RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 RBM7Q9Y580 266 aaKnown RBP6.05□□□□□ -1.44
VPS13D-201ENST00000011700 WASF2Q9Y6W5 498 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 KANTRA0A1W2PQU2 76 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 RBMXL2O75526 392 aaKnown RBP6.05□□□□□ -1.44
VPS13D-201ENST00000011700 IFNW1P05000 195 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 CCNB1P14635 433 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 TNNI3P19429 210 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 TKTL1P51854 596 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 CYCSP99999 105 aaKnown RBP6.05□□□□□ -1.44
VPS13D-201ENST00000011700 FOLH1Q04609 750 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 LLGL1Q15334 1064 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 SPIN4Q56A73 249 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 LAYNQ6UX15 382 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 JAZF1Q86VZ6 243 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 PIGXQ8TBF5 258 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 LRRC20Q8TCA0 184 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 TMEM109Q9BVC6 243 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 CCDC86Q9H6F5 360 aaKnown RBP6.05□□□□□ -1.44
VPS13D-201ENST00000011700 SIX4Q9UIU6 781 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 TSPAN16Q9UKR8 245 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 B8ZZF3 427 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 GTPBP1O00178 669 aaKnown RBP6.05□□□□□ -1.44
VPS13D-201ENST00000011700 BCKDKO14874 412 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 HMGN1P05114 100 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 FBLN1P23142 703 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 IST1P53990 364 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.05□□□□□ -1.444e-6■□□□□ 9.8
VPS13D-201ENST00000011700 PLEKHG4Q58EX7 1191 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 CAPN13Q6MZZ7 669 aaPredicted RBP6.05□□□□□ -1.44
VPS13D-201ENST00000011700 C11orf74Q86VG3 221 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 AMIGO1Q86WK6 493 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 SUN5Q8TC36 379 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 TSPEARQ8WU66 669 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 CEP295NLQ96MC4 621 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 UNKQ9C0B0 810 aaKnown RBP6.05□□□□□ -1.44
VPS13D-201ENST00000011700 OSBPL2Q9H1P3 480 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 TMEM27Q9HBJ8 222 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 GPATCH2Q9NW75 528 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 FESP07332 822 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 UBA1P22314 1058 aaKnown RBP6.05□□□□□ -1.44
VPS13D-201ENST00000011700 UGT2B10P36537 528 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 GSTM4Q03013 218 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 SRSF11Q05519 484 aaKnown RBP6.05□□□□□ -1.44
VPS13D-201ENST00000011700 RABL3Q5HYI8 236 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 SYNE4Q8N205 404 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 SGCDQ92629 289 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 PLEKHG4BQ96PX9 1271 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 OR52E6Q96RD3 313 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 MYOZ2Q9NPC6 264 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 IFT46Q9NQC8 304 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 TAS2R8Q9NYW2 309 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 DOCK10Q96BY6 2186 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 DFNA5O60443 496 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 CLUP10909 449 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 COX4I1P13073 169 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 HMGCS2P54868 508 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 UFD1Q92890 307 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 NACC2Q96BF6 587 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 AP2M1Q96CW1 435 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 TXN2Q99757 166 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 CELF4Q9BZC1 486 aaKnown RBP6.05□□□□□ -1.44
VPS13D-201ENST00000011700 MFSD1Q9H3U5 465 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 SCP2D1Q9UJQ7 156 aa6.05□□□□□ -1.44
VPS13D-201ENST00000011700 NPIPA7E9PJI5 369 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 CCNT2O60583 730 aaKnown RBP6.04□□□□□ -1.44
VPS13D-201ENST00000011700 RPLP0P05388 317 aaKnown RBP6.04□□□□□ -1.44
VPS13D-201ENST00000011700 NPIPA8P0DM63 369 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 RPL4P36578 427 aaKnown RBP6.04□□□□□ -1.44
VPS13D-201ENST00000011700 MATKP42679 507 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 PFKFB4Q16877 469 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 AAK1Q2M2I8 961 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 LAPTM4BQ86VI4 370 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 P2RY8Q86VZ1 359 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 TMEM161BQ8NDZ6 487 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 MOAP1Q96BY2 351 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 AURKBQ96GD4 344 aaPredicted RBP6.04□□□□□ -1.44
VPS13D-201ENST00000011700 GRIP2Q9C0E4 1043 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 NKIRAS2Q9NYR9 191 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 NUDT4Q9NZJ9 180 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 OR10H1Q9Y4A9 318 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 IFNA21P01568 189 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 PIM1P11309 404 aaPredicted RBP6.04□□□□□ -1.44
VPS13D-201ENST00000011700 SEC24CP53992 1094 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 MYBPC1Q00872 1141 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 IRF8Q02556 426 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 MDC1Q14676 2089 aaKnown RBP6.04□□□□□ -1.44
VPS13D-201ENST00000011700 VWA5B1Q5TIE3 1220 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 SCIMPQ6UWF3 145 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 LRRN1Q6UXK5 716 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 PHF13Q86YI8 300 aaPredicted RBP6.04□□□□□ -1.44
VPS13D-201ENST00000011700 REXO1L1PQ8IX06 675 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 FATE1Q969F0 183 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 PHF12Q96QT6 1004 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 TMEM168Q9H0V1 697 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 CRISPLD1Q9H336 500 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 PLLPQ9Y342 182 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 IRF6O14896 467 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 DGKIO75912 1065 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 H6PDO95479 791 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 ANPEPP15144 967 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms