RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Tor1bQ9ER41 336 aa16.14■□□□□ 0.17
Trim28-201ENSMUST00000005705 Msgn1Q9JK54 188 aa16.14■□□□□ 0.17
Trim28-201ENSMUST00000005705 4933424G06RikA0A140LIP3 267 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Olfr675A0A1B0GSE1 317 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Mcf2A2AEU1 1111 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 MntO08789 591 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Cdk2ap1O35207 114 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 CcnfP51944 777 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Lsm3P62311 102 aaKnown RBP16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Flot2Q60634 428 aaKnown RBP16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Pou4f2Q63934 411 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Gpr17Q6NS65 339 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Suz12Q80U70 741 aaKnown RBP16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Tex13c3Q810P0 219 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Camk1dQ8BW96 385 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Grsf1Q8C5Q4 479 aaKnown RBP16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Plcl2Q8K394 1128 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Akr1c13Q8VC28 323 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Lmcd1Q8VEE1 365 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Zfp617Q91WM0 559 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 LrgukQ9D5S7 820 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Pou5f2Q9DAC9 329 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Cyp4v2Q9DBW0 525 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Arih2Q9Z1K6 492 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Col11a1Q61245 1804 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Gm12248A0A1W2P8B8 313 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Gm10477F6SW83 55 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 LctF8VPT3 1931 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Vmn1r76F8VQ63 324 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Vmn2r57L7N269 863 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Dmp1O55188 503 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Vmn2r1O70410 912 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 HunkO88866 714 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Il1rnP25085 178 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Ncf4P97369 339 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 AnpepP97449 966 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Wbp2P97765 261 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Sh2d1b2Q45HK4 132 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 WhammQ571B6 793 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Lrrc8bQ5DU41 803 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 TsnQ62348 228 aaKnown RBP16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Olfr366Q7TRY4 309 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Prickle2Q80Y24 845 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Pex26Q8BGI5 305 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Trmt2bQ8BQJ6 493 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Acsm2Q8K0L3 575 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Zdhhc12Q8VC90 267 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Tchhl1Q9D3P1 638 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Extl1Q9JKV7 669 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Adgra2Q91ZV8 1336 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Slc6a21A0A1B0GSD2 748 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Zar1lC3VD30 291 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Vsig10lD3YZF7 868 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Cd4P06332 457 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Psmd3P14685 530 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Drd4P51436 387 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Smpdl3bP58242 456 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Hspa8P63017 646 aaKnown RBP16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Cd163Q2VLH6 1121 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Spryd7Q3TFQ1 196 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Serac1Q3U213 654 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Rasa4Q6PFQ7 802 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 FicdQ8BIX9 458 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 MylipQ8BM54 445 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Nup54Q8BTS4 510 aaKnown RBP16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Tprg1Q8CB49 279 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Vmn1r205Q8R276 316 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Pcdhga4Q91XY4 930 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Dio3Q91ZI8 304 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 S100a14Q9D2Q8 104 aa16.13■□□□□ 0.17
Trim28-201ENSMUST00000005705 Sult2a6B2RVI8 285 aa16.12■□□□□ 0.17
Trim28-201ENSMUST00000005705 Adh6aE9Q5Z6 375 aa16.12■□□□□ 0.17
Trim28-201ENSMUST00000005705 Grin2cQ01098 1239 aa16.12■□□□□ 0.17
Trim28-201ENSMUST00000005705 Mrm3Q5ND52 418 aa16.12■□□□□ 0.17
Trim28-201ENSMUST00000005705 Arcn1Q5XJY5 511 aaKnown RBP16.12■□□□□ 0.17
Trim28-201ENSMUST00000005705 Adora2aQ60613 410 aa16.12■□□□□ 0.17
Trim28-201ENSMUST00000005705 Rbbp7Q60973 425 aaKnown RBP16.12■□□□□ 0.17
Trim28-201ENSMUST00000005705 Mef2dQ63943 514 aa16.12■□□□□ 0.17
Trim28-201ENSMUST00000005705 Cyp4b1Q64462 511 aa16.12■□□□□ 0.17
Trim28-201ENSMUST00000005705 Zzz3Q6KAQ7 910 aa16.12■□□□□ 0.17
Trim28-201ENSMUST00000005705 Lrrc8dQ8BGR2 859 aa16.12■□□□□ 0.17
Trim28-201ENSMUST00000005705 Stx16Q8BVI5 326 aa16.12■□□□□ 0.17
Trim28-201ENSMUST00000005705 Peli3Q8BXR6 445 aa16.12■□□□□ 0.17
Trim28-201ENSMUST00000005705 Thop1Q8C1A5 687 aaKnown RBP16.12■□□□□ 0.17
Trim28-201ENSMUST00000005705 Pi4k2bQ8CBQ5 469 aa16.12■□□□□ 0.17
Trim28-201ENSMUST00000005705 MvdQ99JF5 401 aa16.12■□□□□ 0.17
Trim28-201ENSMUST00000005705 Anxa13Q99JG3 317 aa16.12■□□□□ 0.17
Trim28-201ENSMUST00000005705 Pramel1Q99MW3 458 aa16.12■□□□□ 0.17
Trim28-201ENSMUST00000005705 Ifi44lQ9BDB7 447 aa16.12■□□□□ 0.17
Trim28-201ENSMUST00000005705 Ankrd61Q9CQM6 421 aa16.12■□□□□ 0.17
Trim28-201ENSMUST00000005705 Zfp236S4R299 1847 aa16.12■□□□□ 0.17
Trim28-201ENSMUST00000005705 C7D3YXF5 845 aa16.12■□□□□ 0.17
Trim28-201ENSMUST00000005705 4930426L09RikE9Q0N7 123 aa16.12■□□□□ 0.17
Trim28-201ENSMUST00000005705 Tpst2O88856 376 aa16.12■□□□□ 0.17
Trim28-201ENSMUST00000005705 GfapP03995 430 aa16.12■□□□□ 0.17
Trim28-201ENSMUST00000005705 AdprhP54923 362 aa16.12■□□□□ 0.17
Trim28-201ENSMUST00000005705 Gp1bbP56400 206 aa16.12■□□□□ 0.17
Trim28-201ENSMUST00000005705 Rps24P62849 133 aaKnown RBP16.12■□□□□ 0.17
Trim28-201ENSMUST00000005705 Wfikkn2Q7TQN3 571 aa16.12■□□□□ 0.17
Trim28-201ENSMUST00000005705 Smarcal1Q8BJL0 910 aa16.12■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 20.9 ms