RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Herc6F2Z461 1003 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gm3139J3QK78 481 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gm3106J3QPH3 481 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 MbP04247 154 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Hk1P17710 974 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gli1P47806 1111 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Scn1bP97952 218 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Cpsf6Q6NVF9 551 aaKnown RBP10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Bnip1Q6QD59 228 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Rell1Q8K2J7 272 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Fndc5Q8K4Z2 209 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Mcfd2Q8K5B2 145 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Eif3mQ99JX4 374 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Pgm3Q9CYR6 542 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Serpinb1aQ9D154 379 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Tchhl1Q9D3P1 638 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 4933425L06RikQ9D3Z8 585 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Znf354bQ9QXT9 601 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Epb41l1Q9Z2H5 879 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Slc23a1Q9Z2J0 605 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Tjp1P39447 1745 aaKnown RBP10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Cfap44E9Q5M6 1843 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Tnks1bp1P58871 1720 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gm8180E9PXN0 145 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gm8334F7CD45 553 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gm5145F8VQ88 278 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Fam181aJ3QNB7 292 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 GhrP16882 650 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Myl12bQ3THE2 172 aaKnown RBP10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Znf185Q62394 352 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 PdgfrlQ6PE55 375 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Mterf2Q8BKY8 385 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Coq6Q8R1S0 476 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Cyp4f13Q99N19 523 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Mrps17Q9CQE3 120 aaKnown RBP10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Det1Q9D0A0 550 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gpihbp1Q9D1N2 228 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Acbd7Q9D258 88 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Nos1apQ9D3A8 503 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Q9D979 236 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Akr1a1Q9JII6 325 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Thap11Q9JJD0 305 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Padi3Q9Z184 664 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gm6509A0A0J9YUV1 481 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Zfp938E9Q9G3 579 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gm6351K9J7D1 481 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Tnfsf4P43488 198 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Rps7P62082 194 aaKnown RBP10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Cab39Q06138 341 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 CrtamQ149L7 389 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gpsm3Q3U1Z5 159 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Fam20cQ5MJS3 579 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 MogQ61885 246 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Olfr1152Q7TR34 310 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Adam29Q811Q4 763 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Noc4lQ8BHY2 516 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 C1qtnf7Q8BVD7 289 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Clic5Q8BXK9 251 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Slitrk6Q8C110 840 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Pex5lQ8C437 567 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Lin52Q8CD94 116 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Irak4Q8R4K2 459 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Olfr606Q8VGZ8 319 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Cntd1Q9D995 334 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Ap1m2Q9WVP1 423 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Mllt3A2AM29 569 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Phf11A6H5X4 337 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gm16494E9Q2Z4 87 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Pgbd1E9Q492 415 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 OsmrO70458 971 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 GcatO88986 416 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 P01650 108 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 P01653 108 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Prdx3P20108 257 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Trpv5P69744 723 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Sec31bQ3TZ89 1158 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Vps72Q62481 368 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Dnajc15Q78YY6 149 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Fam205cQ80YD3 371 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Pex26Q8BGI5 305 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 FicdQ8BIX9 458 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Fbxo30Q8BJL1 746 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Rbm4Q8C7Q4 361 aaKnown RBP10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Zswim3Q8CFL8 695 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Rbm4bQ8VE92 357 aaKnown RBP10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Pcdhga4Q91XY4 930 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Prps2Q9CS42 318 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Pfdn1Q9CWM4 122 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Wdr55Q9CX97 388 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Isl2Q9CXV0 359 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Med20Q9R0X0 212 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gipc2Q9Z2H7 314 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Akap11E9Q777 1895 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Klhdc7bA0A286YD60 1263 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Eif2b3B1AUN2 452 aaKnown RBP10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gm10720D3Z1I5 223 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gm10717D3Z1I8 228 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gm29394H3BIW7 199 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Cyp4a14O35728 507 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Suv39h1O54864 412 aa10.24□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms