RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 F8W8V4 182 aa13.64□□□□□ -0.23
SSR4-202ENST00000370085 GOLGA8MH3BSY2 632 aa13.64□□□□□ -0.23
SSR4-202ENST00000370085 SCAMP1O15126 338 aa13.64□□□□□ -0.23
SSR4-202ENST00000370085 SDC3O75056 442 aa13.64□□□□□ -0.23
SSR4-202ENST00000370085 CEACAM5P06731 702 aa13.64□□□□□ -0.23
SSR4-202ENST00000370085 ANXA6P08133 673 aa13.64□□□□□ -0.23
SSR4-202ENST00000370085 MSH3P20585 1137 aa13.64□□□□□ -0.23
SSR4-202ENST00000370085 MGAT1P26572 445 aa13.64□□□□□ -0.23
SSR4-202ENST00000370085 AKT1P31749 480 aa13.64□□□□□ -0.23
SSR4-202ENST00000370085 MC4RP32245 332 aa13.64□□□□□ -0.23
SSR4-202ENST00000370085 CACNG1Q06432 222 aa13.64□□□□□ -0.23
SSR4-202ENST00000370085 BNIP3Q12983 259 aa13.64□□□□□ -0.23
SSR4-202ENST00000370085 NFATC2Q13469 925 aa13.64□□□□□ -0.23
SSR4-202ENST00000370085 LRP8Q14114 963 aa13.64□□□□□ -0.23
SSR4-202ENST00000370085 PUM1Q14671 1186 aaKnown RBP eCLIP13.64□□□□□ -0.23
SSR4-202ENST00000370085 ZRANB3Q5FWF4 1079 aa13.64□□□□□ -0.23
SSR4-202ENST00000370085 AARS2Q5JTZ9 985 aaKnown RBP13.64□□□□□ -0.23
SSR4-202ENST00000370085 TPRG1LQ5T0D9 272 aa13.64□□□□□ -0.23
SSR4-202ENST00000370085 TSTD2Q5T7W7 516 aa13.64□□□□□ -0.23
SSR4-202ENST00000370085 RNASEH2BQ5TBB1 312 aaKnown RBP13.64□□□□□ -0.23
SSR4-202ENST00000370085 LYPLAL1Q5VWZ2 237 aa13.64□□□□□ -0.23
SSR4-202ENST00000370085 C8orf74Q6P047 294 aa13.64□□□□□ -0.23
SSR4-202ENST00000370085 AFTPHQ6ULP2 937 aa13.64□□□□□ -0.23
SSR4-202ENST00000370085 PDIK1LQ8N165 341 aa13.64□□□□□ -0.23
SSR4-202ENST00000370085 NAT8LQ8N9F0 302 aa13.64□□□□□ -0.23
SSR4-202ENST00000370085 ZNF548Q8NEK5 533 aaPredicted RBP13.64□□□□□ -0.23
SSR4-202ENST00000370085 GABPB2Q8TAK5 448 aaPredicted RBP13.64□□□□□ -0.23
SSR4-202ENST00000370085 OR1E3Q8WZA6 343 aa13.64□□□□□ -0.23
SSR4-202ENST00000370085 PDXPQ96GD0 296 aa13.64□□□□□ -0.23
SSR4-202ENST00000370085 CDKN2AIPNLQ96HQ2 116 aa13.64□□□□□ -0.23
SSR4-202ENST00000370085 ZNF514Q96K75 400 aaPredicted RBP13.64□□□□□ -0.23
SSR4-202ENST00000370085 SERPINB12Q96P63 405 aa13.64□□□□□ -0.23
SSR4-202ENST00000370085 ERP44Q9BS26 406 aa13.64□□□□□ -0.23
SSR4-202ENST00000370085 GSDMCQ9BYG8 508 aa13.64□□□□□ -0.23
SSR4-202ENST00000370085 TRIM31Q9BZY9 425 aa13.64□□□□□ -0.23
SSR4-202ENST00000370085 FGF22Q9HCT0 170 aa13.64□□□□□ -0.23
SSR4-202ENST00000370085 TRNAU1APQ9NX07 287 aaKnown RBP13.64□□□□□ -0.23
SSR4-202ENST00000370085 NLGN3Q9NZ94 848 aa13.64□□□□□ -0.23
SSR4-202ENST00000370085 ZNHIT2Q9UHR6 403 aa13.64□□□□□ -0.23
SSR4-202ENST00000370085 SUFUQ9UMX1 484 aa13.64□□□□□ -0.23
SSR4-202ENST00000370085 GPSM3Q9Y4H4 160 aa13.64□□□□□ -0.23
SSR4-202ENST00000370085 KCTD3Q9Y597 815 aa13.64□□□□□ -0.23
SSR4-202ENST00000370085 DMXL1Q9Y485 3027 aa13.64□□□□□ -0.23
SSR4-202ENST00000370085 SPTBN4Q9H254 2564 aa13.64□□□□□ -0.23
SSR4-202ENST00000370085 MYLKQ15746 1914 aa13.63□□□□□ -0.23
SSR4-202ENST00000370085 TCRBV7S3A2A0A539 114 aa13.63□□□□□ -0.23
SSR4-202ENST00000370085 LMO7DNF2Z398 122 aa13.63□□□□□ -0.23
SSR4-202ENST00000370085 TPP1O14773 563 aa13.63□□□□□ -0.23
SSR4-202ENST00000370085 PFDN6O15212 129 aa13.63□□□□□ -0.23
SSR4-202ENST00000370085 TMEM63AO94886 807 aa13.63□□□□□ -0.23
SSR4-202ENST00000370085 CDK14O94921 469 aa13.63□□□□□ -0.23
SSR4-202ENST00000370085 CD59P13987 128 aa13.63□□□□□ -0.23
SSR4-202ENST00000370085 VCLP18206 1134 aa13.63□□□□□ -0.23
SSR4-202ENST00000370085 CSRP1P21291 193 aaKnown RBP13.63□□□□□ -0.23
SSR4-202ENST00000370085 GNPDA1P46926 289 aa13.63□□□□□ -0.23
SSR4-202ENST00000370085 PTPRCAPQ14761 206 aa13.63□□□□□ -0.23
SSR4-202ENST00000370085 SHBQ15464 509 aa13.63□□□□□ -0.23
SSR4-202ENST00000370085 ANKRD22Q5VYY1 191 aa13.63□□□□□ -0.23
SSR4-202ENST00000370085 LVRNQ6Q4G3 990 aa13.63□□□□□ -0.23
SSR4-202ENST00000370085 DBX2Q6ZNG2 339 aa13.63□□□□□ -0.23
SSR4-202ENST00000370085 MARK2Q7KZI7 788 aaKnown RBP13.63□□□□□ -0.23
SSR4-202ENST00000370085 TAS2R42Q7RTR8 314 aa13.63□□□□□ -0.23
SSR4-202ENST00000370085 TRIM74Q86UV6 250 aa13.63□□□□□ -0.23
SSR4-202ENST00000370085 GATAD2AQ86YP4 633 aa13.63□□□□□ -0.23
SSR4-202ENST00000370085 DDHD1Q8NEL9 900 aa13.63□□□□□ -0.23
SSR4-202ENST00000370085 OR6P1Q8NGX9 317 aa13.63□□□□□ -0.23
SSR4-202ENST00000370085 SCARF2Q96GP6 870 aaPredicted RBP13.63□□□□□ -0.23
SSR4-202ENST00000370085 OR2M4Q96R27 311 aa13.63□□□□□ -0.23
SSR4-202ENST00000370085 TRIM51Q9BSJ1 452 aa13.63□□□□□ -0.23
SSR4-202ENST00000370085 NAT9Q9BTE0 207 aa13.63□□□□□ -0.23
SSR4-202ENST00000370085 LRRC61Q9BV99 259 aa13.63□□□□□ -0.23
SSR4-202ENST00000370085 OR2AG1Q9H205 316 aa13.63□□□□□ -0.23
SSR4-202ENST00000370085 SUDS3Q9H7L9 328 aaPredicted RBP13.63□□□□□ -0.23
SSR4-202ENST00000370085 FTSJ1Q9UET6 329 aa13.63□□□□□ -0.23
SSR4-202ENST00000370085 CNOT6Q9ULM6 557 aaKnown RBP13.63□□□□□ -0.23
SSR4-202ENST00000370085 SOX13Q9UN79 622 aa13.63□□□□□ -0.23
SSR4-202ENST00000370085 TMEM98Q9Y2Y6 226 aa13.63□□□□□ -0.23
SSR4-202ENST00000370085 CNOT1A5YKK6 2376 aaKnown RBP13.63□□□□□ -0.23
SSR4-202ENST00000370085 CCDC78A2IDD5 438 aa13.62□□□□□ -0.23
SSR4-202ENST00000370085 KLHL33A6NCF5 533 aa13.62□□□□□ -0.23
SSR4-202ENST00000370085 KMOO15229 486 aa13.62□□□□□ -0.23
SSR4-202ENST00000370085 GRID2O43424 1007 aa13.62□□□□□ -0.23
SSR4-202ENST00000370085 RAD51CO43502 376 aa13.62□□□□□ -0.23
SSR4-202ENST00000370085 SH3BP5O60239 455 aa13.62□□□□□ -0.23
SSR4-202ENST00000370085 NUAK1O60285 661 aa13.62□□□□□ -0.23
SSR4-202ENST00000370085 UGT1A9O60656 530 aa13.62□□□□□ -0.23
SSR4-202ENST00000370085 SEC31AO94979 1220 aaKnown RBP13.62□□□□□ -0.23
SSR4-202ENST00000370085 CEACAM1P13688 526 aa13.62□□□□□ -0.23
SSR4-202ENST00000370085 UGT1A6P19224 532 aa13.62□□□□□ -0.23
SSR4-202ENST00000370085 UGT1A1P22309 533 aa13.62□□□□□ -0.23
SSR4-202ENST00000370085 UGT1A4P22310 534 aa13.62□□□□□ -0.23
SSR4-202ENST00000370085 PSMA3P25788 255 aa13.62□□□□□ -0.23
SSR4-202ENST00000370085 UGT1A3P35503 534 aa13.62□□□□□ -0.23
SSR4-202ENST00000370085 UGT1A5P35504 534 aa13.62□□□□□ -0.23
SSR4-202ENST00000370085 ID4P47928 161 aa13.62□□□□□ -0.23
SSR4-202ENST00000370085 RPIAP49247 311 aa13.62□□□□□ -0.23
SSR4-202ENST00000370085 DUSP3P51452 185 aaPredicted RBP13.62□□□□□ -0.23
SSR4-202ENST00000370085 ARL4CP56559 192 aa13.62□□□□□ -0.23
SSR4-202ENST00000370085 XIAPP98170 497 aa13.62□□□□□ -0.23
SSR4-202ENST00000370085 CAV1Q03135 178 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms