RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 PALMDQ9NP74 551 aa14.58□□□□□ -0.07
COL6A2-201ENST00000300527 NDFIP2Q9NV92 336 aa14.58□□□□□ -0.07
COL6A2-201ENST00000300527 FBXW11Q9UKB1 542 aa14.58□□□□□ -0.07
COL6A2-201ENST00000300527 PIN4Q9Y237 131 aaKnown RBP14.58□□□□□ -0.07
COL6A2-201ENST00000300527 IQCA1LA6NCM1 817 aa14.58□□□□□ -0.08
COL6A2-201ENST00000300527 G3V2T6 193 aa14.58□□□□□ -0.08
COL6A2-201ENST00000300527 JRKO75564 520 aa14.58□□□□□ -0.08
COL6A2-201ENST00000300527 SEC24AO95486 1093 aa14.58□□□□□ -0.08
COL6A2-201ENST00000300527 LGALS2P05162 132 aa14.58□□□□□ -0.08
COL6A2-201ENST00000300527 GMPSP49915 693 aaPredicted RBP14.58□□□□□ -0.08
COL6A2-201ENST00000300527 CCNA1P78396 465 aa14.58□□□□□ -0.08
COL6A2-201ENST00000300527 CD47Q08722 323 aa14.58□□□□□ -0.08
COL6A2-201ENST00000300527 SELPLGQ14242 412 aa14.58□□□□□ -0.08
COL6A2-201ENST00000300527 ACAP2Q15057 778 aa14.58□□□□□ -0.08
COL6A2-201ENST00000300527 AAK1Q2M2I8 961 aa14.58□□□□□ -0.08
COL6A2-201ENST00000300527 FRA10AC1Q70Z53 315 aa14.58□□□□□ -0.08
COL6A2-201ENST00000300527 ISCA2Q86U28 154 aa14.58□□□□□ -0.08
COL6A2-201ENST00000300527 NODALQ96S42 347 aa14.58□□□□□ -0.08
COL6A2-201ENST00000300527 THUMPD3Q9BV44 507 aaKnown RBP14.58□□□□□ -0.08
COL6A2-201ENST00000300527 MROQ9BYG7 248 aa14.58□□□□□ -0.08
COL6A2-201ENST00000300527 MRGBPQ9NV56 204 aa14.58□□□□□ -0.08
COL6A2-201ENST00000300527 ADAMTS5Q9UNA0 930 aa14.58□□□□□ -0.08
COL6A2-201ENST00000300527 OAS3Q9Y6K5 1087 aaKnown RBP14.58□□□□□ -0.08
COL6A2-201ENST00000300527 CST1P01037 141 aa14.58□□□□□ -0.08
COL6A2-201ENST00000300527 FTH1P02794 183 aa14.58□□□□□ -0.08
COL6A2-201ENST00000300527 CCR1P32246 355 aa14.58□□□□□ -0.08
COL6A2-201ENST00000300527 TAF6P49848 677 aa14.58□□□□□ -0.08
COL6A2-201ENST00000300527 GEMP55040 296 aa14.58□□□□□ -0.08
COL6A2-201ENST00000300527 GRSF1Q12849 480 aaKnown RBP eCLIP14.58□□□□□ -0.08
COL6A2-201ENST00000300527 KCNAB2Q13303 367 aa14.58□□□□□ -0.08
COL6A2-201ENST00000300527 SIM2Q14190 667 aaPredicted RBP14.58□□□□□ -0.08
COL6A2-201ENST00000300527 KCTD2Q14681 263 aa14.58□□□□□ -0.08
COL6A2-201ENST00000300527 C6orf141Q5SZD1 244 aa14.58□□□□□ -0.08
COL6A2-201ENST00000300527 DENND5AQ6IQ26 1287 aa14.58□□□□□ -0.08
COL6A2-201ENST00000300527 ANKRD13BQ86YJ7 626 aa14.58□□□□□ -0.08
COL6A2-201ENST00000300527 POC5Q8NA72 575 aa14.58□□□□□ -0.08
COL6A2-201ENST00000300527 BLOC1S5Q8TDH9 187 aa14.58□□□□□ -0.08
COL6A2-201ENST00000300527 ITPKCQ96DU7 683 aa14.58□□□□□ -0.08
COL6A2-201ENST00000300527 NSMCE3Q96MG7 304 aa14.58□□□□□ -0.08
COL6A2-201ENST00000300527 CDK15Q96Q40 435 aa14.58□□□□□ -0.08
COL6A2-201ENST00000300527 PCDHA9Q9Y5H5 950 aa14.58□□□□□ -0.08
COL6A2-201ENST00000300527 MSI1O43347 362 aaKnown RBP14.57□□□□□ -0.08
COL6A2-201ENST00000300527 TBX1O43435 398 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 CPNE6O95741 557 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 BMP4P12644 408 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 DPEP1P16444 411 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 ITGB6P18564 788 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 RPS3AP61247 264 aaKnown RBP14.57□□□□□ -0.08
COL6A2-201ENST00000300527 HERVK_113P63132 956 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 SOX4Q06945 474 aaPredicted RBP14.57□□□□□ -0.08
COL6A2-201ENST00000300527 PHKG1Q16816 387 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 PAN2Q504Q3 1202 aaKnown RBP14.57□□□□□ -0.08
COL6A2-201ENST00000300527 C8orf82Q6P1X6 216 aaPredicted RBP14.57□□□□□ -0.08
COL6A2-201ENST00000300527 PLD3Q8IV08 490 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 FRS2Q8WU20 508 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 MAGED4Q96JG8 741 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 SNX27Q96L92 541 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 VAT1Q99536 393 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 TUBA1CQ9BQE3 449 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 ERVK-6Q9BXR3 956 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 WDR12Q9GZL7 423 aaKnown RBP14.57□□□□□ -0.08
COL6A2-201ENST00000300527 PDGFDQ9GZP0 370 aaPredicted RBP14.57□□□□□ -0.08
COL6A2-201ENST00000300527 ABCD2Q9UBJ2 740 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 CAPN15O75808 1086 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 FADS2O95864 444 aaKnown RBP14.57□□□□□ -0.08
COL6A2-201ENST00000300527 PRSS56P0CW18 603 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 HRH2P25021 359 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 CD86P42081 329 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 ALDH3A2P51648 485 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 FSCN1Q16658 493 aaKnown RBP14.57□□□□□ -0.08
COL6A2-201ENST00000300527 CTU2Q2VPK5 515 aaKnown RBP14.57□□□□□ -0.08
COL6A2-201ENST00000300527 ATP6AP1LQ52LC2 224 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 FAM98BQ52LJ0 330 aaKnown RBP14.57□□□□□ -0.08
COL6A2-201ENST00000300527 SCML4Q8N228 414 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 PDPRQ8NCN5 879 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 C17orf50Q8WW18 174 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 RORBQ92753 470 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 ALOXE3Q9BYJ1 711 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 SLC39A8Q9C0K1 460 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 SARS2Q9NP81 518 aaKnown RBP14.57□□□□□ -0.08
COL6A2-201ENST00000300527 GTF2IRD1Q9UHL9 959 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 ZNF638Q14966 1978 aaKnown RBP14.57□□□□□ -0.08
COL6A2-201ENST00000300527 SLC22A3O75751 556 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 CLCN5P51795 746 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 SKIV2LQ15477 1246 aaKnown RBP14.57□□□□□ -0.08
COL6A2-201ENST00000300527 OR4D1Q15615 310 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 BLOC1S3Q6QNY0 202 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 ENPP6Q6UWR7 440 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 CRYBG2Q8N1P7 616 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 CDYL2Q8N8U2 506 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 RPL3LQ92901 407 aaKnown RBP14.57□□□□□ -0.08
COL6A2-201ENST00000300527 TBATAQ96M53 351 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 C6orf62Q9GZU0 229 aaPredicted RBP14.57□□□□□ -0.08
COL6A2-201ENST00000300527 TPK1Q9H3S4 243 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.57□□□□□ -0.08
COL6A2-201ENST00000300527 RNF112Q9ULX5 631 aa14.57□□□□□ -0.08
COL6A2-201ENST00000300527 SOAT2O75908 522 aa14.56□□□□□ -0.08
COL6A2-201ENST00000300527 CYBBP04839 570 aa14.56□□□□□ -0.08
COL6A2-201ENST00000300527 AGTR2P50052 363 aa14.56□□□□□ -0.08
COL6A2-201ENST00000300527 POLR2JP52435 117 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms