RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 HOXB2P14652 356 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 DDX6P26196 483 aaKnown RBP eCLIP8.22□□□□□ -1.09
CD44-205ENST00000352818 CD6P30203 668 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 GRIA2P42262 883 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 TNFRSF4P43489 277 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 SCTRP47872 440 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 SERPINB8P50452 374 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 CCT8P50990 548 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 ERVPABLB-1P60509 514 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 KDSRQ06136 332 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 IL10RBQ08334 325 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 CERCAMQ5T4B2 595 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 TEDDM1Q5T9Z0 273 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 MROH9Q5TGP6 573 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 ATG16L1Q676U5 607 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 RAP1GAP2Q684P5 730 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 ALG1LQ6GMV1 187 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 NADSYN1Q6IA69 706 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 RANBP10Q6VN20 620 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 FAM47EQ6ZV65 393 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 OTOAQ7RTW8 1153 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 GALNT7Q86SF2 657 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 KCNMB4Q86W47 210 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 NDUFAF2Q8N183 169 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 CCDC63Q8NA47 563 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 PPHLN1Q8NEY8 458 aaKnown RBP8.22□□□□□ -1.09
CD44-205ENST00000352818 SH3RF2Q8TEC5 729 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 NSMCE1Q8WV22 266 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 SPOCK2Q92563 424 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 IGSF8Q969P0 613 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 HMCESQ96FZ2 354 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 MRGPRX2Q96LB1 330 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 GCNAQ96QF7 691 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 FICDQ9BVA6 458 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 GPR174Q9BXC1 333 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 RASSF4Q9H2L5 321 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 CCSER2Q9H7U1 834 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 PCMTD2Q9NV79 361 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 RBM22Q9NW64 420 aaKnown RBP eCLIP8.22□□□□□ -1.09
CD44-205ENST00000352818 TXNDC16Q9P2K2 825 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 DCDC2Q9UHG0 476 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 ANKRD6Q9Y2G4 727 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 APCP25054 2843 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 ANAPC1Q9H1A4 1944 aa8.21□□□□□ -1.09
CD44-205ENST00000352818 ZNF840PA6NDX5 716 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 CFAP73A6NFT4 308 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 TPP1O14773 563 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 SCAMP3O14828 347 aaKnown RBP8.21□□□□□ -1.1
CD44-205ENST00000352818 TRIM24O15164 1050 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 PRAMEF11O60813 436 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 NEBLO76041 1014 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 CNTN5O94779 1100 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 NFATC1O95644 943 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 LDOC1O95751 146 aaPredicted RBP8.21□□□□□ -1.1
CD44-205ENST00000352818 APODP05090 189 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 ATP5BP06576 529 aaKnown RBP8.21□□□□□ -1.1
CD44-205ENST00000352818 BPGMP07738 259 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 ERVK-10P10266 1014 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 CDK4P11802 303 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 PAMP19021 973 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 ALDH3A1P30838 453 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 ATP5C1P36542 298 aaKnown RBP8.21□□□□□ -1.1
CD44-205ENST00000352818 DCTP40126 519 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 CTSKP43235 329 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 SLC11A2P49281 568 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 LIG3P49916 1009 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 CDH4P55283 916 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 GABREP78334 506 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 BNIP1Q12981 228 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 CLN3Q13286 438 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 OLIG2Q13516 323 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 VEPH1Q14D04 833 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 POLD3Q15054 466 aaPredicted RBP8.21□□□□□ -1.1
CD44-205ENST00000352818 DHCR24Q15392 516 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 UGP2Q16851 508 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 SPRED3Q2MJR0 410 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 CCDC153Q494R4 210 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 ALFQ53S48 1182 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 PRAMEF14Q5SWL7 426 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 HECTD3Q5T447 861 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 TMCO4Q5TGY1 634 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 MARC1Q5VT66 337 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 EGFLAMQ63HQ2 1017 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 KIAA0930Q6ICG6 404 aaPredicted RBP8.21□□□□□ -1.1
CD44-205ENST00000352818 CHST9Q7L1S5 443 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 TFAP2DQ7Z6R9 452 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 UNC5BQ8IZJ1 945 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 ADGRG2Q8IZP9 1017 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 CADM4Q8NFZ8 388 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 SPATA22Q8NHS9 363 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 PEX13Q92968 403 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 MFSD3Q96ES6 412 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 RMDN2Q96LZ7 410 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 RPRD1AQ96P16 312 aaPredicted RBP8.21□□□□□ -1.1
CD44-205ENST00000352818 SIKE1Q9BRV8 207 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 FAM167BQ9BTA0 163 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 TSSK1BQ9BXA7 367 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 FSD1LQ9BXM9 530 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 MAGEH1Q9H213 219 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 SP110Q9HB58 689 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms