENST00000390612 SUDS3Q9H7L9 328 aaPredicted RBP11.27□□□□□ -0.61
IGHV4-28-201ENST00000390612 BPIFA1Q9NP55 256 aa11.27□□□□□ -0.61
IGHV4-28-201ENST00000390612 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.27□□□□□ -0.61
IGHV4-28-201ENST00000390612 LRIT1Q9P2V4 623 aa11.27□□□□□ -0.61
IGHV4-28-201ENST00000390612 GPSM3Q9Y4H4 160 aa11.27□□□□□ -0.61
IGHV4-28-201ENST00000390612 CACNA1GO43497 2377 aa11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 A0A087WV48 116 aa11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 D6RAR5 112 aa11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 PPM1DO15297 605 aa11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 GRID2O43424 1007 aa11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 TLX3O43711 291 aaPredicted RBP11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 VEGFDO43915 354 aa11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 BRINP1O60477 761 aa11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 USP12O75317 370 aa11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 STK10O94804 968 aaKnown RBP11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 SLC25A14O95258 325 aaPredicted RBP11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 METTL18O95568 372 aa11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 CCDC175P0C221 793 aa11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 CA5AP35218 305 aa11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 ACTR1BP42025 376 aa11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 GPR3P46089 330 aa11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 FASLGP48023 281 aa11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 GDF10P55107 478 aa11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 ACTR1AP61163 376 aa11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 ZFP36L1Q07352 338 aaKnown RBP11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 SPIDRQ14159 915 aa11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 SIX1Q15475 284 aaPredicted RBP11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 TAF1AQ15573 450 aaPredicted RBP11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 ZNF648Q5T619 568 aaPredicted RBP11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 SLC13A5Q86YT5 568 aaPredicted RBP11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 ZNF547Q8IVP9 402 aa11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 SFRP1Q8N474 314 aa11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 SNIP1Q8TAD8 396 aaKnown RBP11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 BRSK1Q8TDC3 778 aa11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 BLOC1S5Q8TDH9 187 aa11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 ATXN7L3BQ96GX2 97 aa11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 FSD1LQ9BXM9 530 aa11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 TLR10Q9BXR5 811 aa11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 FRMD8P1Q9BZ68 369 aaPredicted RBP11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 OR2AG1Q9H205 316 aa11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 POLR1BQ9H9Y6 1135 aa11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 ARFGAP3Q9NP61 516 aa11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 ASCL3Q9NQ33 180 aa11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 TBC1D29Q9UFV1 150 aa11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 SLC23A2Q9UGH3 650 aa11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 ZNHIT2Q9UHR6 403 aa11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 FEZ2Q9UHY8 353 aaPredicted RBP11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 RAXQ9Y2V3 346 aa11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 PRKAB1Q9Y478 270 aa11.26□□□□□ -0.61
IGHV4-28-201ENST00000390612 AGAP14A8MT82 685 aa11.25□□□□□ -0.61
IGHV4-28-201ENST00000390612 LIASO43766 372 aa11.25□□□□□ -0.61
IGHV4-28-201ENST00000390612 SLC4A1P02730 911 aa11.25□□□□□ -0.61
IGHV4-28-201ENST00000390612 RPLP0P05388 317 aaKnown RBP11.25□□□□□ -0.61
IGHV4-28-201ENST00000390612 LPOP22079 712 aaPredicted RBP11.25□□□□□ -0.61
IGHV4-28-201ENST00000390612 PSMA3P25788 255 aa11.25□□□□□ -0.61
IGHV4-28-201ENST00000390612 STIP1P31948 543 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms