RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 YWHAQP27348 245 aa13.88□□□□□ -0.19
SMC5-201ENST00000361138 RAP1GAP2Q684P5 730 aa13.88□□□□□ -0.19
SMC5-201ENST00000361138 OR52E8Q6IFG1 317 aa13.88□□□□□ -0.19
SMC5-201ENST00000361138 CGB2Q6NT52 195 aa13.88□□□□□ -0.19
SMC5-201ENST00000361138 ESRP1Q6NXG1 681 aaKnown RBP13.88□□□□□ -0.19
SMC5-201ENST00000361138 ELMO1Q92556 727 aa13.88□□□□□ -0.19
SMC5-201ENST00000361138 ZFP42Q96MM3 310 aa13.88□□□□□ -0.19
SMC5-201ENST00000361138 UXTQ9UBK9 157 aaPredicted RBP13.88□□□□□ -0.19
SMC5-201ENST00000361138 A0A1B0GVG6 124 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 SH3PXD2BA1X283 911 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 CHRM1P11229 460 aaPredicted RBP13.87□□□□□ -0.19
SMC5-201ENST00000361138 STX4Q12846 297 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 SKIV2LQ15477 1246 aaKnown RBP13.87□□□□□ -0.19
SMC5-201ENST00000361138 DPYSL2Q16555 572 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 SLC39A12Q504Y0 691 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 ARMC12Q5T9G4 340 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 ZFP28Q8NHY6 868 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 IPCEF1Q8WWN9 437 aaPredicted RBP13.87□□□□□ -0.19
SMC5-201ENST00000361138 GATA6Q92908 595 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 LRRC58Q96CX6 371 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 MBD2Q9UBB5 411 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 RFPL1O75677 317 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 PGLSO95336 258 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 TOP3BO95985 862 aaKnown RBP13.87□□□□□ -0.19
SMC5-201ENST00000361138 PIRTP0C851 137 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 T-ENOLP0DO92 83 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 TCF3P15923 654 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 CCNCP24863 283 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 SDC2P34741 201 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 SLC1A2P43004 574 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 TUBA3CQ13748 450 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 IKBKEQ14164 716 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 ERICH5Q6P6B1 374 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 ZNF773Q6PK81 442 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 OR4A15Q8NGL6 344 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 CLHC1Q8NHS4 586 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 ABCG8Q9H221 673 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 ZNF490Q9ULM2 529 aaPredicted RBP13.87□□□□□ -0.19
SMC5-201ENST00000361138 STAT5AP42229 794 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 IL18Q14116 193 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 RAB39AQ14964 217 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 CDK20Q8IZL9 346 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 FAM124BQ9H5Z6 455 aaPredicted RBP13.87□□□□□ -0.19
SMC5-201ENST00000361138 GMIPQ9P107 970 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 NOTOA8MTQ0 251 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 H3BNH8 94 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 NOS1APO75052 506 aaPredicted RBP13.87□□□□□ -0.19
SMC5-201ENST00000361138 CYP7B1O75881 506 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 CLTBP09497 229 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 POLR2EP19388 210 aaKnown RBP13.87□□□□□ -0.19
SMC5-201ENST00000361138 EEFSECP57772 596 aaKnown RBP13.87□□□□□ -0.19
SMC5-201ENST00000361138 ABATP80404 500 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 CATSPERGQ6ZRH7 1159 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 TOP6BLQ8N6T0 577 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 ZNF671Q8TAW3 534 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 PTGFRNQ9P2B2 879 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 MOXD2PA6NHM9 499 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 STX11O75558 287 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 PORP16435 677 aaPredicted RBP13.87□□□□□ -0.19
SMC5-201ENST00000361138 DGKZQ13574 1117 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 USP39Q53GS9 565 aaKnown RBP13.87□□□□□ -0.19
SMC5-201ENST00000361138 OR10A6Q8NH74 314 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 LMO3Q8TAP4 145 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 TMEM159Q96B96 161 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 DIRAS2Q96HU8 199 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 NTPCRQ9BSD7 190 aaKnown RBP13.87□□□□□ -0.19
SMC5-201ENST00000361138 NIFKQ9BYG3 293 aaKnown RBP13.87□□□□□ -0.19
SMC5-201ENST00000361138 COL20A1Q9P218 1284 aa13.87□□□□□ -0.19
SMC5-201ENST00000361138 PARP4Q9UKK3 1724 aaKnown RBP13.87□□□□□ -0.19
SMC5-201ENST00000361138 TMEM233B4DJY2 109 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 WNT10BO00744 389 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 FBP2O00757 339 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 SEMA3DO95025 777 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 PGRP06401 933 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 PLEKHG6Q3KR16 790 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 ANXA8L1Q5VT79 327 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 IQSEC1Q6DN90 963 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 C16orf62Q7Z3J2 963 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.86□□□□□ -0.19
SMC5-201ENST00000361138 AKT1S1Q96B36 256 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 TLE6Q9H808 572 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 LRTM1Q9HBL6 345 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 CNTN3Q9P232 1028 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 AP2A2O94973 939 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 CD36P16671 472 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 MC4RP32245 332 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 IST1P53990 364 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 DNASE1L3Q13609 305 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 SPATA22Q8NHS9 363 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 SLC38A2Q96QD8 506 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 M0QX08 132 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 OR10H3O60404 316 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 TIE1P35590 1138 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 MTPNP58546 118 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 IRF8Q02556 426 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 LYPLAL1Q5VWZ2 237 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 LDB1Q86U70 411 aaPredicted RBP13.86□□□□□ -0.19
SMC5-201ENST00000361138 LRRC3Q9BY71 257 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 ZNHIT2Q9UHR6 403 aa13.86□□□□□ -0.19
SMC5-201ENST00000361138 CYP2B6P20813 491 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms