RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 ADAMTS14Q8WXS8 1223 aa11.2□□□□□ -0.62
SF3B6-201ENST00000233468 CAPZA3Q96KX2 299 aa11.2□□□□□ -0.62
SF3B6-201ENST00000233468 APOL2Q9BQE5 337 aa11.2□□□□□ -0.62
SF3B6-201ENST00000233468 ZCCHC2Q9C0B9 1178 aaKnown RBP11.2□□□□□ -0.62
SF3B6-201ENST00000233468 NLGN3Q9NZ94 848 aa11.2□□□□□ -0.62
SF3B6-201ENST00000233468 IL17CQ9P0M4 197 aa11.2□□□□□ -0.62
SF3B6-201ENST00000233468 VPS18Q9P253 973 aa11.2□□□□□ -0.62
SF3B6-201ENST00000233468 FTSJ1Q9UET6 329 aa11.2□□□□□ -0.62
SF3B6-201ENST00000233468 PCOLCE2Q9UKZ9 415 aa11.2□□□□□ -0.62
SF3B6-201ENST00000233468 BTBD3Q9Y2F9 522 aa11.2□□□□□ -0.62
SF3B6-201ENST00000233468 SPO11Q9Y5K1 396 aa11.2□□□□□ -0.62
SF3B6-201ENST00000233468 URB1O60287 2271 aaKnown RBP11.2□□□□□ -0.62
SF3B6-201ENST00000233468 GCN1Q92616 2671 aaKnown RBP11.19□□□□□ -0.62
SF3B6-201ENST00000233468 GLYATL1P3A0A0U1RQE8 302 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 A0A0U1RQS6 177 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 PRSS38A1L453 326 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 HEATR9A2RTY3 570 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 NDC80O14777 642 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 AURKAO14965 403 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 SDC3O75056 442 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 USP12O75317 370 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 SLC25A14O95258 325 aaPredicted RBP11.19□□□□□ -0.62
SF3B6-201ENST00000233468 LDOC1O95751 146 aaPredicted RBP11.19□□□□□ -0.62
SF3B6-201ENST00000233468 IVLP07476 585 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 ANXA6P08133 673 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 ZSCAN5DPP0CG00 497 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 CDK4P11802 303 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 ETS1P14921 441 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 TPSB2P20231 275 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 RPIAP49247 311 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 DUSP3P51452 185 aaPredicted RBP11.19□□□□□ -0.62
SF3B6-201ENST00000233468 BNIP3Q12983 259 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 GPS1Q13098 491 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 GTF2H3Q13889 308 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 SHBQ15464 509 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 TPSAB1Q15661 275 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 SKIDA1Q1XH10 827 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 ALG11Q2TAA5 492 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 ZNF542PQ5EBM4 170 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 PRRT3Q5FWE3 981 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 ARMC3Q5W041 872 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 ALS2CLQ60I27 953 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 DENND5AQ6IQ26 1287 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 SYT10Q6XYQ8 523 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 CCNI2Q6ZMN8 369 aaPredicted RBP11.19□□□□□ -0.62
SF3B6-201ENST00000233468 RFLNAQ6ZTI6 216 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 PCGF5Q86SE9 256 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 GATAD2AQ86YP4 633 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 CREG2Q8IUH2 290 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 GPR26Q8NDV2 337 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 ZNF548Q8NEK5 533 aaPredicted RBP11.19□□□□□ -0.62
SF3B6-201ENST00000233468 STYXQ8WUJ0 223 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 TSACCQ96A04 125 aaPredicted RBP11.19□□□□□ -0.62
SF3B6-201ENST00000233468 ULK4Q96C45 1275 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 EID2BQ96D98 161 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 TTC25Q96NG3 672 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 VPS35Q96QK1 796 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 CARS2Q9HA77 564 aaKnown RBP11.19□□□□□ -0.62
SF3B6-201ENST00000233468 CYP4F12Q9HCS2 524 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 BPIFA1Q9NP55 256 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 TOR4AQ9NXH8 423 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 BFARQ9NZS9 450 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 SLC17A4Q9Y2C5 497 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 GPSM3Q9Y4H4 160 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 ARL5AQ9Y689 179 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 MYLKQ15746 1914 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 ASXL3Q9C0F0 2248 aa11.19□□□□□ -0.62
SF3B6-201ENST00000233468 SHROOM3Q8TF72 1996 aa11.18□□□□□ -0.62
SF3B6-201ENST00000233468 TMEM202A6NGA9 273 aa11.18□□□□□ -0.62
SF3B6-201ENST00000233468 LMO7DNF2Z398 122 aa11.18□□□□□ -0.62
SF3B6-201ENST00000233468 INPP4BO15327 924 aa11.18□□□□□ -0.62
SF3B6-201ENST00000233468 TNFSF14O43557 240 aa11.18□□□□□ -0.62
SF3B6-201ENST00000233468 CEACAM5P06731 702 aa11.18□□□□□ -0.62
SF3B6-201ENST00000233468 ITGALP20701 1170 aa11.18□□□□□ -0.62
SF3B6-201ENST00000233468 ADRA1DP25100 572 aa11.18□□□□□ -0.62
SF3B6-201ENST00000233468 NPY2RP49146 381 aa11.18□□□□□ -0.62
SF3B6-201ENST00000233468 ILF3Q12906 894 aaKnown RBP eCLIP11.18□□□□□ -0.62
SF3B6-201ENST00000233468 LRP8Q14114 963 aa11.18□□□□□ -0.62
SF3B6-201ENST00000233468 SEPT6Q14141 434 aa11.18□□□□□ -0.62
SF3B6-201ENST00000233468 LDLRAP1Q5SW96 308 aa11.18□□□□□ -0.62
SF3B6-201ENST00000233468 TPRG1LQ5T0D9 272 aa11.18□□□□□ -0.62
SF3B6-201ENST00000233468 ZCCHC8Q6NZY4 707 aaKnown RBP11.18□□□□□ -0.62
SF3B6-201ENST00000233468 DOK6Q6PKX4 331 aa11.18□□□□□ -0.62
SF3B6-201ENST00000233468 GLRX5Q86SX6 157 aa11.18□□□□□ -0.62
SF3B6-201ENST00000233468 GALNT13Q8IUC8 556 aa11.18□□□□□ -0.62
SF3B6-201ENST00000233468 SLC25A45Q8N413 288 aa11.18□□□□□ -0.62
SF3B6-201ENST00000233468 EID2Q8N6I1 236 aa11.18□□□□□ -0.62
SF3B6-201ENST00000233468 PPHLN1Q8NEY8 458 aaKnown RBP11.18□□□□□ -0.62
SF3B6-201ENST00000233468 OR4K2Q8NGD2 314 aa11.18□□□□□ -0.62
SF3B6-201ENST00000233468 OR52K1Q8NGK4 314 aa11.18□□□□□ -0.62
SF3B6-201ENST00000233468 OR4C6Q8NH72 309 aa11.18□□□□□ -0.62
SF3B6-201ENST00000233468 GDAP1Q8TB36 358 aa11.18□□□□□ -0.62
SF3B6-201ENST00000233468 BAHD1Q8TBE0 780 aaPredicted RBP11.18□□□□□ -0.62
SF3B6-201ENST00000233468 HEXDCQ8WVB3 486 aa11.18□□□□□ -0.62
SF3B6-201ENST00000233468 SLCO2A1Q92959 643 aa11.18□□□□□ -0.62
SF3B6-201ENST00000233468 PEX13Q92968 403 aa11.18□□□□□ -0.62
SF3B6-201ENST00000233468 GLYATL1Q969I3 302 aa11.18□□□□□ -0.62
SF3B6-201ENST00000233468 COX14Q96I36 57 aa11.18□□□□□ -0.62
SF3B6-201ENST00000233468 RANBP9Q96S59 729 aa11.18□□□□□ -0.62
SF3B6-201ENST00000233468 AGAP2Q99490 1192 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms