RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 ZNF33AQ06730 810 aa14.37□□□□□ -0.11
SNX20-202ENST00000330943 SPATS1Q496A3 300 aa14.37□□□□□ -0.11
SNX20-202ENST00000330943 TIGD2Q4W5G0 525 aa14.37□□□□□ -0.11
SNX20-202ENST00000330943 TAF2Q6P1X5 1199 aa14.37□□□□□ -0.11
SNX20-202ENST00000330943 LIMS2Q7Z4I7 341 aa14.37□□□□□ -0.11
SNX20-202ENST00000330943 C8orf59Q8N0T1 100 aaPredicted RBP14.37□□□□□ -0.11
SNX20-202ENST00000330943 CADM3Q8N126 398 aa14.37□□□□□ -0.11
SNX20-202ENST00000330943 TSPYL2Q9H2G4 693 aaPredicted RBP14.37□□□□□ -0.11
SNX20-202ENST00000330943 HPS4Q9NQG7 708 aa14.37□□□□□ -0.11
SNX20-202ENST00000330943 MARCH4Q9P2E8 410 aaPredicted RBP14.37□□□□□ -0.11
SNX20-202ENST00000330943 TIMM22Q9Y584 194 aa14.37□□□□□ -0.11
SNX20-202ENST00000330943 COL1A2P08123 1366 aa14.37□□□□□ -0.11
SNX20-202ENST00000330943 DNAJC25-GNG10A0A024R161 153 aa14.36□□□□□ -0.11
SNX20-202ENST00000330943 CCDC154A6NI56 674 aa14.36□□□□□ -0.11
SNX20-202ENST00000330943 C1RP00736 705 aa14.36□□□□□ -0.11
SNX20-202ENST00000330943 HTR1BP28222 390 aa14.36□□□□□ -0.11
SNX20-202ENST00000330943 ZNF135P52742 658 aaPredicted RBP14.36□□□□□ -0.11
SNX20-202ENST00000330943 RCAN2Q14206 197 aa14.36□□□□□ -0.11
SNX20-202ENST00000330943 SKIV2LQ15477 1246 aaKnown RBP14.36□□□□□ -0.11
SNX20-202ENST00000330943 RBM48Q5RL73 367 aaKnown RBP14.36□□□□□ -0.11
SNX20-202ENST00000330943 ZNF362Q5T0B9 420 aaPredicted RBP14.36□□□□□ -0.11
SNX20-202ENST00000330943 RALGPS2Q86X27 583 aaPredicted RBP14.36□□□□□ -0.11
SNX20-202ENST00000330943 SCAIQ8N9R8 606 aa14.36□□□□□ -0.11
SNX20-202ENST00000330943 ZMIZ2Q8NF64 920 aa14.36□□□□□ -0.11
SNX20-202ENST00000330943 OR13J1Q8NGT2 312 aa14.36□□□□□ -0.11
SNX20-202ENST00000330943 BPIFB1Q8TDL5 484 aa14.36□□□□□ -0.11
SNX20-202ENST00000330943 HPS1Q92902 700 aa14.36□□□□□ -0.11
SNX20-202ENST00000330943 PABPC5Q96DU9 382 aaKnown RBP14.36□□□□□ -0.11
SNX20-202ENST00000330943 NSMCE2Q96MF7 247 aa14.36□□□□□ -0.11
SNX20-202ENST00000330943 C16orf70Q9BSU1 422 aa14.36□□□□□ -0.11
SNX20-202ENST00000330943 NDFIP2Q9NV92 336 aa14.36□□□□□ -0.11
SNX20-202ENST00000330943 KIAA1522Q9P206 1035 aaPredicted RBP14.36□□□□□ -0.11
SNX20-202ENST00000330943 CACNG4Q9UBN1 327 aa14.36□□□□□ -0.11
SNX20-202ENST00000330943 GIT1Q9Y2X7 761 aa14.36□□□□□ -0.11
SNX20-202ENST00000330943 SLC25A27O95847 323 aa14.36□□□□□ -0.11
SNX20-202ENST00000330943 ALPLP05186 524 aa14.36□□□□□ -0.11
SNX20-202ENST00000330943 CD1DP15813 335 aa14.36□□□□□ -0.11
SNX20-202ENST00000330943 ARSDP51689 593 aa14.36□□□□□ -0.11
SNX20-202ENST00000330943 EEFSECP57772 596 aaKnown RBP14.36□□□□□ -0.11
SNX20-202ENST00000330943 UFM1P61960 85 aa14.36□□□□□ -0.11
SNX20-202ENST00000330943 OR4D1Q15615 310 aa14.36□□□□□ -0.11
SNX20-202ENST00000330943 SLC16A12Q6ZSM3 486 aa14.36□□□□□ -0.11
SNX20-202ENST00000330943 FRA10AC1Q70Z53 315 aa14.36□□□□□ -0.11
SNX20-202ENST00000330943 GPC2Q8N158 579 aa14.36□□□□□ -0.11
SNX20-202ENST00000330943 PARP8Q8N3A8 854 aa14.36□□□□□ -0.11
SNX20-202ENST00000330943 TOP6BLQ8N6T0 577 aa14.36□□□□□ -0.11
SNX20-202ENST00000330943 FKBP10Q96AY3 582 aa14.36□□□□□ -0.11
SNX20-202ENST00000330943 ASB2Q96Q27 587 aa14.36□□□□□ -0.11
SNX20-202ENST00000330943 TOR3AQ9H497 397 aa14.36□□□□□ -0.11
SNX20-202ENST00000330943 SEMA4BQ9NPR2 832 aaPredicted RBP14.36□□□□□ -0.11
SNX20-202ENST00000330943 BAG5Q9UL15 447 aa14.36□□□□□ -0.11
SNX20-202ENST00000330943 PIN4Q9Y237 131 aaKnown RBP14.36□□□□□ -0.11
SNX20-202ENST00000330943 PCDHGA8Q9Y5G5 932 aa14.36□□□□□ -0.11
SNX20-202ENST00000330943 UPK1AO00322 258 aa14.35□□□□□ -0.11
SNX20-202ENST00000330943 DEAF1O75398 565 aaPredicted RBP14.35□□□□□ -0.11
SNX20-202ENST00000330943 CYBBP04839 570 aa14.35□□□□□ -0.11
SNX20-202ENST00000330943 HTR1AP08908 422 aa14.35□□□□□ -0.11
SNX20-202ENST00000330943 TRIM32Q13049 653 aa14.35□□□□□ -0.11
SNX20-202ENST00000330943 CBX2Q14781 532 aaPredicted RBP14.35□□□□□ -0.11
SNX20-202ENST00000330943 MEP1AQ16819 746 aa14.35□□□□□ -0.11
SNX20-202ENST00000330943 GLYATQ6IB77 296 aa14.35□□□□□ -0.11
SNX20-202ENST00000330943 HERC2P3Q9BVR0 1158 aa14.35□□□□□ -0.11
SNX20-202ENST00000330943 NEU3Q9UQ49 428 aa14.35□□□□□ -0.11
SNX20-202ENST00000330943 RBMX2Q9Y388 322 aaKnown RBP14.35□□□□□ -0.11
SNX20-202ENST00000330943 PDCD11Q14690 1871 aaKnown RBP14.35□□□□□ -0.11
SNX20-202ENST00000330943 PAPPA2Q9BXP8 1791 aa14.35□□□□□ -0.11
SNX20-202ENST00000330943 C16orf96A6NNT2 1141 aa14.35□□□□□ -0.11
SNX20-202ENST00000330943 WISP3O95389 354 aaPredicted RBP14.35□□□□□ -0.11
SNX20-202ENST00000330943 S1PR4O95977 384 aa14.35□□□□□ -0.11
SNX20-202ENST00000330943 CDH1P12830 882 aa14.35□□□□□ -0.11
SNX20-202ENST00000330943 SERPINH1P50454 418 aaKnown RBP14.35□□□□□ -0.11
SNX20-202ENST00000330943 SCIMPQ6UWF3 145 aa14.35□□□□□ -0.11
SNX20-202ENST00000330943 PCED1BQ96HM7 432 aa14.35□□□□□ -0.11
SNX20-202ENST00000330943 PCDH12Q9NPG4 1184 aa14.35□□□□□ -0.11
SNX20-202ENST00000330943 MTRRQ9UBK8 725 aa14.35□□□□□ -0.11
SNX20-202ENST00000330943 PDE10AQ9Y233 779 aa14.35□□□□□ -0.11
SNX20-202ENST00000330943 TIMM13Q9Y5L4 95 aaPredicted RBP14.35□□□□□ -0.11
SNX20-202ENST00000330943 MIA3Q5JRA6 1907 aa14.35□□□□□ -0.11
SNX20-202ENST00000330943 MYBPHLA2RUH7 354 aa14.35□□□□□ -0.11
SNX20-202ENST00000330943 EEDO75530 441 aaKnown RBP14.35□□□□□ -0.11
SNX20-202ENST00000330943 JRKO75564 520 aa14.35□□□□□ -0.11
SNX20-202ENST00000330943 OXSR1O95747 527 aaPredicted RBP14.35□□□□□ -0.11
SNX20-202ENST00000330943 IST1P53990 364 aa14.35□□□□□ -0.11
SNX20-202ENST00000330943 ITKQ08881 620 aa14.35□□□□□ -0.11
SNX20-202ENST00000330943 DNASE1L3Q13609 305 aa14.35□□□□□ -0.11
SNX20-202ENST00000330943 BHLHA9Q7RTU4 235 aa14.35□□□□□ -0.11
SNX20-202ENST00000330943 SLCO6A1Q86UG4 719 aa14.35□□□□□ -0.11
SNX20-202ENST00000330943 RIMKLAQ8IXN7 391 aa14.35□□□□□ -0.11
SNX20-202ENST00000330943 HDAC2Q92769 488 aaKnown RBP14.35□□□□□ -0.11
SNX20-202ENST00000330943 WDR12Q9GZL7 423 aaKnown RBP14.35□□□□□ -0.11
SNX20-202ENST00000330943 KLHL25Q9H0H3 589 aa14.35□□□□□ -0.11
SNX20-202ENST00000330943 LEF1Q9UJU2 399 aaPredicted RBP14.35□□□□□ -0.11
SNX20-202ENST00000330943 MAN1A2O60476 641 aa14.34□□□□□ -0.11
SNX20-202ENST00000330943 ZNF24P17028 368 aa14.34□□□□□ -0.11
SNX20-202ENST00000330943 HTR1EP28566 365 aa14.34□□□□□ -0.11
SNX20-202ENST00000330943 ZFP36L2P47974 494 aaKnown RBP14.34□□□□□ -0.11
SNX20-202ENST00000330943 MAXP61244 160 aa14.34□□□□□ -0.11
SNX20-202ENST00000330943 HABP4Q5JVS0 413 aaKnown RBP14.34□□□□□ -0.11
SNX20-202ENST00000330943 PROSER1Q86XN7 944 aa14.34□□□□□ -0.11
SNX20-202ENST00000330943 TMEM199Q8N511 208 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms