RNA–Protein interactions for RNA: ENSMUST00000100063.8

Scn9a-201, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 9,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-201ENSMUST00000100063 Serpinb9cI7HJI5 387 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Rgs9O54828 675 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Sar1aP36536 198 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Grik5Q61626 979 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Efr3bQ6ZQ18 817 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Rgs8Q8BXT1 180 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Wwp1Q8BZZ3 918 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 TrhdeQ8K093 1025 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Gfm1Q8K0D5 751 aaKnown RBP10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Ddx28Q9CWT6 540 aaKnown RBP10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Rex1bdQ9CYZ6 169 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Serpinb7Q9D695 380 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Vmn2r48E9Q5D8 855 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Gml2G5E8L7 176 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Epb42P49222 691 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Actr1aP61164 376 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Cpne7Q0VE82 557 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Ldoc1Q7TPY9 151 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 CyldQ80TQ2 952 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Vash1Q8C1W1 375 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Pop5Q9DB28 169 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Prkar1aQ9DBC7 381 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Fam96aQ9DCL2 160 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Usp32F8VPZ3 1604 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Kcnj12P52187 427 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Obox3Q3UT54 335 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Vil1Q62468 827 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Tmem151bQ68FE7 561 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Hbs1lQ69ZS7 682 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Olfr1418Q7TQS3 318 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Kiaa0895lQ810A5 467 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Serpinb9dQ8BMT0 377 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Slitrk6Q8C110 840 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Slc15a5Q8CBB2 566 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Ptpn4Q9WU22 926 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Gm21885A0A286YDN8 145 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 TomtA1Y9I9 258 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Skint3A7TZF0 458 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Slc27a2O35488 620 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Idh2P54071 452 aaKnown RBP10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 EpycP70186 322 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Vmn2r26Q6TAC4 855 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 WhrnQ80VW5 918 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Asnsd1Q8BFS9 627 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Efr3aQ8BG67 819 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Mrps2Q924T2 291 aaKnown RBP10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Txndc12Q9CQU0 170 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Cdh13Q9WTR5 714 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Xpr1Q9Z0U0 695 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Ighv11-1A0A075B5R6 117 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Vmn2r13L7N1X2 831 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 PtenO08586 403 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Atxn2O70305 1285 aaKnown RBP10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Ces1cP23953 554 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Aldh3a2P47740 484 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Gdi1P50396 447 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Meis3P97368 378 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Psme2P97372 239 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Itih2Q61703 946 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Svs1Q6WIZ7 820 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 DcstampQ7TNJ0 470 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 MtdhQ80WJ7 579 aaKnown RBP10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Efcab3Q80X60 432 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Slc15a3Q8BPX9 578 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Dnali1Q8BVN8 258 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Clrn1Q8K445 232 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 SncaipQ99ME3 962 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Gpihbp1Q9D1N2 228 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Fbxl12Q9EPX5 326 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 PrebQ9WUQ2 417 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Gm5478D3Z6R0 159 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Usp17ldG5E8G2 545 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Usp17lcG5E8I7 545 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Stat6P52633 837 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Epb41l4aP52963 686 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Rpl22P67984 128 aaKnown RBP10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 LcorlQ3U285 600 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Slc39a4Q78IQ7 660 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Tubgcp5Q8BKN5 1024 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Ago3Q8CJF9 860 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Pcdha1Q91Y21 948 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Trem2Q99NH8 227 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Scnn1gQ9WU39 655 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Rpl19P84099 196 aaKnown RBP10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Rnf113a2Q14B01 337 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Nell2Q61220 819 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Fbxl19Q6PB97 674 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Lrrc20Q8CI70 184 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Lcn9Q9D267 178 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Slc15a2Q9ES07 729 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Carm1Q9WVG6 608 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 ptchd1Q14B62 888 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Snx32Q80ZJ7 404 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Polr1eQ8K202 482 aaKnown RBP10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Smap1Q91VZ6 440 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Pcdhgc3Q91XX1 934 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Pcdhb4Q91XZ6 784 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Ralgps2Q9ERD6 590 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Sh2d3cQ9QZS8 854 aa10.36□□□□□ -0.75
Scn9a-201ENSMUST00000100063 Tbc1d16A2ABG4 766 aa10.35□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 36.5 ms