RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 TRIM39Q9HCM9 518 aa19.72■□□□□ 0.75
DDR1-228ENST00000376575 MRPL40Q9NQ50 206 aaKnown RBP19.72■□□□□ 0.75
DDR1-228ENST00000376575 SYBUQ9NX95 663 aa19.72■□□□□ 0.75
DDR1-228ENST00000376575 SLC2A6Q9UGQ3 507 aa19.72■□□□□ 0.75
DDR1-228ENST00000376575 SOX13Q9UN79 622 aa19.72■□□□□ 0.75
DDR1-228ENST00000376575 CSNK1G3Q9Y6M4 447 aa19.72■□□□□ 0.75
DDR1-228ENST00000376575 SDR42E2A6NKP2 422 aa19.71■□□□□ 0.75
DDR1-228ENST00000376575 GPR89AB7ZAQ6 455 aa19.71■□□□□ 0.75
DDR1-228ENST00000376575 H3BM21 787 aa19.71■□□□□ 0.75
DDR1-228ENST00000376575 GOLGA8MH3BSY2 632 aa19.71■□□□□ 0.75
DDR1-228ENST00000376575 CCL22O00626 93 aa19.71■□□□□ 0.75
DDR1-228ENST00000376575 GPR39O43194 453 aa19.71■□□□□ 0.75
DDR1-228ENST00000376575 SLC25A14O95258 325 aaPredicted RBP19.71■□□□□ 0.75
DDR1-228ENST00000376575 GPR89BP0CG08 455 aa19.71■□□□□ 0.75
DDR1-228ENST00000376575 POLD2P49005 469 aa19.71■□□□□ 0.75
DDR1-228ENST00000376575 DRG2P55039 364 aaKnown RBP19.71■□□□□ 0.75
DDR1-228ENST00000376575 TMPRSS15P98073 1019 aa19.71■□□□□ 0.75
DDR1-228ENST00000376575 IL9RQ01113 521 aa19.71■□□□□ 0.75
DDR1-228ENST00000376575 KHDC1Q4VXA5 237 aaKnown RBP19.71■□□□□ 0.75
DDR1-228ENST00000376575 SNX20Q7Z614 316 aa19.71■□□□□ 0.75
DDR1-228ENST00000376575 ADGRG6Q86SQ4 1221 aa19.71■□□□□ 0.75
DDR1-228ENST00000376575 PHYKPLQ8IUZ5 450 aa19.71■□□□□ 0.75
DDR1-228ENST00000376575 RBFAQ8N0V3 343 aa19.71■□□□□ 0.75
DDR1-228ENST00000376575 MPP5Q8N3R9 675 aa19.71■□□□□ 0.75
DDR1-228ENST00000376575 DDHD1Q8NEL9 900 aa19.71■□□□□ 0.75
DDR1-228ENST00000376575 SEC14L1Q92503 715 aa19.71■□□□□ 0.75
DDR1-228ENST00000376575 LRRC61Q9BV99 259 aa19.71■□□□□ 0.75
DDR1-228ENST00000376575 SUDS3Q9H7L9 328 aaPredicted RBP19.71■□□□□ 0.75
DDR1-228ENST00000376575 RMI1Q9H9A7 625 aa19.71■□□□□ 0.75
DDR1-228ENST00000376575 L2HGDHQ9H9P8 463 aa19.71■□□□□ 0.75
DDR1-228ENST00000376575 UCKL1Q9NWZ5 548 aa19.71■□□□□ 0.75
DDR1-228ENST00000376575 WHRNQ9P202 907 aa19.71■□□□□ 0.75
DDR1-228ENST00000376575 ATXN10Q9UBB4 475 aa19.71■□□□□ 0.75
DDR1-228ENST00000376575 TMEM98Q9Y2Y6 226 aa19.71■□□□□ 0.75
DDR1-228ENST00000376575 MAGEB16A2A368 324 aa19.7■□□□□ 0.74
DDR1-228ENST00000376575 ESPNB1AK53 854 aa19.7■□□□□ 0.74
DDR1-228ENST00000376575 CHUKO15111 745 aa19.7■□□□□ 0.74
DDR1-228ENST00000376575 NUAK1O60285 661 aa19.7■□□□□ 0.74
DDR1-228ENST00000376575 CBFA2T3O75081 653 aa19.7■□□□□ 0.74
DDR1-228ENST00000376575 TNFP01375 233 aa19.7■□□□□ 0.74
DDR1-228ENST00000376575 MC4RP32245 332 aa19.7■□□□□ 0.74
DDR1-228ENST00000376575 ITGA8P53708 1063 aa19.7■□□□□ 0.74
DDR1-228ENST00000376575 SUZ12Q15022 739 aaKnown RBP19.7■□□□□ 0.74
DDR1-228ENST00000376575 GPR33Q49SQ1 333 aa19.7■□□□□ 0.74
DDR1-228ENST00000376575 PYCR3Q53H96 274 aa19.7■□□□□ 0.74
DDR1-228ENST00000376575 TMEM135Q86UB9 458 aa19.7■□□□□ 0.74
DDR1-228ENST00000376575 HID1Q8IV36 788 aa19.7■□□□□ 0.74
DDR1-228ENST00000376575 SDR16C5Q8N3Y7 309 aa19.7■□□□□ 0.74
DDR1-228ENST00000376575 ZNF548Q8NEK5 533 aaPredicted RBP19.7■□□□□ 0.74
DDR1-228ENST00000376575 SLC13A1Q9BZW2 595 aa19.7■□□□□ 0.74
DDR1-228ENST00000376575 CLPBQ9H078 707 aa19.7■□□□□ 0.74
DDR1-228ENST00000376575 ASB8Q9H765 288 aa19.7■□□□□ 0.74
DDR1-228ENST00000376575 TRNAU1APQ9NX07 287 aaKnown RBP19.7■□□□□ 0.74
DDR1-228ENST00000376575 DLL3Q9NYJ7 618 aa19.7■□□□□ 0.74
DDR1-228ENST00000376575 GRHL1Q9NZI5 618 aa19.7■□□□□ 0.74
DDR1-228ENST00000376575 APOBEC3BQ9UH17 382 aaKnown RBP19.7■□□□□ 0.74
DDR1-228ENST00000376575 SUFUQ9UMX1 484 aa19.7■□□□□ 0.74
DDR1-228ENST00000376575 SNX24Q9Y343 169 aa19.7■□□□□ 0.74
DDR1-228ENST00000376575 PCYT1BQ9Y5K3 369 aaPredicted RBP19.7■□□□□ 0.74
DDR1-228ENST00000376575 COL5A1P20908 1838 aaPredicted RBP19.69■□□□□ 0.74
DDR1-228ENST00000376575 CCDC162PA2VCL2 907 aa19.69■□□□□ 0.74
DDR1-228ENST00000376575 CTAGE15A4D2H0 777 aa19.69■□□□□ 0.74
DDR1-228ENST00000376575 NDC80O14777 642 aa19.69■□□□□ 0.74
DDR1-228ENST00000376575 SCAMP1O15126 338 aa19.69■□□□□ 0.74
DDR1-228ENST00000376575 FLRT2O43155 660 aa19.69■□□□□ 0.74
DDR1-228ENST00000376575 VEGFDO43915 354 aa19.69■□□□□ 0.74
DDR1-228ENST00000376575 CTAGE8P0CG41 777 aa19.69■□□□□ 0.74
DDR1-228ENST00000376575 SDHBP21912 280 aa19.69■□□□□ 0.74
DDR1-228ENST00000376575 ARNTP27540 789 aa19.69■□□□□ 0.74
DDR1-228ENST00000376575 NMBRP28336 390 aa19.69■□□□□ 0.74
DDR1-228ENST00000376575 FOXN2P32314 431 aa19.69■□□□□ 0.74
DDR1-228ENST00000376575 RSPO4Q2I0M5 234 aaPredicted RBP19.69■□□□□ 0.74
DDR1-228ENST00000376575 UAP1L1Q3KQV9 507 aa19.69■□□□□ 0.74
DDR1-228ENST00000376575 LDLRAP1Q5SW96 308 aa19.69■□□□□ 0.74
DDR1-228ENST00000376575 FNBP1LQ5T0N5 605 aa19.69■□□□□ 0.74
DDR1-228ENST00000376575 GPRC6AQ5T6X5 926 aa19.69■□□□□ 0.74
DDR1-228ENST00000376575 MICALCLQ6ZW33 695 aa19.69■□□□□ 0.74
DDR1-228ENST00000376575 CTAGE6Q86UF2 777 aa19.69■□□□□ 0.74
DDR1-228ENST00000376575 GATAD2AQ86YP4 633 aa19.69■□□□□ 0.74
DDR1-228ENST00000376575 CTAGE4Q8IX94 777 aa19.69■□□□□ 0.74
DDR1-228ENST00000376575 CEP112Q8N8E3 955 aa19.69■□□□□ 0.74
DDR1-228ENST00000376575 NOA1Q8NC60 698 aaKnown RBP19.69■□□□□ 0.74
DDR1-228ENST00000376575 BBOF1Q8ND07 529 aa19.69■□□□□ 0.74
DDR1-228ENST00000376575 BAHD1Q8TBE0 780 aaPredicted RBP19.69■□□□□ 0.74
DDR1-228ENST00000376575 HDAC10Q969S8 669 aa19.69■□□□□ 0.74
DDR1-228ENST00000376575 MFSD3Q96ES6 412 aa19.69■□□□□ 0.74
DDR1-228ENST00000376575 LRRC1Q9BTT6 524 aa19.69■□□□□ 0.74
DDR1-228ENST00000376575 TRIM31Q9BZY9 425 aa19.69■□□□□ 0.74
DDR1-228ENST00000376575 CYP4F12Q9HCS2 524 aa19.69■□□□□ 0.74
DDR1-228ENST00000376575 SPASTQ9UBP0 616 aa19.69■□□□□ 0.74
DDR1-228ENST00000376575 ST14Q9Y5Y6 855 aa19.69■□□□□ 0.74
DDR1-228ENST00000376575 CNOT1A5YKK6 2376 aaKnown RBP19.69■□□□□ 0.74
DDR1-228ENST00000376575 IGLV3-16A0A075B6K0 115 aa19.68■□□□□ 0.74
DDR1-228ENST00000376575 FAM237BA0A1B0GVD1 139 aa19.68■□□□□ 0.74
DDR1-228ENST00000376575 CCDC78A2IDD5 438 aa19.68■□□□□ 0.74
DDR1-228ENST00000376575 LMO7DNF2Z398 122 aa19.68■□□□□ 0.74
DDR1-228ENST00000376575 TPP1O14773 563 aa19.68■□□□□ 0.74
DDR1-228ENST00000376575 AQP9O43315 295 aa19.68■□□□□ 0.74
DDR1-228ENST00000376575 SDC3O75056 442 aa19.68■□□□□ 0.74
DDR1-228ENST00000376575 ZNF8P17098 575 aaPredicted RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms