RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 ARF5P84085 180 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 PTPRNQ16849 979 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 METTL11BQ5VVY1 283 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 AFMIDQ63HM1 303 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 CCDC117Q8IWD4 279 aaPredicted RBP10.76□□□□□ -0.69
NEDD9-201ENST00000379433 CLDN19Q8N6F1 224 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 OR4L1Q8NH43 312 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 BADQ92934 168 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 BTBD10Q9BSF8 475 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 HERC2P3Q9BVR0 1158 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 MTG2Q9H4K7 406 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 CATSPERZQ9NTU4 200 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 GALPQ9UBC7 116 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 ZNF212Q9UDV6 495 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 SLC4A7Q9Y6M7 1214 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 DRGXA6NNA5 263 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 MGRN1O60291 552 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 NIPSNAP2O75323 286 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 TSPAN9O75954 239 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 SBK3P0C264 359 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 UGT1A6P19224 532 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 UGT1A1P22309 533 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 UGT1A4P22310 534 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 CTNNB1P35222 781 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 UGT1A3P35503 534 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 UGT1A5P35504 534 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 LBX1P52954 281 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 KHDC1Q4VXA5 237 aaKnown RBP10.76□□□□□ -0.69
NEDD9-201ENST00000379433 WDR45BQ5MNZ6 344 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 TMEM207Q6UWW9 146 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 CYS1Q717R9 158 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 TMEM150AQ86TG1 271 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 PIANPQ8IYJ0 282 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 SPERTQ8NA61 448 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 C2CD4AQ8NCU7 369 aaPredicted RBP10.76□□□□□ -0.69
NEDD9-201ENST00000379433 SLC22A8Q8TCC7 542 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 USP13Q92995 863 aaPredicted RBP10.76□□□□□ -0.69
NEDD9-201ENST00000379433 C11orf49Q9H6J7 331 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 VPS45Q9NRW7 570 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 IL37Q9NZH6 218 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 VPS51Q9UID3 782 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 HCFC2Q9Y5Z7 792 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 MIA3Q5JRA6 1907 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 HTR3EA5X5Y0 456 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 NEDD8-MDP1E9PL57 170 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 UBXN8O00124 270 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 GSC2O15499 205 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 TMCC2O75069 709 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 KRT36O76013 467 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 IGLV3-27P01718 113 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 CXCL10P02778 98 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 ZDHHC11BP0C7U3 371 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 KPNA1P52294 538 aaPredicted RBP10.76□□□□□ -0.69
NEDD9-201ENST00000379433 YBEYP58557 167 aaPredicted RBP10.76□□□□□ -0.69
NEDD9-201ENST00000379433 DSG1Q02413 1049 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 RING1Q06587 406 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 TRAF2Q12933 501 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 KIAA0930Q6ICG6 404 aaPredicted RBP10.76□□□□□ -0.69
NEDD9-201ENST00000379433 PSAPL1Q6NUJ1 521 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 KLC3Q6P597 504 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 LURAP1LQ8IV03 231 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 FIBCD1Q8N539 461 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 PBXIP1Q96AQ6 731 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 CDKN2AIPNLQ96HQ2 116 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 FEM1AQ9BSK4 669 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 LRMDAQ9H2I8 198 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 ABCB8Q9NUT2 735 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 POLR3BQ9NW08 1133 aaPredicted RBP10.76□□□□□ -0.69
NEDD9-201ENST00000379433 OXSMQ9NWU1 459 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 CDH22Q9UJ99 828 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 SUPT3HB4E1H0 165 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 E5RI56 91 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 ANP32DO95626 131 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 GRK2P25098 689 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 MC4RP32245 332 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 MAPKAPK2P49137 400 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 CREB5Q02930 508 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 CYTH1Q15438 398 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 PPP1R3AQ16821 1122 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 C1orf146Q5VVC0 180 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 LIPMQ5VYY2 423 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 SEL1L3Q68CR1 1132 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 ZNF600Q6ZNG1 722 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 AADATQ8N5Z0 425 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 STMN2Q93045 179 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 NSUN5Q96P11 429 aaKnown RBP10.75□□□□□ -0.69
NEDD9-201ENST00000379433 PRKD2Q9BZL6 878 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 TRIM8Q9BZR9 551 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 MAGEH1Q9H213 219 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 LINC00597Q9H2U6 94 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 TNFRSF12AQ9NP84 129 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 DOCK4Q8N1I0 1966 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 TLL1O43897 1013 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 ABLIM3O94929 683 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 NDST3O95803 873 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 GUCA1CO95843 209 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 S1PR4O95977 384 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 CALB2P22676 271 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 CD70P32970 193 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 PRMT2P55345 433 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms