RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 DKK3Q9UBP4 350 aa8.78□□□□□ -1
SNX27-201ENST00000368838 EGFL7Q9UHF1 273 aa8.78□□□□□ -1
SNX27-201ENST00000368838 FNDC3AQ9Y2H6 1198 aaKnown RBP8.78□□□□□ -1
SNX27-201ENST00000368838 NEUROG3Q9Y4Z2 214 aa8.78□□□□□ -1
SNX27-201ENST00000368838 ARID1BQ8NFD5 2236 aaPredicted RBP8.77□□□□□ -1.01
SNX27-201ENST00000368838 ITPR1Q14643 2758 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 A0A1B0GTW7 788 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 A0A1B0GVT2 93 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 TLDC2A0PJX2 215 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 HMX2A2RU54 273 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 FAM47DPA6NHR8 397 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 METTL12A8MUP2 240 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 BCAT2O15382 392 aaPredicted RBP8.77□□□□□ -1.01
SNX27-201ENST00000368838 SNAP91O60641 907 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 USP12O75317 370 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 RFPL1O75677 317 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 GJB3O75712 270 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 ZWINTO95229 277 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 PGLSO95336 258 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 POP4O95707 220 aaKnown RBP8.77□□□□□ -1.01
SNX27-201ENST00000368838 IL1BP01584 269 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 ATP5BP06576 529 aaKnown RBP8.77□□□□□ -1.01
SNX27-201ENST00000368838 DLDP09622 509 aaKnown RBP8.77□□□□□ -1.01
SNX27-201ENST00000368838 FTH1P19P0C7X4 201 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 DHRS4L1P0CG22 281 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 COL6A2P12110 1019 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 BRAFP15056 766 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 OGNP20774 298 aaKnown RBP8.77□□□□□ -1.01
SNX27-201ENST00000368838 ARNTP27540 789 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 SPRP35270 261 aaPredicted RBP8.77□□□□□ -1.01
SNX27-201ENST00000368838 NNMTP40261 264 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 LEPRP48357 1165 aaKnown RBP8.77□□□□□ -1.01
SNX27-201ENST00000368838 CSNK1EP49674 416 aaKnown RBP8.77□□□□□ -1.01
SNX27-201ENST00000368838 ADARP55265 1226 aaKnown RBP8.77□□□□□ -1.01
SNX27-201ENST00000368838 MAXP61244 160 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 RHOAP61586 193 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 ECT2LQ008S8 904 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 IL9RQ01113 521 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 RAD51Q06609 339 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 ENPP2Q13822 863 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 SPARCL1Q14515 664 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 ZDHHC20Q5W0Z9 365 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 MBLAC2Q68D91 279 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 KCTD16Q68DU8 428 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 CASC4Q6P4E1 433 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 PACS1Q6VY07 963 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 RABEPKQ7Z6M1 372 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 SLCO6A1Q86UG4 719 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 KCNMB4Q86W47 210 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 ZNF354CQ86Y25 554 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 CYP4X1Q8N118 509 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 NDUFAF2Q8N183 169 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 TAB3Q8N5C8 712 aaPredicted RBP8.77□□□□□ -1.01
SNX27-201ENST00000368838 BANPQ8N9N5 519 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 OR13J1Q8NGT2 312 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 PIH1D2Q8WWB5 315 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 DNASE2BQ8WZ79 361 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 ZNF669Q96BR6 464 aaPredicted RBP8.77□□□□□ -1.01
SNX27-201ENST00000368838 MFSD3Q96ES6 412 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 MRGPRX3Q96LB0 322 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 SMC6Q96SB8 1091 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 RBBP8Q99708 897 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 OSBPL1AQ9BXW6 950 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 VPS11Q9H270 941 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 RHOJQ9H4E5 214 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 CHRAC1Q9NRG0 131 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 NLE1Q9NVX2 485 aaPredicted RBP8.77□□□□□ -1.01
SNX27-201ENST00000368838 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.77□□□□□ -1.01
SNX27-201ENST00000368838 SUSD2Q9UGT4 822 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 SLC25A13Q9UJS0 675 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 MSRB2Q9Y3D2 182 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 PCDHB11Q9Y5F2 797 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 RAI2Q9Y5P3 530 aa8.77□□□□□ -1.01
SNX27-201ENST00000368838 ATRXP46100 2492 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 KNTC1P50748 2209 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 RGSL1A5PLK6 1076 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 AGAP14A8MT82 685 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 CXorf49A8MYA2 514 aaPredicted RBP8.76□□□□□ -1.01
SNX27-201ENST00000368838 UPK3BL1B0FP48 263 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 UPK3BL2E5RIL1 263 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 POC1B-GALNT4F8VUJ3 575 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 TAF4O00268 1085 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 FSBPO95073 299 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 GSTA1P08263 222 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 KRT15P19012 456 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 GLDCP23378 1020 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 NFKBIAP25963 317 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 SERPINA4P29622 427 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 CRHR1P34998 444 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 SLCO1A2P46721 670 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 RGRP47804 291 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 SCNN1BP51168 640 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 RPS14P62263 151 aaKnown RBP8.76□□□□□ -1.01
SNX27-201ENST00000368838 POLR2LP62875 67 aaKnown RBP8.76□□□□□ -1.01
SNX27-201ENST00000368838 TRAF2Q12933 501 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 CAMK2GQ13555 558 aaPredicted RBP8.76□□□□□ -1.01
SNX27-201ENST00000368838 TYSND1Q2T9J0 566 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 HLA-BQ31612 363 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 MYLK3Q32MK0 819 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 CARD16Q5EG05 197 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms