RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 ZNF527Q8NB42 609 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 TRAPPC12Q8WVT3 735 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 SHC3Q92529 594 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 MKL1Q969V6 931 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 C12orf66Q96MD2 445 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 SRMSQ9H3Y6 488 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 DNAJC5Q9H3Z4 198 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 ARHGEF4Q9NR80 690 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 FNIP2Q9P278 1114 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 EFR3BQ9Y2G0 817 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 GPC6Q9Y625 555 aaPredicted RBP4.05□□□□□ -1.76
SCN3A-201ENST00000283254 PTPRJQ12913 1337 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 ABCA6Q8N139 1617 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 ARHGEF33A8MVX0 844 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 SPATA31C2B4DYI2 1134 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 PITPNM1O00562 1244 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 CBFA2T3O75081 653 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 TGDSO95455 350 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 DHFRP00374 187 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 PGK1P00558 417 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 CLUP10909 449 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 DDX6P26196 483 aaKnown RBP eCLIP4.05□□□□□ -1.76
SCN3A-201ENST00000283254 PSMB4P28070 264 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 DNAJA1P31689 397 aaKnown RBP4.05□□□□□ -1.76
SCN3A-201ENST00000283254 HNF4AP41235 474 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 DUSP3P51452 185 aaPredicted RBP4.05□□□□□ -1.76
SCN3A-201ENST00000283254 MAPK14Q16539 360 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 GCNT6Q5T4J0 391 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 SLC25A25Q6KCM7 469 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.05□□□□□ -1.76
SCN3A-201ENST00000283254 FAM124AQ86V42 546 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 OR2AJ1Q8NGZ0 328 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 EPS8L1Q8TE68 723 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 KCTD13Q8WZ19 329 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 ARHGAP9Q9BRR9 750 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 AARSD1Q9BTE6 412 aaKnown RBP4.05□□□□□ -1.76
SCN3A-201ENST00000283254 CCDC28BQ9BUN5 200 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 NUSAP1Q9BXS6 441 aaKnown RBP4.05□□□□□ -1.76
SCN3A-201ENST00000283254 TTYH1Q9H313 450 aaPredicted RBP4.05□□□□□ -1.76
SCN3A-201ENST00000283254 DMTF1Q9Y222 760 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 HPSEQ9Y251 543 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 NR2E1Q9Y466 385 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 PCDHGB7Q9Y5F8 929 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 SPTBN2O15020 2390 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 TPP1O14773 563 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 KHDRBS3O75525 346 aaKnown RBP4.05□□□□□ -1.76
SCN3A-201ENST00000283254 CSDE1O75534 798 aaKnown RBP4.05□□□□□ -1.76
SCN3A-201ENST00000283254 TCEA3O75764 348 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 RPP40O75818 363 aaKnown RBP4.05□□□□□ -1.76
SCN3A-201ENST00000283254 CXCL14O95715 111 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 ALOX5P09917 674 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 RARAP10276 462 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 ZNF730Q6ZMV8 503 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 NUDT13Q86X67 352 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 TBC1D21Q8IYX1 336 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 CENPSQ8N2Z9 138 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 OR14C36Q8NHC7 312 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 ANKRD7Q92527 254 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 FAXDC2Q96IV6 333 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 GAL3ST4Q96RP7 486 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 SLC2A11Q9BYW1 496 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 WDR12Q9GZL7 423 aaKnown RBP4.05□□□□□ -1.76
SCN3A-201ENST00000283254 ANKZF1Q9H8Y5 726 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 SLC35C2Q9NQQ7 365 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 SERINC1Q9NRX5 453 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.05□□□□□ -1.76
SCN3A-201ENST00000283254 DUS2Q9NX74 493 aaKnown RBP4.05□□□□□ -1.76
SCN3A-201ENST00000283254 DAPK2Q9UIK4 370 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 IKZF2Q9UKS7 526 aa4.05□□□□□ -1.76
SCN3A-201ENST00000283254 MRPS7Q9Y2R9 242 aaKnown RBP4.05□□□□□ -1.76
SCN3A-201ENST00000283254 ENO4A6NNW6 628 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 PDCD5O14737 125 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 RGS10O43665 173 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 SCELO95171 688 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 PRAMEF12O95522 483 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 C1RP00736 705 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 CFIP05156 583 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 THRBP10828 461 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 PTPN2P17706 415 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 PSMA1P25786 263 aaKnown RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 CD52P31358 61 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 RFC2P35250 354 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 PKNOX1P55347 436 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 SLC1A5Q15758 541 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 DUPD1Q68J44 220 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 BRAT1Q6PJG6 821 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 FAM151BQ6UXP7 276 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 OTOP1Q7RTM1 612 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 DEFB132Q7Z7B7 95 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 GLB1L3Q8NCI6 653 aaPredicted RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 FCRL2Q96LA5 508 aaPredicted RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 MIPEPQ99797 713 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 COMMD4Q9H0A8 199 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 DZANK1Q9NVP4 752 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 MCM8Q9UJA3 840 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 COG5Q9UP83 839 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 VWA7Q9Y334 891 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 PTGES3LE9PB15 166 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 DHX15O43143 795 aaKnown RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 TPD52L2O43399 206 aaKnown RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms