RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Rhox6O70238 227 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Slc4a1P04919 929 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 C4bpaP08607 469 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 CatspereP0DP43 985 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Adh5P28474 374 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 NsfP46460 744 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Adamts15P59384 950 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Brinp3Q499E0 766 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Snx33Q4VAA7 574 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 WhrnQ80VW5 918 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Mis18bp1Q80WQ8 998 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Hat1Q8BY71 416 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Sfxn2Q925N2 322 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Chmp1b1Q99LU0 199 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Mrpl44Q9CY73 333 aaKnown RBP8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Zcchc12Q9CZA5 402 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Fbxo24Q9D417 589 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Ttc23lA6H6E9 458 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Gm5478D3Z6R0 159 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Gm3642K7N6V4 267 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Ccdc153P0C7Q1 202 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 AcadvlP50544 656 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 YwhagP61982 247 aaKnown RBP8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 NyxP83503 476 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Cdkl4Q3TZA2 342 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 PtprnQ60673 979 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Lrrn1Q61809 716 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Ca4Q64444 305 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Slc39a4Q78IQ7 660 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Ppp1r15bQ8BFW3 697 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Glt28d2Q8BML3 165 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Slc25a2Q99ML6 265 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Cd2bp2Q9CWK3 342 aaKnown RBP8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Pdzd11Q9CZG9 140 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Lamp5Q9D387 280 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Q9DAY5 185 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 NfkbizQ9EST8 728 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 ThegQ9JMB1 375 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 CompQ9R0G6 755 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Olfr1098A2AVB0 315 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Vmn1r34G3XA52 309 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Gsg1l2M0QWL6 290 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Tpi1P17751 299 aaKnown RBP8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Btbd3P58545 530 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Rps8P62242 208 aaKnown RBP8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 PighQ5M9N4 188 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 LppQ8BFW7 613 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Kcnk10Q8BUW1 535 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Znf426Q8R1D1 550 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Osbpl1aQ91XL9 950 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Ndufaf1Q9CWX2 328 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Anxa9Q9JHQ0 345 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Tlr2Q9QUN7 784 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Sult1b1Q9QWG7 299 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Fbxo17Q9QZM8 286 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 H2-T24F8VQG4 363 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Rasd1O35626 280 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Ier2P17950 221 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 U2af2P26369 475 aaKnown RBP8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Cdh4P39038 913 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Cxcr5Q04683 374 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Ttc39dQ0VF76 604 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Tmem104Q3TB48 496 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Frmd8Q3UFK8 466 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Myo19Q5SV80 963 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Ift20Q61025 132 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Fam69cQ8BQT2 410 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Fndc3aQ8BX90 1198 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Ttc24Q8BYG0 334 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Ska3Q8C263 411 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Angptl8Q8R1L8 198 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Rab27bQ99P58 218 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Ptp4a3Q9D658 173 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 LrmdaQ9D9B4 229 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Pidd1Q9ERV7 915 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Prss51A0A286YDY8 319 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Zfp40B1B1D3 796 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Vmn2r3H3BJ88 915 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Vmn2r88L7N1W8 857 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Vmn2r39L7N2E5 861 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Slc7a2P18581 657 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Il15P48346 162 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Adamts19P59509 1210 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Hyal4Q05A56 481 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Tctn2Q2MV57 700 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Fam172aQ3TNH5 417 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 RbfaQ6P3B9 350 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Ubfd1Q78JW9 368 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Slitrk3Q810B9 980 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Shc2Q8BMC3 573 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Mzt1Q8BUR9 78 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Bmt2Q8BXK4 403 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Rrnad1Q8BZG5 475 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 TiparpQ8C1B2 657 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Zim1Q8C393 579 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Q8CCC3 530 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Tmprss3Q8K1T0 453 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Hkdc1Q91W97 915 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Socs4Q91ZA6 436 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Mmtag2Q99LX5 260 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 21.8 ms