RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 EPS15L1Q9UBC2 864 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 FKBPLQ9UIM3 349 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 APPL1Q9UKG1 709 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 ZNF711Q9Y462 761 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 TRANK1O15050 2925 aa13.92□□□□□ -0.18
USF1-202ENST00000368020 TRAV19A0A0A6YYK7 116 aa13.92□□□□□ -0.18
USF1-202ENST00000368020 GIPC1O14908 333 aa13.92□□□□□ -0.18
USF1-202ENST00000368020 AZIN1O14977 448 aa13.92□□□□□ -0.18
USF1-202ENST00000368020 TGM5O43548 720 aa13.92□□□□□ -0.18
USF1-202ENST00000368020 GREM1O60565 184 aa13.92□□□□□ -0.18
USF1-202ENST00000368020 PDE5AO76074 875 aa13.92□□□□□ -0.18
USF1-202ENST00000368020 FGF19O95750 216 aa13.92□□□□□ -0.18
USF1-202ENST00000368020 CHEK2O96017 543 aa13.92□□□□□ -0.18
USF1-202ENST00000368020 MTHFD2P13995 350 aa13.92□□□□□ -0.18
USF1-202ENST00000368020 ME2P23368 584 aa13.92□□□□□ -0.18
USF1-202ENST00000368020 MZF1P28698 734 aaPredicted RBP13.92□□□□□ -0.18
USF1-202ENST00000368020 CSKP41240 450 aa13.92□□□□□ -0.18
USF1-202ENST00000368020 ABL2P42684 1182 aa13.92□□□□□ -0.18
USF1-202ENST00000368020 PTPN5P54829 565 aa13.92□□□□□ -0.18
USF1-202ENST00000368020 BCL2L1Q07817 233 aa13.92□□□□□ -0.18
USF1-202ENST00000368020 KLC1Q07866 573 aa13.92□□□□□ -0.18
USF1-202ENST00000368020 BLMHQ13867 455 aa13.92□□□□□ -0.18
USF1-202ENST00000368020 CCNIQ14094 377 aa13.92□□□□□ -0.18
USF1-202ENST00000368020 PTK2BQ14289 1009 aa13.92□□□□□ -0.18
USF1-202ENST00000368020 OR4D1Q15615 310 aa13.92□□□□□ -0.18
USF1-202ENST00000368020 PFKFB4Q16877 469 aa13.92□□□□□ -0.18
USF1-202ENST00000368020 GEN1Q17RS7 908 aa13.92□□□□□ -0.18
USF1-202ENST00000368020 MMEL1Q495T6 779 aa13.92□□□□□ -0.18
USF1-202ENST00000368020 KANK2Q63ZY3 851 aa13.92□□□□□ -0.18
USF1-202ENST00000368020 LARP4Q71RC2 724 aaKnown RBP eCLIP13.92□□□□□ -0.18
USF1-202ENST00000368020 KBTBD6Q86V97 674 aa13.92□□□□□ -0.18
USF1-202ENST00000368020 ZNF557Q8N988 423 aaPredicted RBP13.92□□□□□ -0.18
USF1-202ENST00000368020 ALG14Q96F25 216 aa13.92□□□□□ -0.18
USF1-202ENST00000368020 PDLIM5Q96HC4 596 aaKnown RBP13.92□□□□□ -0.18
USF1-202ENST00000368020 GPR21Q99679 349 aa13.92□□□□□ -0.18
USF1-202ENST00000368020 ZNF334Q9HCZ1 680 aaPredicted RBP13.92□□□□□ -0.18
USF1-202ENST00000368020 IL17CQ9P0M4 197 aa13.92□□□□□ -0.18
USF1-202ENST00000368020 C6orf203Q9P0P8 240 aaPredicted RBP13.92□□□□□ -0.18
USF1-202ENST00000368020 FAM50BQ9Y247 325 aa13.92□□□□□ -0.18
USF1-202ENST00000368020 FIS1Q9Y3D6 152 aa13.92□□□□□ -0.18
USF1-202ENST00000368020 PCDHB9Q9Y5E1 797 aa13.92□□□□□ -0.18
USF1-202ENST00000368020 WASF2Q9Y6W5 498 aa13.92□□□□□ -0.18
USF1-202ENST00000368020 BPTFQ12830 3046 aa13.92□□□□□ -0.18
USF1-202ENST00000368020 UBXN8O00124 270 aa13.91□□□□□ -0.18
USF1-202ENST00000368020 CLASP2O75122 1294 aaKnown RBP13.91□□□□□ -0.18
USF1-202ENST00000368020 BAG2O95816 211 aa13.91□□□□□ -0.18
USF1-202ENST00000368020 IGSF6O95976 241 aa13.91□□□□□ -0.18
USF1-202ENST00000368020 GLUD1P00367 558 aa13.91□□□□□ -0.18
USF1-202ENST00000368020 CYBBP04839 570 aa13.91□□□□□ -0.18
USF1-202ENST00000368020 CKMP06732 381 aa13.91□□□□□ -0.18
USF1-202ENST00000368020 SNRPB2P08579 225 aaKnown RBP13.91□□□□□ -0.18
USF1-202ENST00000368020 ZNF7P17097 686 aaPredicted RBP13.91□□□□□ -0.18
USF1-202ENST00000368020 RPS3P23396 243 aaKnown RBP eCLIP13.91□□□□□ -0.18
USF1-202ENST00000368020 GABRR2P28476 465 aa13.91□□□□□ -0.18
USF1-202ENST00000368020 CA8P35219 290 aa13.91□□□□□ -0.18
USF1-202ENST00000368020 IRS1P35568 1242 aa13.91□□□□□ -0.18
USF1-202ENST00000368020 KCNC1P48547 511 aa13.91□□□□□ -0.18
USF1-202ENST00000368020 FLOT2Q14254 428 aa13.91□□□□□ -0.18
USF1-202ENST00000368020 CRY1Q16526 586 aa13.91□□□□□ -0.18
USF1-202ENST00000368020 PPM1LQ5SGD2 360 aa13.91□□□□□ -0.18
USF1-202ENST00000368020 TRIM68Q6AZZ1 485 aa13.91□□□□□ -0.18
USF1-202ENST00000368020 LINGO4Q6UY18 593 aa13.91□□□□□ -0.18
USF1-202ENST00000368020 ADAMTS19Q8TE59 1207 aa13.91□□□□□ -0.18
USF1-202ENST00000368020 DDI1Q8WTU0 396 aa13.91□□□□□ -0.18
USF1-202ENST00000368020 EXT2Q93063 718 aa13.91□□□□□ -0.18
USF1-202ENST00000368020 WBP2Q969T9 261 aa13.91□□□□□ -0.18
USF1-202ENST00000368020 ROPN1LQ96C74 230 aa13.91□□□□□ -0.18
USF1-202ENST00000368020 NSMCE3Q96MG7 304 aa13.91□□□□□ -0.18
USF1-202ENST00000368020 CDRT15Q96T59 188 aa13.91□□□□□ -0.18
USF1-202ENST00000368020 ATP13A3Q9H7F0 1226 aa13.91□□□□□ -0.18
USF1-202ENST00000368020 CERS4Q9HA82 394 aa13.91□□□□□ -0.18
USF1-202ENST00000368020 MID1IP1Q9NPA3 183 aa13.91□□□□□ -0.18
USF1-202ENST00000368020 TMEM45AQ9NWC5 275 aa13.91□□□□□ -0.18
USF1-202ENST00000368020 DPP7Q9UHL4 492 aa13.91□□□□□ -0.18
USF1-202ENST00000368020 SARDHQ9UL12 918 aa13.91□□□□□ -0.18
USF1-202ENST00000368020 G3BP2Q9UN86 482 aaKnown RBP13.91□□□□□ -0.18
USF1-202ENST00000368020 SCN8AQ9UQD0 1980 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 UBFD1O14562 309 aaKnown RBP13.9□□□□□ -0.18
USF1-202ENST00000368020 PRMT5O14744 637 aaPredicted RBP13.9□□□□□ -0.18
USF1-202ENST00000368020 HTRA2O43464 458 aaPredicted RBP13.9□□□□□ -0.18
USF1-202ENST00000368020 PEX1O43933 1283 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 SNX2O60749 519 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 CRCPO75575 148 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 CDK14O94921 469 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 RPS17P08708 135 aaKnown RBP13.9□□□□□ -0.18
USF1-202ENST00000368020 ENO3P13929 434 aaPredicted RBP13.9□□□□□ -0.18
USF1-202ENST00000368020 CLCQ05315 142 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 GRIK2Q13002 908 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 PEX6Q13608 980 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 ZNF423Q2M1K9 1284 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 UGT3A2Q3SY77 523 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 TCHHL1Q5QJ38 904 aaPredicted RBP13.9□□□□□ -0.18
USF1-202ENST00000368020 TXNDC8Q6A555 127 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 PSAPL1Q6NUJ1 521 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 ADAMTSL2Q86TH1 951 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 PCYOX1LQ8NBM8 494 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 CATSPER1Q8NEC5 780 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 FIBINQ8TAL6 211 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 TSPEARQ8WU66 669 aa13.9□□□□□ -0.18
USF1-202ENST00000368020 FUBP1Q96AE4 644 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms